Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g0740 ATGTTATGGTTAAATTTTTCGTATGTTGTTGTATTGATTGTCAAGAATATTATGGCGATTAGGGTTAGGCCATTCAGCCGAATGGAAGGGTCTGGTAGCGAACCCGACTCTCATAGAGCTGCTTCCACCAGTAGTAGTTCAAGAAGGTTTGGAATGTTATCTGCCTCGAATATTATTCAGGCTCCGCTTTCTGCGCTGTTAGAGTATTCGGGTCTTCTTCGCGGCCGCCCAAGTCATCAAGAATCTGAGGCATTGATAAGTGCGCGACTGCCTTCGGGGTTTCGAGACCATCTTCGCAGCCAGATTGAAGAATCTTCGGGTGCCACTAATGATGGAGAGGTTTCGATTAGAATAATTGGGGCAGGGGAACCAGAACATGGTAGGGATGGTGCTGGACTAGTAGTTGGGCAAGCAAGGGAAGTTAGTGGTCAGAATGCGGTGTCTTTGCAATCTGTTTCGGGGTTGGCATCTGGGACCTTGGGGTCGGATCTTAGCCAGGGCAATTCTGCTACTGAACGCGGTGCAAGAGAGGGCATTCCTCAATCGATAAATGCAAATGCTGATGGAGATGCCTCGGAGGCAGCTGGGGGAAATGGCAGGGACTCTTCTTATCAGAGGTATGATATTCAACAGGCTGCTCGGGGGATTGAGCAGATTCTCCCATTTAGTTTCCTTCTACTGGTGGTCTTCATTCGACAGCATTTGCAAGGTTTCTTTGTGACAATATGGATTGCTGCTTTCATGTACAAGTCAAATGATATTTTGCGAAAACAAACAGCTTTGAAGGGGGAGAGAAAAATCTCTGTTTTGGTTGGCATTTCTCTTGCATTCACTATTCATGTTATTGGTGTGTACTGGTGGTATCAGAATGATGACCTTTTATATCCATTGATCATGCTTCCCCCAAGAGCGATTCCTCCTTTTTGGCATGCTATTTTCATCATCATGGTGAATGACACTTTGGTCCGTCAGGCAGTGATGGTGATCAAGTGTGTTCTATTAATGTATTATAAGAACAGCAGAGGCCGCAATTATCGTAAACAGGGTCAAATGTTAACTTTAGTCGAATATTTGCTGCTACTGTACCGTGCCTTATTGCCTACTCCCGTTTGGTATCGTTTCTTTTTGAACAAAGAATACGGGAGCCTATTTTCGTCACTATTGACAGGACTGTACTTAACTTTCAAACTCACATCTGTTGTCGAAAAGGTGCAATCCTTCTTTGCTGCTTTGAAAGCACTGTCACGTAAAGAGGTGCATTATGGGGCATATGCAACGTCAGAGCAGGTCAGCGCAGCTGGTGATTTGTGTGCTATTTGCCAAGAGAAGATGCATGCTCCTATCCTACTCCGATGTAAACACATATTTTGTGAAGATTGTGTATCAGAGTGGTTCGAGCGGGAACGAACGTGCCCATTGTGTAGGGCTTTGGTTAAACCCGCGGATCTCAGGTCATTTGGCGATGGATCAACAAGTCTGTTTTTCCAGCTGCTACTCTGGAGGAAGCAAAAACTGGCGCTCGTGAACTCGGAAAGGGGAATTCGAAATCGACATGTATACATAAATAGTCCTCTTTGTGCTACAGATGAGGACGGTCGATGCTCGAGAGGAGTTTTTAACCCTTTATATGCAAATTTTATGAATTTTTAG 1650 44.79 MLWLNFSYVVVLIVKNIMAIRVRPFSRMEGSGSEPDSHRAASTSSSSRRFGMLSASNIIQAPLSALLEYSGLLRGRPSHQESEALISARLPSGFRDHLRSQIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQAREVSGQNAVSLQSVSGLASGTLGSDLSQGNSATERGAREGIPQSINANADGDASEAAGGNGRDSSYQRYDIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVIKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLLLWRKQKLALVNSERGIRNRHVYINSPLCATDEDGRCSRGVFNPLYANFMNF 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26671992 26679834 - CePI673135_04g007400.1 Cec04g0740 200222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g0740 549 MobiDBLite consensus disorder prediction 160 201 - -
Cec04g0740 549 SMART ring_2 437 474 IPR001841 -
Cec04g0740 549 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 37 497 IPR044235 GO:0061630(InterPro)|GO:0061630(PANTHER)|GO:1904294(InterPro)
Cec04g0740 549 ProSiteProfiles Zinc finger RING-type profile. 437 475 IPR001841 -
Cec04g0740 549 CDD RING-HC_RNFT1-like 435 475 - -
Cec04g0740 549 ProSitePatterns Zinc finger RING-type signature. 452 461 IPR017907 -
Cec04g0740 549 Pfam Ring finger domain 436 475 IPR001841 -
Cec04g0740 549 SUPERFAMILY RING/U-box 432 480 - -
Cec04g0740 549 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 412 485 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0740 Cec-Chr4:26671992 Cec07g0594 Cec-Chr7:7636019 4.70E-157 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g0740 - - - 0.0