Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1034 ATGAAGTTTCGTGGTCTTCTTTCTAATTGTTGTTACTCTCCATCGCCGACTGCCATGGAAAATAGCCGCCACGATAGACAAGACAATGAGAGTTTTCGTGTGTACTCTTATAACGAGCTTAAGTCGGCCACCAATGGATTTAGTGGAGCGAATAAGGTTGGAGAGGGTGGATTCGGCATTGTTTACAAGGGTCGGCTTCGAGATGGCAGGAAGATTGCTGTGAAGGTGCTTTCTATTGAGGTAGAATCCATGAGAGGAGAAAGGGAGTTCATAGCTGAGTTAACTTCACTTTCTAACATTAGACATGAAAATCTGGTTGAGCTTAAAGGGTGTTATGTTGATGGAAGTAACAGATATTTGGTCTATGATTACATGGAAAACAACAGCCTTGCACATGCTCTTCAGGGTGTGAGGGAAAATAGAATGAGACTTAGTTGGCTAGCCAGAAAGGAAATTTTAATTGGAGTTGCTCGTGGGCTTGCCTATCTTCATGAGGAGGTTGAGCCGCATATAGTTCATAGAGATATAAAATCCAGCAATATACTACTCGACCATAATTTTACACCTAAAGTTGCGGATTTTGGATTGGCTAAGTTGTTGAGAGAGAACCATTCTCATGTTAGTACTCGTGTTGCTGGCACAATAGGATATCTTGCTCCAGAATATGCTGTGAGCGGCCATTTGACGCGAAAATCGGATGTCTATAGCTTCGGAGTGTTGTTGTTAGAGATTGTCAGTGGAAGAGCAACTGTTGATTTTGATTTGGAACATGGTGAGCACCATTTGGTTCAAAAGGTATGGGAACATTACAAGGCGAACGAGCTAGTAAAATTGATAGATCCCATGCTGGACATAGACTTCCGCAAAGAAGAAGCTGTTCGGTTTATGAAGATTGGTCTACTCTGTGTGCAAGAAAACACAACGAAACGACCACGAATGTCCCTTGCTTTAAGCATGTTGATGAAAGAGACCGACGTTAATGATCATAATATTTCACAACCTGGACATATTATTGACTTCATGGACATTAAAATGGGTAAAGGAAACTCGTCAACCAGCATTTTCTCCAAGGTTTCCACAGGAAATAGCTTGTAA 1095 41.55 MKFRGLLSNCCYSPSPTAMENSRHDRQDNESFRVYSYNELKSATNGFSGANKVGEGGFGIVYKGRLRDGRKIAVKVLSIEVESMRGEREFIAELTSLSNIRHENLVELKGCYVDGSNRYLVYDYMENNSLAHALQGVRENRMRLSWLARKEILIGVARGLAYLHEEVEPHIVHRDIKSSNILLDHNFTPKVADFGLAKLLRENHSHVSTRVAGTIGYLAPEYAVSGHLTRKSDVYSFGVLLLEIVSGRATVDFDLEHGEHHLVQKVWEHYKANELVKLIDPMLDIDFRKEEAVRFMKIGLLCVQENTTKRPRMSLALSMLMKETDVNDHNISQPGHIIDFMDIKMGKGNSSTSIFSKVSTGNSL 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 29908842 29910423 + CePI673135_04g010340.1 Cec04g1034 200516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1034 364 Pfam Protein kinase domain 51 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1034 364 CDD STKc_IRAK 53 322 - -
Cec04g1034 364 FunFam Putative LRR receptor-like serine/threonine-protein kinase 125 332 - -
Cec04g1034 364 FunFam Serine/threonine-protein kinase receptor 17 124 - -
Cec04g1034 364 SMART serkin_6 47 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1034 364 Gene3D Phosphorylase Kinase; domain 1 17 124 - -
Cec04g1034 364 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 25 356 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cec04g1034 364 Gene3D Transferase(Phosphotransferase) domain 1 125 335 - -
Cec04g1034 364 SUPERFAMILY Protein kinase-like (PK-like) 28 320 IPR011009 -
Cec04g1034 364 ProSiteProfiles Protein kinase domain profile. 47 301 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1034 364 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524(InterPro)
Cec04g1034 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1034 Cec-Chr4:29908842 Cec07g1165 Cec-Chr7:27046752 2.30E-99 dispersed
Cec04g1034 Cec-Chr4:29908842 Cec07g1128 Cec-Chr7:26516638 1.90E-90 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71908 PF00069 Pkinase 8.40E-50 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1034 - - - 0.0