Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1036 ATGGCAGGAGGACATATAAACCCAGCAGTGACATTTGGGCTGTTTTTGGGTCGGAAGGTTTCATTGGTTAGAGCTGCACTATACATAATGGCTCAGTGTTTGGGAGCCATTTGTGGGTGTGGGTTGGTGAAGTCATTAAAGAAGGCTAACTTCAATGCCTTCAGCGGTGGAGCCACCGAGCTAGCCGACGGCTTCAGCCCCGGTGCTGGCCTCGCCGCTGAGATCATCGGAACCTTCGTTCTTGTATACACTGTCTTCTCTGCCACCGATCCCAAAAGAAAAGCTAGAGATTCCCATGTTCCTGTTCTAGCGCCGCTCCCAATTGGGTTCGCCGTGTTCGTGGTGAATTTAGCCACGATTCCGGTCACCGGCGCCGGCATTAACCCGGCTCGAAGCTTCGGCTCTGCAGTGATGTTCAACAACCACAAAGCTTGGGATAACCATTGGATATTTTGGGTTGGACCTTTCATTGGAGCTGCAATGGCTGCAATTTACCATGAATTTGTTTTGAGAGGAGGAGCAGCTAAGACCTTGAAATCCTTCAGAACTTCCTCAATTTAA 561 49.91 MAGGHINPAVTFGLFLGRKVSLVRAALYIMAQCLGAICGCGLVKSLKKANFNAFSGGATELADGFSPGAGLAAEIIGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGFAVFVVNLATIPVTGAGINPARSFGSAVMFNNHKAWDNHWIFWVGPFIGAAMAAIYHEFVLRGGAAKTLKSFRTSSI 186
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 29927490 29929176 - CePI673135_04g010360.1 Cec04g1036 200518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1036 186 Gene3D Glycerol uptake facilitator protein. 1 186 IPR023271 -
Cec04g1036 186 PRINTS Major intrinsic protein family signature 73 91 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec04g1036 186 PRINTS Major intrinsic protein family signature 24 43 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec04g1036 186 PRINTS Major intrinsic protein family signature 149 169 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec04g1036 186 PRINTS Major intrinsic protein family signature 109 131 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec04g1036 186 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 2 182 IPR034294 GO:0005886(PANTHER)|GO:0015250(PANTHER)
Cec04g1036 186 SUPERFAMILY Aquaporin-like 2 171 IPR023271 -
Cec04g1036 186 ProSitePatterns MIP family signature. 5 13 IPR022357 -
Cec04g1036 186 Pfam Major intrinsic protein 2 166 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1036 Cec-Chr4:29927490 Cec04g1040 Cec-Chr4:29954846 5.70E-83 dispersed
Cec04g1036 Cec-Chr4:29927490 Cec04g1039 Cec-Chr4:29941518 6.40E-82 proximal
Cec04g0716 Cec-Chr4:26302161 Cec04g1036 Cec-Chr4:29927490 2.10E-10 transposed
Cec10g2040 Cec-Chr10:35154497 Cec04g1036 Cec-Chr4:29927490 1.30E-76 wgd
Cec02g2224 Cec-Chr2:39638513 Cec04g1036 Cec-Chr4:29927490 7.70E-79 wgd
Cec04g1036 Cec-Chr4:29927490 Cec08g0780 Cec-Chr8:19589521 6.60E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1036 K09872 - csv:101215842 367.466