Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g0967 ATGGTATTTCCTTCCATTCCATCTAATTATCTTGATCCAACAACAACCCATCAATGGCATCAGCAAACAGCAAGCCAACAATCTGGGAGTAGCAGTTTTCAGCTGGCGGGGTCACCAGCACCGCCACAAGTTCGGCCGGTGTCTATGGCAGATCGGGCTCGAATGGCGAACCTGCCAGTGCCGGAGACGGCACTGAAGTGTCCAAGATGTGAATCAACAAACACAAAGTTTTGTTACTTCAACAACTATAGCCTCTCTCAGCCCCGCCATTTCTGCAAGACCTGCCGCCGCTACTGGACCAGAGGTGGCGCTCTCAGAAGCGTCCCGGTCGGCGGCGGCTACCGCCGGAATACTAAAAGAACCAAAAGTACCTCTAAATCTCCGGTTAACTCCCAATGTCAACCTACTACTACTGAGGTTTCAGGAGGAGAAGCAATGAGATTAAATTACAATAATGCCATTTCCACACAAAATGAAGGAGCTGTGGATTCAACTCATCATCCCATTGGGATAGCCAACTTTTTAGGGTTTGATCAAATTCAATGGCGACCACAGCTTCAACTTCACCAAACACAACAGTCTCCATTGCTTGTAAATTCAGCTCGGTTGCTCGGAAATGGTGGCATCGAGGCATCGCCGAGCTATAGCATCGTCAGACAGATTCAAAAGAAGATGGAAGCGACGACGAAAATAGAGGAAGATGGGCAACAAGTAGAGATGAATGTTGCAAAGCCATTTTGGGGAGTTGTTGGAGGAAGTGATCATCGCCATTATTGGAGTGGTTTTAATCCTTCATCTTCTTCCCATTCATAA 813 47.36 MVFPSIPSNYLDPTTTHQWHQQTASQQSGSSSFQLAGSPAPPQVRPVSMADRARMANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNTKRTKSTSKSPVNSQCQPTTTEVSGGEAMRLNYNNAISTQNEGAVDSTHHPIGIANFLGFDQIQWRPQLQLHQTQQSPLLVNSARLLGNGGIEASPSYSIVRQIQKKMEATTKIEEDGQQVEMNVAKPFWGVVGGSDHRHYWSGFNPSSSSHS 270
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 29333086 29334596 - CePI673135_04g009670.1 Cec04g0967 200449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g0967 270 MobiDBLite consensus disorder prediction 22 45 - -
Cec04g0967 270 MobiDBLite consensus disorder prediction 110 140 - -
Cec04g0967 270 MobiDBLite consensus disorder prediction 123 140 - -
Cec04g0967 270 Pfam Dof domain, zinc finger 64 119 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Cec04g0967 270 ProSitePatterns Zinc finger Dof-type signature. 67 103 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Cec04g0967 270 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 52 188 IPR045174 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec04g0967 270 MobiDBLite consensus disorder prediction 22 38 - -
Cec04g0967 270 ProSiteProfiles Zinc finger Dof-type profile. 65 119 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0967 Cec-Chr4:29333086 Cec04g2017 Cec-Chr4:38322616 4.20E-26 dispersed
Cec10g2109 Cec-Chr10:35744102 Cec04g0967 Cec-Chr4:29333086 3.50E-38 wgd
Cec02g2134 Cec-Chr2:38881337 Cec04g0967 Cec-Chr4:29333086 2.50E-36 wgd
Cec03g0158 Cec-Chr3:1557615 Cec04g0967 Cec-Chr4:29333086 4.40E-36 wgd
Cec04g0967 Cec-Chr4:29333086 Cec07g0366 Cec-Chr7:3608955 8.20E-38 wgd
Cec04g0967 Cec-Chr4:29333086 Cec09g2096 Cec-Chr9:37920979 3.20E-34 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29315 PF02701 zf-Dof 3.50E-31 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g0967 - - - 0.0