Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1056 ATGCAGAAGTTGAGACAAGTTCTTGTTGAGCACGCACTTGCAAATGGTGATGACAAAAAGAATGCAAGCAATTCAATCTTCCAAAAGATTGCTACTTTTGAGGAGGAACTAAAGGTAGTTTTACCAAAAGCAATTGAAAATACAAGGTTGGCATACGAGAGTGGAAAAGCACCTATTAAGAATCAAATTGAAGAATGCAGATCTTATCCACTATACAGATTTTTGAGGAAAGAGTTAGGAACAAATCTGTTAACAGGTGAAAAAGTGATATCTCCGGGGGAAGAATGTGAAAAGGTATTCACGGCTTTGTGTCAAGGAAAGATGATTGATTCTATCTTAGAATGTTTGAATGAGTGGAATGGCGCTCCAATTCCCATATGTTAG 384 37.24 MQKLRQVLVEHALANGDDKKNASNSIFQKIATFEEELKVVLPKAIENTRLAYESGKAPIKNQIEECRSYPLYRFLRKELGTNLLTGEKVISPGEECEKVFTALCQGKMIDSILECLNEWNGAPIPIC 127
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 30112531 30112914 - CePI673135_04g010560.1 Cec04g1056 200538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1056 127 Gene3D Fumarase/aspartase (Central domain) 59 127 - -
Cec04g1056 127 PANTHER HISTIDINE AMMONIA-LYASE 1 127 IPR001106 GO:0016841(PANTHER)|GO:0045548(PANTHER)
Cec04g1056 127 SUPERFAMILY L-aspartase-like 1 127 IPR008948 GO:0003824(InterPro)
Cec04g1056 127 Gene3D - 1 58 IPR023144 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1056 Cec-Chr4:30112531 Cec07g1305 Cec-Chr7:28583221 8.20E-57 dispersed
Cec04g1055 Cec-Chr4:30108094 Cec04g1056 Cec-Chr4:30112531 9.70E-54 tandem
Cec04g1056 Cec-Chr4:30112531 Cec04g1057 Cec-Chr4:30113893 4.10E-56 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1056 K10775 - csv:101218856 244.973