Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec04g0954 | ATGGGTAATCGTATTGGGAAGATTGGCCACTGTTTCGCCGCCGCCGGCGATATTTCCCGCCGTTATGATCCCGCCGACATTATTTCCGACCCACACGACGGGGGTTTCGGTCATTCCTTTTACTACCTCCCACCCGAACCACATACGCTCTCCTCCTCCAAAGATTTCTCCGACGACTACATCTCTCCGGCGACCATTTTCCGGTCGATTTCCGGCGCCTCTGTGAGTGCCAACGTCTCAACGCCGCTCTCCACTTCTCTTGTCGATCTCTATCCTTACAGCACGACGTTTGATCGGGCCGCAGCTTTCGATTGCTCGAATTCCTTCGCCTCCGTGCCGTTGCAGCCGGTGCCTCGCCAGTCGGTGTCGGGAAATTCCGGCGGATTCCCTTCTTCGGGTCCACTGGAGAGAGGGTTTTTATCTGGACCTTTGGCCGCCAGGACCTTCGAATCGGGTCCGATTGATCGAGTGGTTTATTCCGGTCCGATTGAGAAGGGTGGTGGACCCGAGAAATTGCAAAGGAACGTCTCTCATGGCGGCGTCGGAGACAGAGAACCGAAATCGAAAAGAAGAAGAAGAAGAAGAAGTCTTATTCGGATTCTGAAGAGAGCCATATCCAAAACCATTTCTCGAAACCAGAAGGCAGCGACTAAGAGAGTGAGAGAATCGGAATCATACAAGCATAATGAAAATGCTGCAGCTTCTGCAGCTCAGACTCAGAGCAGTGTCCATTTGAGCAGCCATGCGAGCTTGGCTCAGGAAGACGACGGCGATTATTTTCTCGGCGGTCAGAGCGTGCAGTGGGCGCAGGGGAAAGCCGGTGAGGATAGAGTTCACGTGGTGATATCGGAGGATAATGGTTGGGTTTTCGTCGGAATTTATGATGGATTCAACGGCCCTGATGCTCCTGATTACTTACTTGCTAATCTCTACACTGCCGTTCTTAAAGAACTCAAGGGTTTGATTTGGAGTGATAAGTTTGATTCGACTGCAACTTCATCTTCCATGAACTCATCCAACTCTGCTTCAATTGAGGAAGACGATCATGGAACAACTCACATGAAAAATCAGGAGAATGATCATCAATCGACAGAGAACTTCTCAGCACAAAATGGGGTTGTGAATTTGGAGGCTGATTCAGTGAGGACAAGAGAGAGAGTTTATAATACGAACTATAGGACGAGTCAGCTGATGAAGAAGGCTGATCAGAATCCAAAGAATTGGAAATGTGAATGGGAAAGGGAAAGATTAGGATTAGAGGGGAAGTTGAACAATAGACAGTTAGATCACCACCAAATATGGGATGAATCAACAGCAATCAATCATTCTGAGGTGTTGAATGCTCTGTCTCAAGCTTTGAGAAAAACAGAGGAAGCATATCTGCAGAATGCAGACAAGATGGTCACAAGAAATCCTGAGCTAGCTCTTATGGGTTCTTGTGTTTTGGTTATGTTGATGAGAGGAGAAGATGTCTACTTGATGAATGTAGGAGACAGCCGCGCAATTGTAGCACAGCAATTTGAACCGGATTTCGGGACTGGAAAGCCATACAGAGACTTAGAGAGAATCAACGAAGGAACACTACGAGTATTTGAATCCTCTAATGGAGTAGAGTTTGAAAGATTAAAAGCCTTGGCTTCCCATCAGCTTACGATGGACCACAGCACTTACACAGAGGAGGAAGTTCAGAGGATCAAGAATGCTCATCCTGATGACGCTTCCGCAATTATGAATGACAGGGTGAAAGGTTATTTGAAGATCACGCGGGCGTTCGGAGCTGGCTTTCTGAAACAGCCAAAGTGGAATGATGCATTGCTAGAGATGTTCAGAATAGACTATGTGGGAAATTCACCTTACATCACCTGTGATCCAACTCTGTGCCATTATAAACTCAGCCCAACAGACAGATTCTTGATTTTGTCCTCTGATGGACTCTACCAGTACATTACCAATGAAGAAGCTGTTGCCCAAGTAGAGTCCTTCATTGCTTCTTTTCCTGAAGGAGACCCTGCTCAAAATCTAATTGAAGAAGTATTGTTCCGAGCAGCTAAAAAATACGGAATGGACTTCCATGAGCTGCTTGATATCCCACAGGGGGAGCGGCGGAAGTACCACGATGACGTTTCGGTTTTCTTTCTAAAATATTCTTGGAAATGGAAGTCTTGGCCAGATTGCAAAAGCATCCATCACAGGCTGAGTTGTTCATTTGGTGGGTTCAGCAATGGAAAAAGTAGGGAGACAAAGGTAAGTGCCGCCCGCCAAATGCTGTGGAGAAGGAATAGATTGCTCAATTTGTCAACCAAGACAGACAGACTCGTCTCCCTTCAACAGGAGCAGAAAGGCAGGGAGAACATCAGATCTTGTATGAAGCTTGTCTATGATGGTGTCTGTTACTATCATAAATCCATGGAAAGGAGGACCAGCAGATCTCTTTTGACTTTTGCCACCGATGGATATTGA | 2460 | 46.71 | MGNRIGKIGHCFAAAGDISRRYDPADIISDPHDGGFGHSFYYLPPEPHTLSSSKDFSDDYISPATIFRSISGASVSANVSTPLSTSLVDLYPYSTTFDRAAAFDCSNSFASVPLQPVPRQSVSGNSGGFPSSGPLERGFLSGPLAARTFESGPIDRVVYSGPIEKGGGPEKLQRNVSHGGVGDREPKSKRRRRRRSLIRILKRAISKTISRNQKAATKRVRESESYKHNENAAASAAQTQSSVHLSSHASLAQEDDGDYFLGGQSVQWAQGKAGEDRVHVVISEDNGWVFVGIYDGFNGPDAPDYLLANLYTAVLKELKGLIWSDKFDSTATSSSMNSSNSASIEEDDHGTTHMKNQENDHQSTENFSAQNGVVNLEADSVRTRERVYNTNYRTSQLMKKADQNPKNWKCEWERERLGLEGKLNNRQLDHHQIWDESTAINHSEVLNALSQALRKTEEAYLQNADKMVTRNPELALMGSCVLVMLMRGEDVYLMNVGDSRAIVAQQFEPDFGTGKPYRDLERINEGTLRVFESSNGVEFERLKALASHQLTMDHSTYTEEEVQRIKNAHPDDASAIMNDRVKGYLKITRAFGAGFLKQPKWNDALLEMFRIDYVGNSPYITCDPTLCHYKLSPTDRFLILSSDGLYQYITNEEAVAQVESFIASFPEGDPAQNLIEEVLFRAAKKYGMDFHELLDIPQGERRKYHDDVSVFFLKYSWKWKSWPDCKSIHHRLSCSFGGFSNGKSRETKVSAARQMLWRRNRLLNLSTKTDRLVSLQQEQKGRENIRSCMKLVYDGVCYYHKSMERRTSRSLLTFATDGY | 819 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 29233427 | 29239028 | + | CePI673135_04g009540.1 | Cec04g0954 | 200436 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec04g0954 | 819 | MobiDBLite | consensus disorder prediction | 209 | 248 | - | - | |
Cec04g0954 | 819 | ProSiteProfiles | PPM-type phosphatase domain profile. | 260 | 715 | IPR001932 | - | |
Cec04g0954 | 819 | PANTHER | PROTEIN PHOSPHATASE 2C | 239 | 713 | IPR015655 | GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro) | |
Cec04g0954 | 819 | MobiDBLite | consensus disorder prediction | 361 | 375 | - | - | |
Cec04g0954 | 819 | Pfam | Protein phosphatase 2C | 425 | 686 | IPR001932 | - | |
Cec04g0954 | 819 | Gene3D | - | 227 | 718 | IPR036457 | - | |
Cec04g0954 | 819 | SMART | PP2C_4 | 249 | 713 | IPR001932 | - | |
Cec04g0954 | 819 | MobiDBLite | consensus disorder prediction | 330 | 345 | - | - | |
Cec04g0954 | 819 | MobiDBLite | consensus disorder prediction | 229 | 248 | - | - | |
Cec04g0954 | 819 | FunFam | Protein phosphatase 2C 29 | 406 | 722 | - | - | |
Cec04g0954 | 819 | MobiDBLite | consensus disorder prediction | 160 | 195 | - | - | |
Cec04g0954 | 819 | MobiDBLite | consensus disorder prediction | 330 | 375 | - | - | |
Cec04g0954 | 819 | CDD | PP2Cc | 434 | 710 | IPR001932 | - | |
Cec04g0954 | 819 | MobiDBLite | consensus disorder prediction | 346 | 360 | - | - | |
Cec04g0954 | 819 | SUPERFAMILY | PP2C-like | 271 | 712 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g0954 | Cec-Chr4:29233427 | Cec10g0188 | Cec-Chr10:1847266 | 1.80E-120 | dispersed | |
Cec05g0719 | Cec-Chr5:5934039 | Cec04g0954 | Cec-Chr4:29233427 | 6.50E-63 | transposed | |
Cec02g2125 | Cec-Chr2:38810974 | Cec04g0954 | Cec-Chr4:29233427 | 2.30E-196 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec04g0954 | - | - | - | 0.0 |