Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g0899 ATGACGGAACAACTGCAGGTGTTTGGTTCTAGGTTAAGTCCGTTCAGTCGGCGAGTGGAGTTGGCTCTCAAACTCAAAGGCATAAAATACCAATATGTGGAGGAAGACATACCCAACAAAAGCCATTTGCTTCGGAAATACAATCCACTTTACAAGAAGGTCCCTGTGCTCGTCCATAATGGAAACCCCATTGCTGAGTCTCTTGTCATCCTTGAATACATTGATGAGCATTGGAAAACCAACCCCATCTTGCCCCACCATCCTCAGGGAAGAGCTCAAGCAAGATTTTTGGCCAAGTATATTGATGACAAGTTTTTTGGTGCGTGGAGGAAAGCTGTTAGAAGTCAAAGAGAAGGGAGAGAGAAGGTTGTGAAGGCTGTGGAGGAAGCATGCAAGGCGTTGGAAGCAGTTGAGAATGAGCTTAAAAGCAACAATAAGTTCTTTGGAGGAGACAACATTGGGTTAGTGGACATTGTAGGCATCTTCATAGGCTATTGGGTTCCTATCATGCAAACAGCTCTTGGGTTTGAGATTCTGAGCAGCCACAGGTTCCCAAAACTAAGTAAATGGAGTGAAGATCTTACGAGCCATAGCGTTGTGAAGGAGATTCTCCCTCCTAAACCTGACCTTTTTGCTTATACTCAAACTCGTCTTCTATCCAAAAATCTGGCTTCTAAGCTGTGA 684 44.3 MTEQLQVFGSRLSPFSRRVELALKLKGIKYQYVEEDIPNKSHLLRKYNPLYKKVPVLVHNGNPIAESLVILEYIDEHWKTNPILPHHPQGRAQARFLAKYIDDKFFGAWRKAVRSQREGREKVVKAVEEACKALEAVENELKSNNKFFGGDNIGLVDIVGIFIGYWVPIMQTALGFEILSSHRFPKLSKWSEDLTSHSVVKEILPPKPDLFAYTQTRLLSKNLASKL 227
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 28684291 28686217 - CePI673135_04g008990.1 Cec04g0899 200381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g0899 227 Pfam Glutathione S-transferase, C-terminal domain 114 195 IPR004046 -
Cec04g0899 227 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Cec04g0899 227 Coils Coil 120 144 - -
Cec04g0899 227 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Cec04g0899 227 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Cec04g0899 227 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 216 IPR010987 -
Cec04g0899 227 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Cec04g0899 227 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 215 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Cec04g0899 227 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Cec04g0899 227 Gene3D Glutaredoxin 1 83 - -
Cec04g0899 227 FunFam Tau class glutathione S-transferase 1 86 - -
Cec04g0899 227 SFLD Main (cytGST) 2 217 - -
Cec04g0899 227 CDD GST_N_Tau 5 78 - -
Cec04g0899 227 CDD GST_C_Tau 88 217 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cec04g0899 227 Gene3D - 84 224 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0897 Cec-Chr4:28667559 Cec04g0899 Cec-Chr4:28684291 7.10E-64 dispersed
Cec04g0899 Cec-Chr4:28684291 Cec05g0289 Cec-Chr5:2371531 1.20E-47 dispersed
Cec04g0898 Cec-Chr4:28672703 Cec04g0899 Cec-Chr4:28684291 6.40E-60 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g0899 K00799 - csv:105435246 254.603