Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g0749 ATGGTTCACAATAACATACAAAGGCCACTCTTGGAAGAGCGCGTGGAGTTTACATCATCGTTTAGATATAGAAAAGTCAACAACCTCCGCCTGTTCAACTTCACTGAGATAGAATCTGTGATGGTTTTGGTTGTTGCTGTCAATGGCTGGGGTCTATGGGTTTCTGACGAACTCTTCAATTTCGACCTCATTCTGCTTCTTTCTCCCACAGGTATTACCTGTTTGCCGTTTGATTCTTTCAATTCGATGGATTTTGTTGATGGGTTTTGTGTTGAATTTCTAGAATGTGATTGGGTTTTTATGCCGTCTATGTGGAGGGATTGTGTTTGCCTTTTTCTGCTGTTGTGTTGTCGCTCCATGCTTCTTACTGGTGCTGCTACCACAGAGCCATCTGATGTTAAAGCATTGCTAGCAGTAAAGAGGAGTCTAATTGATCCTATGGACCAGCTTATCAGTTGGAATAAGGGAGATCCTTGCACAGATAATTGGATTGGAGTAGTATGCAGCTATTCTGATGGAGCTGTCAGGAACTTACGTGTCAAAGAACTCCAGCTATTGTACATGGACCTATCTGGAAAGTTAGCCCCTGAGATCAGCCAACTGTCCGTGCTTGAGAAGTTAAATTTCATGTGGAATAACCTAACTGGTTCAATTCCAAAGGAGATTGGCAGTATTTTGTCGCTGAAACTTTTACTCCTAAATGGAAATAAACTATCTGGTTCTCTTCCGGATGAGCTTGGTAATCTTACAAATCTCAACCGTTTCCAAGTAGATCAGAATCAAATTTCTGGGCCTATCCCAAAATCATATGCCAACTTGATCCGTGTGAAGCACCTCCACTTCAATAACAACACACTAAGTGGTGAAATTCCATCTGAGCTTTCCAAATTACCCAAGCTTATTCACTTGCTTTTGGATAACAATAACTTGTTGGGTTTGCTGTCACCAGAATTTTCGACCTTGCCAATGCTACACATTCTGCAACTTGATAATAACAACTTCGAAGGTGAAATTCCAGCATCTTATGAAAATTTTCCTAAATTAGTGAAATTAAGTCTGAGGAATTGTGGCTTGGAGGGACCGATTCCTAATTTTAGCAAGATAGCAAACCTCAGTTACTTAGATCTTAGCTGGAACCATTTTACTGGACCCATACCACCTTATAACCTCTCTTCTAGGATGACAACAATAATTTTGTCGAACAACCAGCTGAATGGATCTATACCCAGAAGTTTCTCCAATCTTCCTATCCTCCAGAAACTGTCACTTGAGAATAATTTTCTGAATGGTTCTGTACCTTCTGCTCTATGGGAGACAATGTCCTTCGAATCAAGTGCTCGACTTACACTCGATCTTCGGAACAATTCGTTCTTTGACATTTCTGGAAGCACAAACCCTCCTGCTAATGTCACCCTAAGGCTTGGAGGAAATCCAATCTGCCAAAATTTGAGCGGACAAAACTCTGACCAGTTCTGTACATCAAAAATGGTAGTGGATGGGCTTCATACAAGCTCAAGGAATTCCAGTAAAACATGTCCGGTTAGCAGTTGTCCAACGGACAGTTTCTTTGAATTAGTGCCAGACACTCCTGACCCATGCTTTTGTGCATCACCCCTTGGGATTGGATATAGGCTGAAGAGTCCAAGTTTTTCCTACTTTCCTCCATACATGCATTTATTTGAAGTGTATCTGACAAAGGAACTCGGTTTGAATAAGCACCAATTGTTAATCGATTCATACGATTGGGAAGGAGCTCGCCTGAGGATGTATCTGAAGCTTTTTCCATCATTTGATAGTGGCACTCATAAATTGGATATAACTGAGATGTTTCTCATTAAAGAACAATTTATGTCATGGAATTTTACCCCAAATGACGTGTTTGGCCCATACGAGCTTCTCAACTTCACACTCCCTGACCATTTTCAGACTGTCATTTTCGAGACAGAGAAGATGGGCATTAGTACAGGCATCCTGGCAGCCATTATAGTTGGATCTGTTTTTTGTATTCTTTTGATCGTAGCAGTAACCGTACTTCTAGTCACTAGGCATTCTAGATACCATCAGGTTTTGTCAACGAAAAATCTCTCTTCAACGATTGGTCTGAAAATTGATGGTGTAAAAGCATTTTCATTCAAAGAAGTGCAATTGGCTACTGGAAATTTCAACCGCTCAACTCAAGTTGGCCGAGGTGGTTATGGCAAGGTCTATAAAGGCATACTATCAGACAATTCAGTTGTAGCCATCAAGCGTGCAGAAGAAGGATCTTTACAAGGCCAAAAAGAATTTTTGACGGAGATAAAACTCTTATCACGATTGCATCACCGAAACTTAGTATCCCTAATCGGATATTGTGATGAAGAAGGGGAACAAATGCTGGTTTACGAGTTTATGCCGAATGGAACTTTGCGGGACTGGCTTTCTGGTTTTGAGTTTTCTGACAAAAGTAACACTACAGTAAATCTGAATTTTCGTATGAGACTACAAATTGCACTGGGTTCAGCTAAAGGTATACTGTATCTCCACACTGAAGCAAATCCTCCTATATTTCACCGAGACATCAAAGCTAGAAACATACTCCTCGATGCCAAGTTCACGGCCAAAGTGGCTGATTTTGGATTGTCACGTCTTGCTCCTGATCTGGATTTCGAGGGGGATGTTCCTGGACATATATCTACTGTTGTGAAGGGTACCCCTGGTTATCTTGATCCAGAGTACTTTTTAACCCGTAAACTGACAGACAAAAGTGATGTCTATAGCTTAGGAGTTGTGTTCTTGGAGCTCTTGACGGGTATGCACCCTATTTCGCATGGCAAAAACATCGTTCGTGAGGTAAAATTGGCACATCAAATGGGAACAATTCTTTCAATTGTAGACACCAGTTTGGGTTCTTTCGCATCTGAGTGTTTAGAGAGGTTTGTCGCTTTGGCCCTCAGTTGTTGCCATGACCATCCAGAAGAGCGGCCATCGATGCTGGTTGTGGTGAGGGAGCTGGAGAACATACTAAACATGATGCCCGACGATAGCGGCACCTTGTATTCAGACTTGTCCACAAGATCAAGTGCCAGGCTTCTATCCTCACCGACATCAACGTCGTGCATCACTCGGGACCAGTTTGCATCAGGAAGCATTTCGGGGAGCGATCTCATCAGTGATGTCATGCCAACCATCAGACCTCGATGA 3180 42.04 MVHNNIQRPLLEERVEFTSSFRYRKVNNLRLFNFTEIESVMVLVVAVNGWGLWVSDELFNFDLILLLSPTGITCLPFDSFNSMDFVDGFCVEFLECDWVFMPSMWRDCVCLFLLLCCRSMLLTGAATTEPSDVKALLAVKRSLIDPMDQLISWNKGDPCTDNWIGVVCSYSDGAVRNLRVKELQLLYMDLSGKLAPEISQLSVLEKLNFMWNNLTGSIPKEIGSILSLKLLLLNGNKLSGSLPDELGNLTNLNRFQVDQNQISGPIPKSYANLIRVKHLHFNNNTLSGEIPSELSKLPKLIHLLLDNNNLLGLLSPEFSTLPMLHILQLDNNNFEGEIPASYENFPKLVKLSLRNCGLEGPIPNFSKIANLSYLDLSWNHFTGPIPPYNLSSRMTTIILSNNQLNGSIPRSFSNLPILQKLSLENNFLNGSVPSALWETMSFESSARLTLDLRNNSFFDISGSTNPPANVTLRLGGNPICQNLSGQNSDQFCTSKMVVDGLHTSSRNSSKTCPVSSCPTDSFFELVPDTPDPCFCASPLGIGYRLKSPSFSYFPPYMHLFEVYLTKELGLNKHQLLIDSYDWEGARLRMYLKLFPSFDSGTHKLDITEMFLIKEQFMSWNFTPNDVFGPYELLNFTLPDHFQTVIFETEKMGISTGILAAIIVGSVFCILLIVAVTVLLVTRHSRYHQVLSTKNLSSTIGLKIDGVKAFSFKEVQLATGNFNRSTQVGRGGYGKVYKGILSDNSVVAIKRAEEGSLQGQKEFLTEIKLLSRLHHRNLVSLIGYCDEEGEQMLVYEFMPNGTLRDWLSGFEFSDKSNTTVNLNFRMRLQIALGSAKGILYLHTEANPPIFHRDIKARNILLDAKFTAKVADFGLSRLAPDLDFEGDVPGHISTVVKGTPGYLDPEYFLTRKLTDKSDVYSLGVVFLELLTGMHPISHGKNIVREVKLAHQMGTILSIVDTSLGSFASECLERFVALALSCCHDHPEERPSMLVVVRELENILNMMPDDSGTLYSDLSTRSSARLLSSPTSTSCITRDQFASGSISGSDLISDVMPTIRPR 1059
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26760230 26772755 - CePI673135_04g007490.1 Cec04g0749 200231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g0749 1059 FunFam Leucine-rich repeat protein kinase family protein 685 796 - -
Cec04g0749 1059 FunFam Leucine-rich repeat family protein 131 295 - -
Cec04g0749 1059 CDD STKc_IRAK 727 1000 - -
Cec04g0749 1059 Pfam Leucine Rich Repeat 227 249 IPR001611 GO:0005515(InterPro)
Cec04g0749 1059 Pfam Leucine Rich Repeat 370 387 IPR001611 GO:0005515(InterPro)
Cec04g0749 1059 Pfam Leucine Rich Repeat 276 297 IPR001611 GO:0005515(InterPro)
Cec04g0749 1059 Pfam Leucine Rich Repeat 395 415 IPR001611 GO:0005515(InterPro)
Cec04g0749 1059 ProSiteProfiles Protein kinase domain profile. 721 1001 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g0749 1059 Gene3D Ribonuclease Inhibitor 129 390 IPR032675 -
Cec04g0749 1059 Pfam Leucine rich repeat N-terminal domain 130 169 IPR013210 -
Cec04g0749 1059 ProSitePatterns Protein kinases ATP-binding region signature. 727 749 IPR017441 GO:0005524(InterPro)
Cec04g0749 1059 SUPERFAMILY L domain-like 150 486 - -
Cec04g0749 1059 PANTHER RECEPTOR-LIKE PROTEIN 55 150 998 - -
Cec04g0749 1059 ProSitePatterns Serine/Threonine protein kinases active-site signature. 848 860 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g0749 1059 SMART serkin_6 721 1004 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g0749 1059 Gene3D Phosphorylase Kinase; domain 1 692 796 - -
Cec04g0749 1059 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 797 1012 - -
Cec04g0749 1059 Pfam Protein kinase domain 722 993 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g0749 1059 Gene3D Ribonuclease Inhibitor 391 483 IPR032675 -
Cec04g0749 1059 SUPERFAMILY Protein kinase-like (PK-like) 706 1028 IPR011009 -
Cec04g0749 1059 Gene3D Transferase(Phosphotransferase) domain 1 797 1013 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0003 Cec-Chr3:62714 Cec04g0749 Cec-Chr4:26760230 2.30E-188 dispersed
Cec04g0749 Cec-Chr4:26760230 Cec10g1331 Cec-Chr10:27598337 1.60E-92 dispersed
Cec04g0749 Cec-Chr4:26760230 Cec04g0758 Cec-Chr4:26923897 6.20E-65 proximal
Cec10g2293 Cec-Chr10:37101359 Cec04g0749 Cec-Chr4:26760230 2.40E-92 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71894 PF00069 Pkinase 3.00E-46 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g0749 - - - 0.0