Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1029 ATGAAGTCTTCAAGAAGCTTTGGGATAAGAAATCTCAAATATGTTAATAAAATTAAACAAGTCCTTGAAAATGAATGCCCCAACACTGTTTCTTGTGCTGATATTATGGCTCTTGCTGCAAGAGATGCTATTGTTTTGTTGGGGGGATTAGAGATGGAAATGAAAACAGGAAGAAGAGATAGCAAAGAAAGCTATGGAGAAATAGTGGAAGAAATGATTCCAAATCATAATGACTCTCTTTCATTGGTTCTTTCTCGCTTTCAAGATATTGGCATTGATCCTCAAGCTACTGTTGCTCTTTTAGGAGCTCACTCGGTGGGTCGAGTCCATTGTGTAAACATAGTGAACCGTCTCTACCCGACCGTGGACCCGACTTTGGATCCGGATCACGCAGAATATTTAAGAGAAAGGTGCCCAAACCCGAACCCGGATCCGAAGGCAGTCCAATACGCGAGAAATGATTTGGAAACTCCGATAGTGTTGGACAACAATTTCTACAAAAACGTATTGGGGCACAAGGCCCTTTTGTTAGTGGACCAGCAATTGGGCTCAAGCCCAATAACTCTTCCTTATGTCCAACAAATGACCTCCAATAACACTTACTTTCTGGCCCAATTTGCTAGGGCTTTGCTCTTGCTGTCTGAGAACAACCCTCTCACTGATGACGAAGGAGAGATTAGAAAGGATTGTCGACGTGTCAACAATTGA 708 42.37 MKSSRSFGIRNLKYVNKIKQVLENECPNTVSCADIMALAARDAIVLLGGLEMEMKTGRRDSKESYGEIVEEMIPNHNDSLSLVLSRFQDIGIDPQATVALLGAHSVGRVHCVNIVNRLYPTVDPTLDPDHAEYLRERCPNPNPDPKAVQYARNDLETPIVLDNNFYKNVLGHKALLLVDQQLGSSPITLPYVQQMTSNNTYFLAQFARALLLLSENNPLTDDEGEIRKDCRRVNN 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 29862361 29863865 - CePI673135_04g010290.1 Cec04g1029 200511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1029 235 PRINTS Haem peroxidase superfamily signature 30 47 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1029 235 PRINTS Haem peroxidase superfamily signature 154 169 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1029 235 PRINTS Haem peroxidase superfamily signature 96 111 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1029 235 PRINTS Haem peroxidase superfamily signature 48 60 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1029 235 ProSiteProfiles Plant heme peroxidase family profile. 1 234 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1029 235 Pfam Peroxidase 6 198 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1029 235 PANTHER - 11 234 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1029 235 FunFam Peroxidase 74 213 - -
Cec04g1029 235 SUPERFAMILY Heme-dependent peroxidases 9 234 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1029 235 Gene3D Peroxidase, domain 2 74 213 - -
Cec04g1029 235 PRINTS Plant peroxidase signature 168 185 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1029 235 PRINTS Plant peroxidase signature 208 221 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1029 235 PRINTS Plant peroxidase signature 95 107 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1029 235 PRINTS Plant peroxidase signature 10 23 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1029 235 PRINTS Plant peroxidase signature 48 63 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1029 235 PRINTS Plant peroxidase signature 152 167 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1029 235 PRINTS Plant peroxidase signature 29 39 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1029 235 Gene3D - 6 234 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0455 Cec-Chr3:4895062 Cec04g1029 Cec-Chr4:29862361 3.20E-76 dispersed
Cec04g1029 Cec-Chr4:29862361 Cec07g0954 Cec-Chr7:23438909 5.40E-38 dispersed
Cec10g2048 Cec-Chr10:35220829 Cec04g1029 Cec-Chr4:29862361 1.60E-93 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1029 K00430 - csv:101221151 431.795