Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g0969 ATGAATATTTGTTCCGGATTCGCTGGATGTGATGTGCAAGTGAAGGGTTGGGCAAATACATGGAGCGAGAGGGAAAGTGGGAAATCTGAAGTCTACGCCGACCTCATCTCCGCTTCTTCTTCTCTTCTTCCTTGCTATCACCGTTTCACAACTACCATAATGGCCGGCAAGGGAGAAGGTCCGGCTATCGGAATCGATCTCGGAACTACCTACTCTTGCGTTGGTGTCTGGCAACACGATCGTGTTGAGATCATTGCCAATGACCAGGGTAACAGGACTACCCCTTCGTATGTTGCCTTCACCGACACTGAGCGTTTGATCGGTGACGCTGCTAAGAACCAGGTTGCCATGAACCCGATTAACACCGTCTTTGACGCAAAGAGGTTGATCGGTAGAAGATTCAGCGACTCTTCAGTCCAAAGTGACATCAAGTTGTGGCCATTCAAGGTCATCCCTGGACCTGGTGACAAGCCCATGATTGTTGTCAGCTACAAGGGTGAAGAGAAGCAATTCGCTGCTGAAGAAATCTCTTCCATGGTTCTTATTAAGATGCGTGAAATTGCCGAAGCTTACCTCGGTTCCACAGTGAAGAATGCCGTCGTCACTGTTCCTGCTTACTTTAACGACTCTCAACGTCAAGCCACCAAGGATGCTGGTGTCATTGCTGGTCTCAACGTTATGAGAATTATCAACGAGCCCACCGCTGCTGCCATTGCCTATGGGCTTGACAAGAAAGCAACAAGTGTCGGTGAAAAGAATGTTCTGATTTTCGATCTTGGTGGTGGTACTTTTGACGTCTCTCTTCTCACCATTGAAGAGGGTATATTCGAGGTGAAGGCCACTGCTGGAGACACTCACCTTGGTGGTGAAGATTTTGACAACAGATTAGTCAACCACTTTGTCCAGGAATTCAAGAGGAAGCACAAGAAGGACATCAGTGGCAACCCAAGAGCTCTTAGAAGGCTGAGAACTTCTTGTGAGAGAGCGAAGAGAACTCTCTCGTCCACTGCTCAAACCACCATTGAGATTGATTCTTTGTACGAAGGAATTGACTTCTACTCAACCATTACTCGTGCCAGATTTGAGGAATTGAACATGGATCTTTTCAGAAAGTGTATGGAACCCGTTGAGAAGTGTTTGAGAGATGCCAAGATGGACAAGAGCACCGTCCATGATGTTGTACTTGTTGGTGGTTCTACTAGGATTCCCAAGGTCCAACAATTGTTGCAGGACTTCTTCAATGGCAAGGAGCTTTGCAAGAGCATCAACCCTGATGAAGCCGTTGCCTATGGTGCAGCAGTTCAAGCTGCCATCTTGAGCGGTGAGGGAAATGAGAAGGTGCAGGATCTTCTTCTATTGGATGTCACCCCACTTTCTCTTGGTTTGGAAACCGCTGGTGGAGTGATGACTGTTCTGATCCCAAGGAACACCACAATTCCCACAAAGAAGGAGCAAGTCTTCTCTACCTACTCCGACAACCAGCCCGGTGTGTTGATCCAAGTATACGAAGGTGAAAGAACAAGAACCCGCGACAACAACTTGCTTGGGAAATTCGAACTCTCCGGTATCCCTCCAGCTCCCAGGGGTGTTCCTCAAATCACAGTGTGCTTCGACATTGATGCCAACGGTATCTTGAACGTCTCTGCTGAAGACAAGACCACCGGACAAAAGAACAAAATCACCATTACTAATGACAAGGGTAGACTCTCCAAGGAGGAGATTGAGAAGATGGTTCAAGAAGCAGAGAAGTACAAGTCTGAGGATGAGGAGCACAAGAAGAAGGTTGAAGCCAAGAATGCTTTGGAGAACTACGCTTACAACATGAGGAACACCGTGAACGACGAGAAGATTGGTGCTAAGCTTTCCCCGGCCGACAAGAAGAAGATTGATGATGCCATCGAACAGTCGATCCAATGGCTTGATGCCAACCAGCTTGCCGAGGCAGACGAGTTTGAGGACAAAATGAAGGAGTTGGAGAGCATCTGCAACCCAATCATCGCCAAGATGTACCAAGGTGCCGGAGCTGACATGGGCGGCGGTGCTGACGACAGTGCTCCTTCTGGCGGTAGCGGTGCTGGTCCCAAGATTGAGGAAGTGGACTAA 2103 48.36 MNICSGFAGCDVQVKGWANTWSERESGKSEVYADLISASSSLLPCYHRFTTTIMAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDSSVQSDIKLWPFKVIPGPGDKPMIVVSYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVNDEKIGAKLSPADKKKIDDAIEQSIQWLDANQLAEADEFEDKMKELESICNPIIAKMYQGAGADMGGGADDSAPSGGSGAGPKIEEVD 700
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 29348872 29351858 - CePI673135_04g009690.1 Cec04g0969 200451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g0969 700 ProSitePatterns Heat shock hsp70 proteins family signature 3. 393 407 IPR018181 -
Cec04g0969 700 SUPERFAMILY Actin-like ATPase domain 251 441 IPR043129 -
Cec04g0969 700 Pfam Hsp70 protein 62 671 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Cec04g0969 700 Gene3D - 124 179 - -
Cec04g0969 700 Gene3D - 63 437 - -
Cec04g0969 700 FunFam Heat shock 70 kDa protein 124 179 - -
Cec04g0969 700 PRINTS 70kDa heat shock protein signature 422 442 - -
Cec04g0969 700 PRINTS 70kDa heat shock protein signature 390 406 - -
Cec04g0969 700 PRINTS 70kDa heat shock protein signature 262 272 - -
Cec04g0969 700 PRINTS 70kDa heat shock protein signature 89 101 - -
Cec04g0969 700 PRINTS 70kDa heat shock protein signature 449 468 - -
Cec04g0969 700 PRINTS 70kDa heat shock protein signature 111 119 - -
Cec04g0969 700 PRINTS 70kDa heat shock protein signature 61 74 - -
Cec04g0969 700 PRINTS 70kDa heat shock protein signature 199 219 - -
Cec04g0969 700 PRINTS 70kDa heat shock protein signature 530 546 - -
Cec04g0969 700 ProSitePatterns Heat shock hsp70 proteins family signature 1. 65 72 IPR018181 -
Cec04g0969 700 FunFam Heat shock 70 kDa protein 250 313 - -
Cec04g0969 700 FunFam Heat shock 70 kDa protein 592 700 - -
Cec04g0969 700 CDD HSPA1-2_6-8-like_NBD 62 440 - -
Cec04g0969 700 Gene3D - 598 672 IPR029048 -
Cec04g0969 700 MobiDBLite consensus disorder prediction 672 700 - -
Cec04g0969 700 FunFam Heat shock 70 kDa 444 598 - -
Cec04g0969 700 ProSitePatterns Heat shock hsp70 proteins family signature 2. 256 269 IPR018181 -
Cec04g0969 700 PANTHER HEAT SHOCK PROTEIN 70KDA 62 635 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro)
Cec04g0969 700 FunFam Heat shock cognate 70 kDa protein 2 372 419 - -
Cec04g0969 700 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 445 602 IPR029047 -
Cec04g0969 700 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 596 675 IPR029048 -
Cec04g0969 700 Gene3D - 245 419 - -
Cec04g0969 700 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 444 597 IPR029047 -
Cec04g0969 700 FunFam Heat shock protein 70 63 249 - -
Cec04g0969 700 Gene3D Actin; Chain A, domain 4 288 371 - -
Cec04g0969 700 SUPERFAMILY Actin-like ATPase domain 61 244 IPR043129 -
Cec04g0969 700 Coils Coil 574 594 - -
Cec04g0969 700 FunFam Heat shock 70 kDa 288 371 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0969 Cec-Chr4:29348872 Cec09g2104 Cec-Chr9:37984688 0.00E+00 dispersed
Cec08g0033 Cec-Chr8:668891 Cec04g0969 Cec-Chr4:29348872 2.50E-07 transposed
Cec04g0969 Cec-Chr4:29348872 Cec09g2097 Cec-Chr9:37940929 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g0969 K03283 - csv:101215599 1224.54