Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec04g0967 | ATGGTATTTCCTTCCATTCCATCTAATTATCTTGATCCAACAACAACCCATCAATGGCATCAGCAAACAGCAAGCCAACAATCTGGGAGTAGCAGTTTTCAGCTGGCGGGGTCACCAGCACCGCCACAAGTTCGGCCGGTGTCTATGGCAGATCGGGCTCGAATGGCGAACCTGCCAGTGCCGGAGACGGCACTGAAGTGTCCAAGATGTGAATCAACAAACACAAAGTTTTGTTACTTCAACAACTATAGCCTCTCTCAGCCCCGCCATTTCTGCAAGACCTGCCGCCGCTACTGGACCAGAGGTGGCGCTCTCAGAAGCGTCCCGGTCGGCGGCGGCTACCGCCGGAATACTAAAAGAACCAAAAGTACCTCTAAATCTCCGGTTAACTCCCAATGTCAACCTACTACTACTGAGGTTTCAGGAGGAGAAGCAATGAGATTAAATTACAATAATGCCATTTCCACACAAAATGAAGGAGCTGTGGATTCAACTCATCATCCCATTGGGATAGCCAACTTTTTAGGGTTTGATCAAATTCAATGGCGACCACAGCTTCAACTTCACCAAACACAACAGTCTCCATTGCTTGTAAATTCAGCTCGGTTGCTCGGAAATGGTGGCATCGAGGCATCGCCGAGCTATAGCATCGTCAGACAGATTCAAAAGAAGATGGAAGCGACGACGAAAATAGAGGAAGATGGGCAACAAGTAGAGATGAATGTTGCAAAGCCATTTTGGGGAGTTGTTGGAGGAAGTGATCATCGCCATTATTGGAGTGGTTTTAATCCTTCATCTTCTTCCCATTCATAA | 813 | 47.36 | MVFPSIPSNYLDPTTTHQWHQQTASQQSGSSSFQLAGSPAPPQVRPVSMADRARMANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNTKRTKSTSKSPVNSQCQPTTTEVSGGEAMRLNYNNAISTQNEGAVDSTHHPIGIANFLGFDQIQWRPQLQLHQTQQSPLLVNSARLLGNGGIEASPSYSIVRQIQKKMEATTKIEEDGQQVEMNVAKPFWGVVGGSDHRHYWSGFNPSSSSHS | 270 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 29333086 | 29334596 | - | CePI673135_04g009670.1 | Cec04g0967 | 200449 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec04g0967 | 270 | MobiDBLite | consensus disorder prediction | 22 | 45 | - | - | |
Cec04g0967 | 270 | MobiDBLite | consensus disorder prediction | 110 | 140 | - | - | |
Cec04g0967 | 270 | MobiDBLite | consensus disorder prediction | 123 | 140 | - | - | |
Cec04g0967 | 270 | Pfam | Dof domain, zinc finger | 64 | 119 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Cec04g0967 | 270 | ProSitePatterns | Zinc finger Dof-type signature. | 67 | 103 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Cec04g0967 | 270 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 52 | 188 | IPR045174 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec04g0967 | 270 | MobiDBLite | consensus disorder prediction | 22 | 38 | - | - | |
Cec04g0967 | 270 | ProSiteProfiles | Zinc finger Dof-type profile. | 65 | 119 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g0967 | Cec-Chr4:29333086 | Cec04g2017 | Cec-Chr4:38322616 | 4.20E-26 | dispersed | |
Cec10g2109 | Cec-Chr10:35744102 | Cec04g0967 | Cec-Chr4:29333086 | 3.50E-38 | wgd | |
Cec02g2134 | Cec-Chr2:38881337 | Cec04g0967 | Cec-Chr4:29333086 | 2.50E-36 | wgd | |
Cec03g0158 | Cec-Chr3:1557615 | Cec04g0967 | Cec-Chr4:29333086 | 4.40E-36 | wgd | |
Cec04g0967 | Cec-Chr4:29333086 | Cec07g0366 | Cec-Chr7:3608955 | 8.20E-38 | wgd | |
Cec04g0967 | Cec-Chr4:29333086 | Cec09g2096 | Cec-Chr9:37920979 | 3.20E-34 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29315 | PF02701 | zf-Dof | 3.50E-31 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec04g0967 | - | - | - | 0.0 |