Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g0983 ATGAATCCCCAAATTAGCCAATGGTGTGTCTCAGCCAAGCCTTTTTTTGCTGTAGTGTTCTTGCAGTTTGGTCTTGCAGGAATGGACATTCTGTCTAAAGCAGCTCTGAACCAAGGAATGAGCAACTATGTTCTTGTTGTTTATCGCCATGCAGTTGCCACAATTGTTATAGCTCCTTTTGCACTGATTTTTGACAAGAAAGTCAGACCAAAAATGACATTTCCAGTCTTTGCCAAGTTAATGGTCCTCAGCTTGCTAGAGCCTGTGATTGACCAAAACCTATATTTCTTGGGAATGAAGTACACAACAGCAACTTTTGCAGCTGCCATGTGCAATATTCTCCCTGCCATTACCTTTGTAATGGCTTGGATCCTCAGGCTTGAGAAGGTAAGAATCAAAAGCATCAGAAGCCAAGCTAAGATAGTAGGAACCATAGCAACAGTTGGAGGAGCCATGATGATGACACTAATAAAAGGCCCAATTTTGGAGCTATTTTGGGTTGAAGAAAGAGCAAACAATCAACAACAAAGAGGTGAAATCAGCCTTCAACATACAATCAAAGGTTCAATTATGATAACAATTGGCTGCTTCAGTTGGGCCTGTTTCATGATTCTTCAGGCAATCACTTTGAAAGCTTACCCAGCTGAGCTTTCCCTTACGGCTTGGATCTGCCTGCTGGGAACTGCGGAAGGCACTGTTTTGGCTTTGGTAATGGAAAGAGGAAACGCCGCTGTTTGGTCCATTACTTGGGGAACTAAATTGCTCGCCGCTGTCTATAGTGGGATATTTTGCTCAGGACTTGCTTATTACATTCAAGGACTAGTAATGAAAGGCAAAGGACCTGTATTTGTGACTGCCTTTAGCCCATTGAGTATGGTCATTGTGGCCATTATGAGTTCCTTCATTTTAGGCGAACGTCTTTACTTTGGAAGGATAGTTGGAGCTGGTGTGATAATTGTGGGACTATACCTTGTTGTTTGGGGAAAAAACAAAGATGGGAATTGTTCCTCAAGTAGTGAAGACTTGAAATTGCCCACACAACAAACAAAAGAAATGGAAGACAACAAGATGGAAAGTTTAACAATTGAAGAAACTAATTCAGTTGATCTAAAGAATAATATTGAGCAAAAATAA 1134 41.01 MNPQISQWCVSAKPFFAVVFLQFGLAGMDILSKAALNQGMSNYVLVVYRHAVATIVIAPFALIFDKKVRPKMTFPVFAKLMVLSLLEPVIDQNLYFLGMKYTTATFAAAMCNILPAITFVMAWILRLEKVRIKSIRSQAKIVGTIATVGGAMMMTLIKGPILELFWVEERANNQQQRGEISLQHTIKGSIMITIGCFSWACFMILQAITLKAYPAELSLTAWICLLGTAEGTVLALVMERGNAAVWSITWGTKLLAAVYSGIFCSGLAYYIQGLVMKGKGPVFVTAFSPLSMVIVAIMSSFILGERLYFGRIVGAGVIIVGLYLVVWGKNKDGNCSSSSEDLKLPTQQTKEMEDNKMESLTIEETNSVDLKNNIEQK 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 29482701 29486014 + CePI673135_04g009830.1 Cec04g0983 200465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g0983 377 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020(InterPro)
Cec04g0983 377 Pfam EamA-like transporter family 23 153 IPR000620 GO:0016020(InterPro)
Cec04g0983 377 PANTHER WAT1-RELATED PROTEIN 17 341 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cec04g0983 377 MobiDBLite consensus disorder prediction 361 377 - -
Cec04g0983 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 331 - -
Cec04g0983 377 MobiDBLite consensus disorder prediction 336 377 - -
Cec04g0983 377 MobiDBLite consensus disorder prediction 346 360 - -
Cec04g0983 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 155 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0983 Cec-Chr4:29482701 Cec07g0357 Cec-Chr7:3487757 1.00E-110 dispersed
Cec06g0704 Cec-Chr6:8005190 Cec04g0983 Cec-Chr4:29482701 2.40E-69 transposed
Cec04g0983 Cec-Chr4:29482701 Cec07g0356 Cec-Chr7:3446176 1.80E-107 wgd
Cec04g0983 Cec-Chr4:29482701 Cec09g2113 Cec-Chr9:38091740 6.10E-100 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g0983 - - - 0.0