Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec04g0983 | ATGAATCCCCAAATTAGCCAATGGTGTGTCTCAGCCAAGCCTTTTTTTGCTGTAGTGTTCTTGCAGTTTGGTCTTGCAGGAATGGACATTCTGTCTAAAGCAGCTCTGAACCAAGGAATGAGCAACTATGTTCTTGTTGTTTATCGCCATGCAGTTGCCACAATTGTTATAGCTCCTTTTGCACTGATTTTTGACAAGAAAGTCAGACCAAAAATGACATTTCCAGTCTTTGCCAAGTTAATGGTCCTCAGCTTGCTAGAGCCTGTGATTGACCAAAACCTATATTTCTTGGGAATGAAGTACACAACAGCAACTTTTGCAGCTGCCATGTGCAATATTCTCCCTGCCATTACCTTTGTAATGGCTTGGATCCTCAGGCTTGAGAAGGTAAGAATCAAAAGCATCAGAAGCCAAGCTAAGATAGTAGGAACCATAGCAACAGTTGGAGGAGCCATGATGATGACACTAATAAAAGGCCCAATTTTGGAGCTATTTTGGGTTGAAGAAAGAGCAAACAATCAACAACAAAGAGGTGAAATCAGCCTTCAACATACAATCAAAGGTTCAATTATGATAACAATTGGCTGCTTCAGTTGGGCCTGTTTCATGATTCTTCAGGCAATCACTTTGAAAGCTTACCCAGCTGAGCTTTCCCTTACGGCTTGGATCTGCCTGCTGGGAACTGCGGAAGGCACTGTTTTGGCTTTGGTAATGGAAAGAGGAAACGCCGCTGTTTGGTCCATTACTTGGGGAACTAAATTGCTCGCCGCTGTCTATAGTGGGATATTTTGCTCAGGACTTGCTTATTACATTCAAGGACTAGTAATGAAAGGCAAAGGACCTGTATTTGTGACTGCCTTTAGCCCATTGAGTATGGTCATTGTGGCCATTATGAGTTCCTTCATTTTAGGCGAACGTCTTTACTTTGGAAGGATAGTTGGAGCTGGTGTGATAATTGTGGGACTATACCTTGTTGTTTGGGGAAAAAACAAAGATGGGAATTGTTCCTCAAGTAGTGAAGACTTGAAATTGCCCACACAACAAACAAAAGAAATGGAAGACAACAAGATGGAAAGTTTAACAATTGAAGAAACTAATTCAGTTGATCTAAAGAATAATATTGAGCAAAAATAA | 1134 | 41.01 | MNPQISQWCVSAKPFFAVVFLQFGLAGMDILSKAALNQGMSNYVLVVYRHAVATIVIAPFALIFDKKVRPKMTFPVFAKLMVLSLLEPVIDQNLYFLGMKYTTATFAAAMCNILPAITFVMAWILRLEKVRIKSIRSQAKIVGTIATVGGAMMMTLIKGPILELFWVEERANNQQQRGEISLQHTIKGSIMITIGCFSWACFMILQAITLKAYPAELSLTAWICLLGTAEGTVLALVMERGNAAVWSITWGTKLLAAVYSGIFCSGLAYYIQGLVMKGKGPVFVTAFSPLSMVIVAIMSSFILGERLYFGRIVGAGVIIVGLYLVVWGKNKDGNCSSSSEDLKLPTQQTKEMEDNKMESLTIEETNSVDLKNNIEQK | 377 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 29482701 | 29486014 | + | CePI673135_04g009830.1 | Cec04g0983 | 200465 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec04g0983 | 377 | Pfam | EamA-like transporter family | 187 | 326 | IPR000620 | GO:0016020(InterPro) | |
Cec04g0983 | 377 | Pfam | EamA-like transporter family | 23 | 153 | IPR000620 | GO:0016020(InterPro) | |
Cec04g0983 | 377 | PANTHER | WAT1-RELATED PROTEIN | 17 | 341 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
Cec04g0983 | 377 | MobiDBLite | consensus disorder prediction | 361 | 377 | - | - | |
Cec04g0983 | 377 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 233 | 331 | - | - | |
Cec04g0983 | 377 | MobiDBLite | consensus disorder prediction | 336 | 377 | - | - | |
Cec04g0983 | 377 | MobiDBLite | consensus disorder prediction | 346 | 360 | - | - | |
Cec04g0983 | 377 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 48 | 155 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g0983 | Cec-Chr4:29482701 | Cec07g0357 | Cec-Chr7:3487757 | 1.00E-110 | dispersed | |
Cec06g0704 | Cec-Chr6:8005190 | Cec04g0983 | Cec-Chr4:29482701 | 2.40E-69 | transposed | |
Cec04g0983 | Cec-Chr4:29482701 | Cec07g0356 | Cec-Chr7:3446176 | 1.80E-107 | wgd | |
Cec04g0983 | Cec-Chr4:29482701 | Cec09g2113 | Cec-Chr9:38091740 | 6.10E-100 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec04g0983 | - | - | - | 0.0 |