Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g0955 ATGGCGATCTCTGGCTTTCGAGCTCTTCTATGGTGGAGCAACAGATGGTCCAAGAAAGACTGGGCGATTGCCGCTATCTGTTTCGCTTTCATTGTTTTCGTTTTTTCCTTCCTCTCCGATTCTTGGCATGCTGAAGACAGTGGCATCAACCATAGTTTCGATCTCAATCCCGCCAATGACCCCGATTTGGTTGACCTATCTTTGCTTCAGAATGCCAAGGCAAAAGGCGCTCTATGTCTTGATGGGAGTTTGCCTGGATACCATTTTCAGAAGGGCTTTGGATCTGGTTCTACCAGCTGGGTTCTTCATATTGAGGGTGGAGGTTGGTGCGATACAGTCTCGTCTTGTTCTTCGCGGAAAATGACCCCGTTAGGTTCATCAGACTACATGGAGCGTCGTGTTCGTTTCTCTGGAATTTTAAGTAGTGATGCATCCAAAAATCCTGATTTCTATAATTGGAACAAAATCAAGATACGTTACTGTGATGGAGCATCGTTTGCAAGCCATCCTGAAGGTGAAACAAAGAATGGAGATGTACTTTATTTCAGAGGCCAGCTCATCTGGGAAGCACTTACGGATGAACTCTTATCTGTTGGCTTGTCAAAGGCTAGGCAGGCTCTTCTTTCAGGGTGCTCTGCTGGGGGCTTGGCTACCCTTATACATTGTGATGACTTCAGAGAGCTTTTACCGAAGGATGCAACTGTCAAGTGTCTGGCTGATGGTGGATTTTTCCTTGATGAGGAAGATGTTTGGGGAAATCGTACAATGAGATCTTTCTATCGTGATGTTTTCAACCTTCAGAGAACTGGTAAAAGCTTACCCAAGGACTGTACAGCTACAGACGAGCCATCTAAGTGTCTCTTTCCTCAAGAAATTATCAAACATATACACACCCCGTTGTTTCTTGTCAACCCAGCTTATGATTTTTGGCAGATACAACATGTCTTGGTGCCAAACACATTAGATCCTACTGGCTCGTGGCAAAAATGTAGGCTTAATATTCATAAATGTGACCATGCTCAGCTTGAAATTCTTCAAGGGTTCCGGGACTCTTTGCTGAAGGTGCTGAGTGACTTCAAGCACAAGAAGGAAGGAGGACTTTTTGTAAATTCTTGCTTCATCCATTGCCAAACATGGATGTCTGAGACATGGCATTCCCCCAATTCTCCAAGGATAAATAAGAGGACTATAGCAGAGGCGGTGGGTGATTGGTACTTCAAACGAAATCCAGTGAAGCTAATTGACTGCCCTTTTCCATGCAATCCTACCTGCATTCATATGGATTTTAGCCAAGCCGTTGATGTTATTAGATTCTTACGTGCTCCGAGTCAGCCATAA 1338 44.39 MAISGFRALLWWSNRWSKKDWAIAAICFAFIVFVFSFLSDSWHAEDSGINHSFDLNPANDPDLVDLSLLQNAKAKGALCLDGSLPGYHFQKGFGSGSTSWVLHIEGGGWCDTVSSCSSRKMTPLGSSDYMERRVRFSGILSSDASKNPDFYNWNKIKIRYCDGASFASHPEGETKNGDVLYFRGQLIWEALTDELLSVGLSKARQALLSGCSAGGLATLIHCDDFRELLPKDATVKCLADGGFFLDEEDVWGNRTMRSFYRDVFNLQRTGKSLPKDCTATDEPSKCLFPQEIIKHIHTPLFLVNPAYDFWQIQHVLVPNTLDPTGSWQKCRLNIHKCDHAQLEILQGFRDSLLKVLSDFKHKKEGGLFVNSCFIHCQTWMSETWHSPNSPRINKRTIAEAVGDWYFKRNPVKLIDCPFPCNPTCIHMDFSQAVDVIRFLRAPSQP 445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 29239173 29247204 - CePI673135_04g009550.1 Cec04g0955 200437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g0955 445 PANTHER NOTUM-RELATED 39 426 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Cec04g0955 445 Pfam Pectinacetylesterase 61 409 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1855 Cec-Chr3:36884390 Cec04g0955 Cec-Chr4:29239173 2.60E-122 dispersed
Cec04g0955 Cec-Chr4:29239173 Cec07g1216 Cec-Chr7:27659774 9.80E-97 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g0955 K19882 - csv:101206380 818.92