Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g0932 ATGGAAATCCATCTTCCGCCCCTGTTCTTTCTTCTCATTTTCCTCTCATTCTTCCTCTGCTGTCCTGCCAAGCGCTGCCCAGACTGCGGCCACACGCCGGTGCCGTACCCACTCAGCACAAGCCCAGATTGCGGCGACCCTCTTTACAGAGTCCGGTGCGCCGCCCCCGAACTCTGGTTCGAGTCCGTCAATGGGTCTTTCTATTTGATCACTTCCGTTAATCCGGTGGCACAGAGGCTGATCGTCCGGCCTCCAGGGTTGGCCAAAAACACCTGCGTTTCGTCGGATTTTGGTACCAGTGGTTTTTGGCTCGACACGCGCCTTCCTTTCACCATTTCCGATAGAAACACGGTTTTGCTCTACAACTGTTCGGTGGAAGTCCTCGAGAATAGTTGGAATTGTGCACCTAATAGCATCTGTCATGACTTTATCAGACAGAATCCGGTGGCAATGGCAGCGTGTAAGGTGGCGCCGACCTGCTGTTGGTACACAAGTGGCGGTTCCATGACTGCGTCTAGAATCAGGGTGCGAAAGGAGCGGTGTTCTGCTTATGAATGTTTTGTGAATTTGGGTAGTTCTGTTCCGCCGAAGAAGTGGCCGGAACCTGGGGTCGAGATTCAATGGACACCACCCCGAGAGCCGGCATGTCGTGTGGCTACGGACTGCCGGAATTGGGTGAATTCTGCTTGTTCGCCGGACCCTGCAAACGCCGGGCATAGGAGGTGCTTATGCAAGGTTCCTTTCAAGTGGGATCCTATAAATGGCTTGTGTAGTGGCAACAATTTGAAAATACAGAACAAGATAACTCACAAGAAGCACAAGAAGATGCCTGTTATTCTTGGAGCAATGGCGGGAGTATTTGTAATGGTGATTGGAGGTTCAATCATGTTTATAATTTCCAAAAGACGTCGACAGATTCCGAAGGGGAACGAGCTGAGTTCGAAACAAGTTCGTGAAGTGATTCTAACCGCCAACAGCAGTGGAAAATCGGCGAGGATGTTCACAACCAAAGAGATAGCAAAGGCTACAAACAACTTCTCCAAGGAGAATTTGCTTGGCTCTGGTGGCTATGGAGAGGTCTTCAAAGGCAACTTAGAAGATGGAACCTCAATAGCAGTTAAACGTGCAAAGTTGGGTAGCATGAAGGGTATTGATCAAATCCTGAACGAGGTTCGGATTCTTTGTCAGGTAAACCATCGATACCTCGTTCGTCTACTTGGATGTTGTCTTGAACTTGAGCAACCCCTCTTAATATATGAGTACATCTCGAATGGGAACCTGTTTGATCACCTTCATGGGAATACAAGTTCAAGCAAATGGCCACCGTTGACATTGAGTCGTCGACTCTGCATAGCTTGGCAAACAGCCGAGGGCCTTGCTTATCTCCACACTTCAGCCACACCGAGAATCTATCACCGAGACATAAAGTCGAGCAATATTCTACTAGACGAGAAGTTAAATGCCAAAGTAGCTGATTTTGGGCTGTCTAGATTGGCTATAACTGAATCAAGCCATATTACAACTGGGGCTCAGGGAACATTAGGTTATCTTGACCCAGAATATTACCTTAATTTCCAATTGACAGACAAGAGTGATGTTTATAGTTTTGGAGTTGTCATGTTGGAGCTATTGACTTCGGAGAAAGCCATTGATTTTAATAGGGAAGAGGAAGATGTAAATTTAGTAGTTTATATCAAGAAGATAATCCAAGAAGACAGATTGATGGAGGCTGTTGATCCTGTGATTAAACAGAGAGCAAGCAGAGTTGAAATGGAGATAATCAAGGCATTAGGGTCTTTAGCAGCAGCTTGCTTGGATGAAAAGAGGCAGAATAGACCTGCCATGAAAGAAGTTGCTGATGAGCTAGCCAATATTATTTCCATTCTTAATAATGAGGTTAGAAATATTGACTAA 1914 46.34 MEIHLPPLFFLLIFLSFFLCCPAKRCPDCGHTPVPYPLSTSPDCGDPLYRVRCAAPELWFESVNGSFYLITSVNPVAQRLIVRPPGLAKNTCVSSDFGTSGFWLDTRLPFTISDRNTVLLYNCSVEVLENSWNCAPNSICHDFIRQNPVAMAACKVAPTCCWYTSGGSMTASRIRVRKERCSAYECFVNLGSSVPPKKWPEPGVEIQWTPPREPACRVATDCRNWVNSACSPDPANAGHRRCLCKVPFKWDPINGLCSGNNLKIQNKITHKKHKKMPVILGAMAGVFVMVIGGSIMFIISKRRRQIPKGNELSSKQVREVILTANSSGKSARMFTTKEIAKATNNFSKENLLGSGGYGEVFKGNLEDGTSIAVKRAKLGSMKGIDQILNEVRILCQVNHRYLVRLLGCCLELEQPLLIYEYISNGNLFDHLHGNTSSSKWPPLTLSRRLCIAWQTAEGLAYLHTSATPRIYHRDIKSSNILLDEKLNAKVADFGLSRLAITESSHITTGAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVMLELLTSEKAIDFNREEEDVNLVVYIKKIIQEDRLMEAVDPVIKQRASRVEMEIIKALGSLAAACLDEKRQNRPAMKEVADELANIISILNNEVRNID 637
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 28978495 28980594 - CePI673135_04g009320.1 Cec04g0932 200414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g0932 637 Gene3D Transferase(Phosphotransferase) domain 1 422 635 - -
Cec04g0932 637 CDD STKc_IRAK 352 625 - -
Cec04g0932 637 Pfam Protein tyrosine and serine/threonine kinase 349 622 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g0932 637 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 318 421 - -
Cec04g0932 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g0932 637 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524(InterPro)
Cec04g0932 637 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 17 625 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Cec04g0932 637 ProSiteProfiles Protein kinase domain profile. 346 625 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g0932 637 Gene3D Phosphorylase Kinase; domain 1 308 421 - -
Cec04g0932 637 SMART serkin_6 346 629 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g0932 637 FunFam Wall-associated receptor kinase-like 20 422 635 - -
Cec04g0932 637 SUPERFAMILY Protein kinase-like (PK-like) 329 622 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1603 Cec-Chr2:33581588 Cec04g0932 Cec-Chr4:28978495 1.00E-35 dispersed
Cec04g0932 Cec-Chr4:28978495 Cec11g0690 Cec-Chr11:7627726 5.60E-186 dispersed
Cec06g1331 Cec-Chr6:26684396 Cec04g0932 Cec-Chr4:28978495 6.80E-09 dispersed
Cec04g0932 Cec-Chr4:28978495 Cec10g1973 Cec-Chr10:34510559 1.20E-153 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71904 PF07714 PK_Tyr_Ser-Thr 3.10E-46 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g0932 - - - 0.0