Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g0937 ATGGCTTCTTCTTTTTTGTTCATCAAAATTTTCTTACCTCTAATTTTTCTCTCCACCCAAACCCTATCTTCACAGCATTTTACGCCTCTCCAATTCAGTAGTTCCACCTGTTTTGCCTTCTGCATCATCCCCGAGAACGACGGCGGCCATGGCTTCACTTTTGCCATTGTCCCTTCTGAAGATCTCAGAGCTATTCCTCAGAGGTTTCTTGGACTCTTCAACGAAACGAACTTCTACGGAATATCCTCAAACCATATCTTCGCTGTCGAATTTGATACTATCTACGATGTTGGGATCAAAGATCTTGATAACGATCATGTGGGGATCGATTTAAACAGCTTGATTTCGAATATCTCTGTTCACGCTGCATATTTTGACGATTTGGGTAAAGTTCATAATCTCTCACTCCAAAGTGGGAAGCCAATTAAAGTTTGGATTGATTATGATTCTGATGAAATCACTCTCCATGTTACGATTTCCCCACATTCTTCAAAACCCAGAAGTCCAATTCTGTCGTACAGAGTGGATCTTTCGTCAGTTTTGAATGAAGAAATGTACATTGGGTTTACTGCATCAACAGGCTTACTTTCTAGAAGCTCGCAGTACATTCTGGGGTGGAGTTTCGCCATTAATGGCCGAGCTCGAGATCTTGATCTCTATTCGCTTCCATTACCAAAAAAGAAGAAAACAGGGGAGAAAATCAGTCTTCCTGTTTATGTGTCTATAACAACAGTGAGTATTTTTGTGATCTCTGTTTTCGCTTTAGGTTTTTATCTCGTACGAAAGTACAAGAAATCCGACGAAATCGAGCCGTGGGAGCTTCAAATAGGACCCCATCGATATTCCTACAGAGAACTAAAAAAGGCTACAAGAAATTTCAGCGAGAAGGAGGTTCTTGGGTATGGCGGATCTGGGAAAGTATACAGAGGAATCCTTCCGATTTCGAAAACCCAAATCGCCGTTAAGCGAATTTCTCGCGATTCTAAACAGGGTCTCCGGGAATTCGTGACGGAAATCGCCACAATCGGAATGCTCCGTCATCGAAATCTGGTTCAGTTGCTTGGATGGTGTCGGCGGCAGCAAGATCTGCTTCTGGTTTACGAATTTATGGAGAATGGGAGCTTAGATAATTACCTATTCGACAATCCAAGAACAATTCTGAATTGGGAACAGAGATTCAAAGTAATAAAGGGGGTTGCCTCTGCTTTGCTTTATCTTCACGAGGGGTATAAACAGGTGGTGATTCACAGAGACGTGAAGGCCAGCAATGTGTTATTAGACGACGAATTGAACGGAAGATTGGCGGATTTCGGGCTAGCGAAGGTGTACGAACACGGATCGGCTCCGGATACGACTCGGGTTGTTGGAACTTTGGGGTATTTGGCGCCGGAGTTGTCGAGAACGGGGAAATCGACGACGTGCTCAGACGTATATGCGTTCGGGGCTCTGATGTTGGAAGTGGCTTGTGGGCGGCGGCCGGTGGAGGTGAAGGCGTTGCCGGAGGAGATGACGTTGGTGGATTGGGTTTGGGATAAATACAGAGAAGGGCAGCTTTTGGGCGTCGTGGATCCGAAGCTCCGGGGAGTTTATGACGAAGTTGAGGTGGCGATGGTGTTGAAATTGGGGGTTATGTGTTCGAATAATGAGCCAAAGCAACGGCCGAGTATGAGGCAAGTTGTGCGGTGTTTGGACGGAGAAATTGGCGTCGCCGACGAGTGGAAGGCGCCCAGTGGGGGAAGTAATGGAGGGGCGGTGGGGGATTTTCTTGGGTGCTTAACGTCTTCGTCGATTAGTGGAGAAAGCTCAGGTTAA 1812 46.03 MASSFLFIKIFLPLIFLSTQTLSSQHFTPLQFSSSTCFAFCIIPENDGGHGFTFAIVPSEDLRAIPQRFLGLFNETNFYGISSNHIFAVEFDTIYDVGIKDLDNDHVGIDLNSLISNISVHAAYFDDLGKVHNLSLQSGKPIKVWIDYDSDEITLHVTISPHSSKPRSPILSYRVDLSSVLNEEMYIGFTASTGLLSRSSQYILGWSFAINGRARDLDLYSLPLPKKKKTGEKISLPVYVSITTVSIFVISVFALGFYLVRKYKKSDEIEPWELQIGPHRYSYRELKKATRNFSEKEVLGYGGSGKVYRGILPISKTQIAVKRISRDSKQGLREFVTEIATIGMLRHRNLVQLLGWCRRQQDLLLVYEFMENGSLDNYLFDNPRTILNWEQRFKVIKGVASALLYLHEGYKQVVIHRDVKASNVLLDDELNGRLADFGLAKVYEHGSAPDTTRVVGTLGYLAPELSRTGKSTTCSDVYAFGALMLEVACGRRPVEVKALPEEMTLVDWVWDKYREGQLLGVVDPKLRGVYDEVEVAMVLKLGVMCSNNEPKQRPSMRQVVRCLDGEIGVADEWKAPSGGSNGGAVGDFLGCLTSSSISGESSG 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 29048940 29050875 - CePI673135_04g009370.1 Cec04g0937 200419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g0937 603 Gene3D - 16 218 - -
Cec04g0937 603 ProSitePatterns Protein kinases ATP-binding region signature. 299 322 IPR017441 GO:0005524(InterPro)
Cec04g0937 603 SUPERFAMILY Concanavalin A-like lectins/glucanases 84 359 IPR013320 -
Cec04g0937 603 FunFam serine/threonine-protein kinase PBS1-like 260 369 - -
Cec04g0937 603 SMART serkin_6 293 563 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g0937 603 PANTHER - 26 567 IPR050528 GO:0005886(PANTHER)
Cec04g0937 603 Gene3D Phosphorylase Kinase; domain 1 278 369 - -
Cec04g0937 603 FunFam L-type lectin-domain containing receptor kinase S.4 370 575 - -
Cec04g0937 603 CDD lectin_legume_LecRK_Arcelin_ConA 13 212 IPR001220 GO:0030246(InterPro)
Cec04g0937 603 SUPERFAMILY Protein kinase-like (PK-like) 275 561 IPR011009 -
Cec04g0937 603 CDD STKc_IRAK 299 565 - -
Cec04g0937 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g0937 603 Gene3D Transferase(Phosphotransferase) domain 1 370 574 - -
Cec04g0937 603 Pfam Protein tyrosine and serine/threonine kinase 296 563 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g0937 603 Pfam Legume lectin domain 32 218 IPR001220 GO:0030246(InterPro)
Cec04g0937 603 ProSiteProfiles Protein kinase domain profile. 293 567 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0937 Cec-Chr4:29048940 Cec10g2237 Cec-Chr10:36715447 1.90E-135 dispersed
Cec04g0937 Cec-Chr4:29048940 Cec04g0939 Cec-Chr4:29070372 9.40E-159 proximal
Cec10g2138 Cec-Chr10:35927231 Cec04g0937 Cec-Chr4:29048940 1.80E-198 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71905 PF00069 Pkinase 1.30E-44 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g0937 - - - 0.0