Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec04g1036 | ATGGCAGGAGGACATATAAACCCAGCAGTGACATTTGGGCTGTTTTTGGGTCGGAAGGTTTCATTGGTTAGAGCTGCACTATACATAATGGCTCAGTGTTTGGGAGCCATTTGTGGGTGTGGGTTGGTGAAGTCATTAAAGAAGGCTAACTTCAATGCCTTCAGCGGTGGAGCCACCGAGCTAGCCGACGGCTTCAGCCCCGGTGCTGGCCTCGCCGCTGAGATCATCGGAACCTTCGTTCTTGTATACACTGTCTTCTCTGCCACCGATCCCAAAAGAAAAGCTAGAGATTCCCATGTTCCTGTTCTAGCGCCGCTCCCAATTGGGTTCGCCGTGTTCGTGGTGAATTTAGCCACGATTCCGGTCACCGGCGCCGGCATTAACCCGGCTCGAAGCTTCGGCTCTGCAGTGATGTTCAACAACCACAAAGCTTGGGATAACCATTGGATATTTTGGGTTGGACCTTTCATTGGAGCTGCAATGGCTGCAATTTACCATGAATTTGTTTTGAGAGGAGGAGCAGCTAAGACCTTGAAATCCTTCAGAACTTCCTCAATTTAA | 561 | 49.91 | MAGGHINPAVTFGLFLGRKVSLVRAALYIMAQCLGAICGCGLVKSLKKANFNAFSGGATELADGFSPGAGLAAEIIGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGFAVFVVNLATIPVTGAGINPARSFGSAVMFNNHKAWDNHWIFWVGPFIGAAMAAIYHEFVLRGGAAKTLKSFRTSSI | 186 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 29927490 | 29929176 | - | CePI673135_04g010360.1 | Cec04g1036 | 200518 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec04g1036 | 186 | Gene3D | Glycerol uptake facilitator protein. | 1 | 186 | IPR023271 | - | |
Cec04g1036 | 186 | PRINTS | Major intrinsic protein family signature | 73 | 91 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec04g1036 | 186 | PRINTS | Major intrinsic protein family signature | 24 | 43 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec04g1036 | 186 | PRINTS | Major intrinsic protein family signature | 149 | 169 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec04g1036 | 186 | PRINTS | Major intrinsic protein family signature | 109 | 131 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec04g1036 | 186 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 2 | 182 | IPR034294 | GO:0005886(PANTHER)|GO:0015250(PANTHER) | |
Cec04g1036 | 186 | SUPERFAMILY | Aquaporin-like | 2 | 171 | IPR023271 | - | |
Cec04g1036 | 186 | ProSitePatterns | MIP family signature. | 5 | 13 | IPR022357 | - | |
Cec04g1036 | 186 | Pfam | Major intrinsic protein | 2 | 166 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g1036 | Cec-Chr4:29927490 | Cec04g1040 | Cec-Chr4:29954846 | 5.70E-83 | dispersed | |
Cec04g1036 | Cec-Chr4:29927490 | Cec04g1039 | Cec-Chr4:29941518 | 6.40E-82 | proximal | |
Cec04g0716 | Cec-Chr4:26302161 | Cec04g1036 | Cec-Chr4:29927490 | 2.10E-10 | transposed | |
Cec10g2040 | Cec-Chr10:35154497 | Cec04g1036 | Cec-Chr4:29927490 | 1.30E-76 | wgd | |
Cec02g2224 | Cec-Chr2:39638513 | Cec04g1036 | Cec-Chr4:29927490 | 7.70E-79 | wgd | |
Cec04g1036 | Cec-Chr4:29927490 | Cec08g0780 | Cec-Chr8:19589521 | 6.60E-79 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec04g1036 | K09872 | - | csv:101215842 | 367.466 |