Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g0727 ATGGCTGCTTACGCTTTGCTCGGCGATTCCACCCCCCGTGTTAATGGTGGTTTTGATGATAGTCCTTTGACCAGCGCTTCCACAAATAGCAACGGCAGTGACGAACATAATCATCGACAAATTGTTCAAGTTCAAGTTCAGGTTGCTCAACCGCGGTTGCCGGTTGGAAAAATGGTGCGGAAGAGAATCGCGTCGGAGATGGAGATTGAAGGCGGCGGCGGCGGCGGCGGCGGTGGAGGAGGAGTTACTGCCGCTGTCCATCCACGGTTTTGCCGGCGGAGTTTAGCTTCTGATCGTTCTTTTGCAGGTGGAGAAAATAAGGCGAATGCGAATGCGAATTATTGTTCTTCAAACCCTAGCCATGGCGGTGGTAACCACTCCACTGTGCATAATTTAACCGCTCTGACGTCAGTTGTAATCGAAGGGTCAAATTTATCAAATCCTCCTTCTGGTTCTGATGCTACGGTATCTTCCACTACCTCCAACAATAATCTTCTTGATAGTACTCTTCCTGTTCTTCGTCCTCAGCCCCACCATCACCATTTGCAGAATCCTGCAGTCTGTGGTTTTTCTGGGTTGCCTTTGTTTCCACCGGAATTAAATCACCACCACAAATTAAATACTCGCAATAATCCTTTTCCCCTTCCTAATCCATCTCAGGTTCTTCATAATCCTCCCACTACTGCAACTACCTCCATTATCGCCGCCGCTTCTTCCCCTATGGATGATTCCTCCGCCACCGCTTGGATCGACGGCATCATTAAGGACTTAATCCATAGCTCCACCGCCATATCCATTCCTCAGCTCATTCAGAACGTTCGTGAGATTATCTACCCTTGTAACCCCAATCTTGCGAATCTTCTTGAGTTTCGTCTTCGTACTTTGACGGACCCTAGTGTTCCTAACTTCGCCGCTGAGGATCATCGCGTGAGGAAATCCCCCTTACCGTTGCCGCCGCCGGTGGCTGGGCTGGGGTTGCAGCAGAGGCAGTTCAACCAAGAGCAGCATGAGCAAGAACAGGATTGTTCTGGATTGAAGCTTAATCTCGATTCTTCTTCTCTGCATAATCTTCCTAATTTTCCCTCTCAACCGCCGTTTCATGAGCCGTATCTTCAATGGGGAACAACCCCTCCTCCGGTCCCCACTCCCTCCGCCGCTGCCGCCGGTGAGGATGCCTTACAGCGCCTCCCTGGTCATCATCAACTTAATCTCTCTTCCGTTACACCATCGTCGCTTGTTTCTCTAAACCATGTCCCTTCAAAGCCACAATCGGAACAGCAGAACTCTTGTCCGGTCAATGCAAAGGCAGCGGTGGCACAGCCAGCTCCAGCGCCACCGCCGTCCACGAGCAATAACCCTTCAGCAACTGCTTTGCTGATTAGAGAGATAAAAGAGGAGATGAGGCAACAGAAGAGAGACGAAGAAGGGTTACACCTCTTGACTTTGCTTCTTCAATGTGCAGAAGCAGTTTCTGCTGATAATTTAGAAGAAGCCAACAAGATGCTCTTGGAAATCTCCGAGTTATCAACACCGTTCGGCACATCGGCGCAGAGGGTGGCGGCGTATTTCTCAGAAGCAATGTCGGCGAGGCTTGTGAGCTCTTGTTTAGGCATATATGCAGCTCTGCCGCCGTCGTTGGTGCCTCATACACACAGCCAGAAAATAGCCTCAGCCTTCCAAGTCTTCAATGGCATAAGCCCATTTGTCAAATTCTCACACTTCACAGCCAATCAAGCCATACAAGAAGCTTTCGAAAGAGAAGAGAGAGTTCACATTATAGATCTAGACATCATGCAAGGCCTTCAATGGCCTGGCTTGTTCCACATCTTGGCATCTAGACCCGGCGGACCGCCGTACGTTCGCCTTACGGGGCTGGGGACCTCTCAGGAGGTTCTTGAAGCCACTGGCAAACGCCTCACTGAATTTGCCGAGAAGCTTGGCCTTCCCTTCGATTTCTTTCCTGTGGCTGATAAAATTGGTAATTTAGACTTGGAGAGGCTCAACGTGAGCAAAAGGGAAGCCGTTGCCGTCCATTGGATGCAACATTCTCTTTATGAAGTCACTGGTTCCGATTCCAATACGCTATGGCTTTTGCAAAGATTGGCTCCAAAAGTGGTGACGGTGGTGGAACAAGATCTGAGCCACACAGGGTCTTTCTTGGGGAGATTCGTAGAGGCCATTCATTACTATTCAGCACTGTTTGACTCATTGGGTGTGAGCTATGGCGAAGAGAGTGAAGAAAGGCACTTAGTTGAGCAGCAACTATTATCAAGGGAGATCAGAAATGTCCTCGCAGTCGGAGGGCCGTCGAGGAGCGGCGAAGTGAAGTTCCAAAACTGGAGAGAAAAGCTGCAGCAATCTGGGTTTAAAGGCATTTCCCTCGCCGGAAATGCTGCAACTCAAGCCACTCTCCTCCTTGGAATGTTCCCTTCAGATGGGTATACGCTTGTGGAAGACAATGGGACTCTGAAACTTGGGTGGAAGGATCTTTGTTTGCTCACAGCCTCGGCTTGGAAACCGCCGTTTCTTCATCATGCTGCGGCGGCTGCTGCACCGGCTGCCACCAACAACCACATTCCCCGGTACTGA 2589 50.17 MAAYALLGDSTPRVNGGFDDSPLTSASTNSNGSDEHNHRQIVQVQVQVAQPRLPVGKMVRKRIASEMEIEGGGGGGGGGGGVTAAVHPRFCRRSLASDRSFAGGENKANANANYCSSNPSHGGGNHSTVHNLTALTSVVIEGSNLSNPPSGSDATVSSTTSNNNLLDSTLPVLRPQPHHHHLQNPAVCGFSGLPLFPPELNHHHKLNTRNNPFPLPNPSQVLHNPPTTATTSIIAAASSPMDDSSATAWIDGIIKDLIHSSTAISIPQLIQNVREIIYPCNPNLANLLEFRLRTLTDPSVPNFAAEDHRVRKSPLPLPPPVAGLGLQQRQFNQEQHEQEQDCSGLKLNLDSSSLHNLPNFPSQPPFHEPYLQWGTTPPPVPTPSAAAAGEDALQRLPGHHQLNLSSVTPSSLVSLNHVPSKPQSEQQNSCPVNAKAAVAQPAPAPPPSTSNNPSATALLIREIKEEMRQQKRDEEGLHLLTLLLQCAEAVSADNLEEANKMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYAALPPSLVPHTHSQKIASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSQEVLEATGKRLTEFAEKLGLPFDFFPVADKIGNLDLERLNVSKREAVAVHWMQHSLYEVTGSDSNTLWLLQRLAPKVVTVVEQDLSHTGSFLGRFVEAIHYYSALFDSLGVSYGEESEERHLVEQQLLSREIRNVLAVGGPSRSGEVKFQNWREKLQQSGFKGISLAGNAATQATLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLTASAWKPPFLHHAAAAAAPAATNNHIPRY 862
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26459704 26462717 - CePI673135_04g007270.1 Cec04g0727 200209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g0727 862 MobiDBLite consensus disorder prediction 11 37 - -
Cec04g0727 862 MobiDBLite consensus disorder prediction 413 434 - -
Cec04g0727 862 ProSiteProfiles GRAS family profile. 470 839 IPR005202 -
Cec04g0727 862 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 461 838 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0008356(PANTHER)|GO:0009630(PANTHER)|GO:0009956(PANTHER)|GO:0043565(PANTHER)|GO:0048366(PANTHER)|GO:0051457(PANTHER)|GO:0090610(PANTHER)
Cec04g0727 862 MobiDBLite consensus disorder prediction 142 168 - -
Cec04g0727 862 MobiDBLite consensus disorder prediction 17 37 - -
Cec04g0727 862 MobiDBLite consensus disorder prediction 413 454 - -
Cec04g0727 862 Pfam GRAS domain family 480 839 IPR005202 -
Cec04g0727 862 MobiDBLite consensus disorder prediction 354 386 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0727 Cec-Chr4:26459704 Cec07g1187 Cec-Chr7:27259268 8.70E-134 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29301 PF03514 GRAS 8.10E-127 CL0063 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g0727 K27742 - csv:101205286 1408.28