Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g0769 ATGGCACAATCAATTGGATATGCTGAAACAGATCCATCTGGTCGCTATGGACGGTTTAGAGAAATTCTAGGCAAAGGAGCCATGAAAACAGTATATAAAGGGTTTGATGAGATGCTTGGAATTGAAGTAGCTTGGAATCAAATCCACCTCAAAGATGTCTTCCATTCCCCTCAAGAACTACAACGTCTATACTCAGAAATTCATCTCCTCAAGAACCTCGACCACGACTCGATCATCCGGTTCTACACTTCTTGGATCGATACTCATTGCCGAACGTTCAATTTCATCACCGAAATGTTCACCTCCGGCACCCTTAGAGAGTACCGACAAAAGTATCGAAACGTCAATATCGAAGCAATCAAGAATTGGGCTCGTCAAATCCTACAAGGTCTGGCTTATCTTCATGGTCATGATCCACCCGTAATCCATAGAGACCTCAAGTGTGATAACGTATTTATCAATGGCCATCTCGGACTAGTTAAAATCGGTGACCTAGGACTTGCGACAATCCTTCATGATTCTAAATATGCCTATAGTGTCATAGGTACACCAGAATTCATGGCACCCGAGCTTTATGATGAGGAATATAATGAACTCGTGGATGTTTATTCTTTTGGGATGTGTATGATTGAGATGCTTACTTTGGAGTATCCTTATAGCGAGTGCTCTAACCCTGCTCAGATATATAAGAAAGTCACTTCAGGAAAATTGCCTAATGCATTCTATGAGATCAAAGATTTGGAGGCCCAAAGATTTGTAAGAAAATGTTTGGAGAATGTTTCAAAGAGGCTGCCTGCTAGAGAGCTCTTGCTTGATCCATTTCTAGCACCTAATTCCAACAATAACAATGCCTCTCATAATGAAGACTTACTGTCTTCATCTCTATCTCCAAAGAAATCAATGGCAAGAAGAACGCACATGGTTATTTCTGGATCAATGAATCCCAAGGATGATTCGGTTTTTCTAAAAGTGCATATCAAAGTGAATAACGGTAAATCTAAGAATGTATATTTTGCATTCGACACCAAAAACGACACCGCAATCGACGTTGCGACTGAGATGGTTAAAGAAGTGGAAATTATTAGTGATTGGGATCCATTGGAGATAGCTGTGATGATAAAGAAGGAGATATCCACATTGATTCCAGATTGGAAGGAATGGAAGTTACCCAAAAACCGCCATCAAGATAGCTTCACCTATGAACAAGACCACAAGGACAACGACAACGACGACGATGACGATGATGACGAAAACCATGAAATACCACATCCTTTTTATTATTGTTGCTCCTCTCCTTCCTCCTCCTCAAATTCTCTTCGGGGTTTCTACTCTTTAAAAGAGAGCCTCAATCATCATTTTGGAGGAATGAAGGAAACTTCTACTACCACTGAATGGTTCCAAGAGGATGTTCTCAATAATATTGATGATGATACAAGTTCTAGTTGCTCTCTCAATTCCTTCGATTACTCTGATTTAAGCTTTTACTCAAACAATGAAGATGAGTATGAATATGAATCAAATGTCAAAGGAAGTGAGCCTCAATACATCTCAACAGCCAAGCAACCTACAAGATTTTGCCCAACCATGAACATAGACACACACCCTTTGAGGCAAAAGGACACCAAAAAAATGATCGATCGAGAAATATTCGAGAGTCGATCTCGATCAAATAACTCGCATAAGCTCGTGAGAGTGAAATCAATGGTGAACCTCCATAGCGAGACATTGCATCGGTCTTTAGTAGAGATGTTGTTGAAGAAGCGCTTGTTCAATACAGTGGGTGCAATGGAGAACATTGGATACCAAAAACCATAG 1815 40.22 MAQSIGYAETDPSGRYGRFREILGKGAMKTVYKGFDEMLGIEVAWNQIHLKDVFHSPQELQRLYSEIHLLKNLDHDSIIRFYTSWIDTHCRTFNFITEMFTSGTLREYRQKYRNVNIEAIKNWARQILQGLAYLHGHDPPVIHRDLKCDNVFINGHLGLVKIGDLGLATILHDSKYAYSVIGTPEFMAPELYDEEYNELVDVYSFGMCMIEMLTLEYPYSECSNPAQIYKKVTSGKLPNAFYEIKDLEAQRFVRKCLENVSKRLPARELLLDPFLAPNSNNNNASHNEDLLSSSLSPKKSMARRTHMVISGSMNPKDDSVFLKVHIKVNNGKSKNVYFAFDTKNDTAIDVATEMVKEVEIISDWDPLEIAVMIKKEISTLIPDWKEWKLPKNRHQDSFTYEQDHKDNDNDDDDDDDENHEIPHPFYYCCSSPSSSSNSLRGFYSLKESLNHHFGGMKETSTTTEWFQEDVLNNIDDDTSSSCSLNSFDYSDLSFYSNNEDEYEYESNVKGSEPQYISTAKQPTRFCPTMNIDTHPLRQKDTKKMIDREIFESRSRSNNSHKLVRVKSMVNLHSETLHRSLVEMLLKKRLFNTVGAMENIGYQKP 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 27083098 27089361 + CePI673135_04g007690.1 Cec04g0769 200251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g0769 604 SUPERFAMILY Protein kinase-like (PK-like) 19 450 IPR011009 -
Cec04g0769 604 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 5 599 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Cec04g0769 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g0769 604 Gene3D Transferase(Phosphotransferase) domain 1 100 282 - -
Cec04g0769 604 CDD STKc_WNK 15 275 - -
Cec04g0769 604 FunFam Probable serine/threonine-protein kinase WNK1 2 98 - -
Cec04g0769 604 SMART serkin_6 17 275 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g0769 604 Gene3D Phosphorylase Kinase; domain 1 3 98 - -
Cec04g0769 604 MobiDBLite consensus disorder prediction 280 299 - -
Cec04g0769 604 Gene3D - 315 387 - -
Cec04g0769 604 FunFam probable serine/threonine-protein kinase WNK9 100 281 - -
Cec04g0769 604 ProSiteProfiles Protein kinase domain profile. 17 275 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g0769 604 Pfam Protein kinase domain 21 275 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g0769 604 MobiDBLite consensus disorder prediction 398 418 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2001 Cec-Chr2:37873036 Cec04g0769 Cec-Chr4:27083098 6.40E-166 dispersed
Cec04g0769 Cec-Chr4:27083098 Cec06g0999 Cec-Chr6:14618325 4.90E-115 dispersed
Cec04g0769 Cec-Chr4:27083098 Cec06g0622 Cec-Chr6:7000913 6.60E-120 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71899 PF00069 Pkinase 1.10E-46 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g0769 K08867 - csv:101207665 998.808