Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g0716 ATGATGTATTTTCTTATGAAACAAAAGTGCTCCCTTGCCGATGAAGTACTTGTTGCTTTGCTGCTTCGATTTCTCTTCTTCCGGCGTCAATTTTTTGTGTTGATTCCGGCCAATTACTGCTTCTTCTTGGTCGATTTCCAGAGATTAACCATGATTAATGCTATCAAGGCTGCGATCGGCGATGCCGTTCTCACTTCCATGTGGATTTTCTGTGCTTCGTCTCTTGGGGTTCTCACTTCCGTCCTGTCCTCGGCAGCCGGTGTTTATGGCCTTACGCTTCACCCGCTTCTTATCGTTACTACTCTTGTCTTCGTCCTTGTTTTCATTTTTAATATAATTGGTGCTGCTTTGGGTGGGGCTAGCTTTAATCCCACTGGTACTGCTGCTTTCTATGCTGCCGGCGTTGTTCCAACCTCTCTCTTCGCCATGGCTATCCGTTTCCCTGCTCAGGCAGCTGGTGCGGTTGCTGGTGCCCTGGCGATCAAGGAGGTGATGCCTATACAATACAAGCACATGCTTGGTGGACCTTCTTTAAAAGTTGACATTCATTCTGGAGCTACAGCTGAAGGAGTTTTGACCTTTATAATCAGTTTTGCTGTTCTTCTAATTGTAGTCAGGGGTCCTTCCAGCCCAATTATTAAAACATTGTTGCTGGCAATGACCACCGTAGCGTTAATTGTTGCTGGTTCTAGTTACACAGGACCTTCCATGAATCCTGCAAATGCGTTCGGATGGGCATATATAAACAACAGGCATGATACATGGGAGCAGTTGTATGTGTACTGGATCGCCCCCTTCATAGGAGCGATTTTGGCTGCTTGGCTTTTCAGAATCATCTTCCCACCACCACCCCCAGCCCCAGCCAAGCAGAAGAAAGCTTGA 882 46.83 MMYFLMKQKCSLADEVLVALLLRFLFFRRQFFVLIPANYCFFLVDFQRLTMINAIKAAIGDAVLTSMWIFCASSLGVLTSVLSSAAGVYGLTLHPLLIVTTLVFVLVFIFNIIGAALGGASFNPTGTAAFYAAGVVPTSLFAMAIRFPAQAAGAVAGALAIKEVMPIQYKHMLGGPSLKVDIHSGATAEGVLTFIISFAVLLIVVRGPSSPIIKTLLLAMTTVALIVAGSSYTGPSMNPANAFGWAYINNRHDTWEQLYVYWIAPFIGAILAAWLFRIIFPPPPPAPAKQKKA 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26302161 26308113 + CePI673135_04g007160.1 Cec04g0716 200198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g0716 293 Gene3D Glycerol uptake facilitator protein. 47 285 IPR023271 -
Cec04g0716 293 Pfam Major intrinsic protein 50 276 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec04g0716 293 PRINTS Major intrinsic protein family signature 142 161 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec04g0716 293 PRINTS Major intrinsic protein family signature 219 241 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec04g0716 293 PRINTS Major intrinsic protein family signature 56 75 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec04g0716 293 PRINTS Major intrinsic protein family signature 188 206 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec04g0716 293 PRINTS Major intrinsic protein family signature 259 279 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec04g0716 293 PRINTS Major intrinsic protein family signature 103 127 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec04g0716 293 FunFam Aquaporin SIP1-1 52 292 - -
Cec04g0716 293 SUPERFAMILY Aquaporin-like 47 289 IPR023271 -
Cec04g0716 293 PANTHER AQUAPORIN SIP1-1 51 292 IPR044222 GO:0015250(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0716 Cec-Chr4:26302161 Cec04g1040 Cec-Chr4:29954846 8.40E-12 dispersed
Cec04g0716 Cec-Chr4:26302161 Cec04g1036 Cec-Chr4:29927490 2.10E-10 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g0716 K09875 - csv:101220534 399.823