Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1084 ATGAGTGGCGCAAGATTCAGCATCAGAACTGGGCGAAGAAGACTGTCACAGATGACGAATTTCGCCTTCCAAGTTCTATTTGGCCGATGGTTCACCGTCTTCGCTTCTTTACTCATCATGTCCGTTTCCGGCGCCACCTACATGTTCGCACTCTACTCCGCTGACATCAAATCCTCCTTCAATTACGATCAGACCACTCTCAACCTCATCGGCTTCTTTAAGGATCTGGGTTCCAACGTCGGAGTCTTTTCCGGCCTCATCAATGAAATTACTCCGTCTTGGGTCGTCCTCTTCATCGGTGGGGTAATGAATTTCTTGGGCTATTTCATGATTTGGCTTTCTGTCACTCACCGAATCCCCAAACCCAAACTGCCCGCAATGTGTTTGTTTATATGCCTAGGTGCCAATTCTCAGACCTTTGCTAATACAGGGGCTTTGATCCCTTCTGTGAGGAATTTCCCCCGGAATCGAGGTAATGTATTGGGTTTATTAAAAGGGTTTGTTGGGTTAAGTGGGGCAATTTTGACTCAGATTTACCATGCTTTTTATGGGGATGATTCTAAGGATTTTATCTTGCTTATTGCTTGGCTGCCTACTGCTGTTTCTTTCCTGCTTCTTCGGATTGTTAGAGTAGTGGAAGTGAACCCAATATTTAAATCCAATGATCTAAAAAATTTCTATTCTATGCTCTACATTTCCCTTGGTCTTGCTGGCTTCCTCATGATTTTGATTATTGTTCAAAACGAGCTCATGTTTACTAGAATTCAGTATTTGGGTTGTGCGTTTGTTCTCCTAGCGTTTCTTTTTCTTCCACTTGTCGTTGTTATAAGAGAAGAATTCGCCATTAGGAAGAGGAAATTGCAAGGTGTGGATGTAACTTCTTGGCTTCCAGTTCCAACAGACCCATCTCCAGCTGAATTACCATTGCCTAGACCTTCAAGTGTGCCGACGACTGTCATAGCTTTAGCCAACCCAAGTTCTTGCTTTGAAAACGTGTTCAAACCGCCAGAAAGAGGAGAGGACTACACCATTTTACAAGCAATCTTCAGTGTAGATATGTTGATTCTGTTTGTTGCTACAATTTGTGGGGCTGGTGGGACTTTGACTGCAATGGACAACTTGGGTCAGATAGGCAGCTCCCTTGGCTACTCAACTCATACCATTTCTACTTTCACTTCTCTAGTGAGTATATGGGGCTTTCTCGGTCGAGCATTTTCGGGTTATGCTTCTGAATTCTTGTGGATGAAGTATAACTTCTCTCGCCCTCTGTTCCTCACTCTTGTGCTTCTTCTCTCTTGTGTAGGTCATCTTCTAATTGCCTCTGGAGTCCCAACCTCCCTTTATTTTGCTTCAGTTATCATTGGATTTTGCTTTGGAGCACAATGGCCATTGATTTTCGCCATTGTTTCTGAATTATTTGGCTTGAAATACTATGCAACTTTATATAGCATAAGCGGCATTGCTAGCCCAGTTGGCTCATACATTTTCAATGTGAAAGTAGCTGGCTATTTATATGACCAAGAGGCTAGAAAGCAAATGGCAGCCGTTGGTCGTAGAAGTGTAGCTGGTAGAGACTTAGATTGCAAGGGCGTCCATTGTTACAGATTAGCTTTTCTTATAATATCTGCTGCAACAGTGTTCGGTTGTGTTGTTTCATTCATTTTGGTCCTTCGAACTTGGAAATTCTATAAGGGTGATATCTATAAGAAGTTTAGAGAGGAAAGAAAGGAAGCAGAATGA 1740 42.7 MSGARFSIRTGRRRLSQMTNFAFQVLFGRWFTVFASLLIMSVSGATYMFALYSADIKSSFNYDQTTLNLIGFFKDLGSNVGVFSGLINEITPSWVVLFIGGVMNFLGYFMIWLSVTHRIPKPKLPAMCLFICLGANSQTFANTGALIPSVRNFPRNRGNVLGLLKGFVGLSGAILTQIYHAFYGDDSKDFILLIAWLPTAVSFLLLRIVRVVEVNPIFKSNDLKNFYSMLYISLGLAGFLMILIIVQNELMFTRIQYLGCAFVLLAFLFLPLVVVIREEFAIRKRKLQGVDVTSWLPVPTDPSPAELPLPRPSSVPTTVIALANPSSCFENVFKPPERGEDYTILQAIFSVDMLILFVATICGAGGTLTAMDNLGQIGSSLGYSTHTISTFTSLVSIWGFLGRAFSGYASEFLWMKYNFSRPLFLTLVLLLSCVGHLLIASGVPTSLYFASVIIGFCFGAQWPLIFAIVSELFGLKYYATLYSISGIASPVGSYIFNVKVAGYLYDQEARKQMAAVGRRSVAGRDLDCKGVHCYRLAFLIISAATVFGCVVSFILVLRTWKFYKGDIYKKFREERKEAE 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 30365522 30367261 - CePI673135_04g010840.1 Cec04g1084 200566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1084 579 Gene3D MFS general substrate transporter like domains 332 562 IPR036259 -
Cec04g1084 579 CDD MFS_Mch1p_like 28 549 - -
Cec04g1084 579 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 29 572 - GO:0016020(PANTHER)
Cec04g1084 579 Pfam Major Facilitator Superfamily 357 557 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cec04g1084 579 Pfam Nodulin-like 29 276 IPR010658 -
Cec04g1084 579 SUPERFAMILY MFS general substrate transporter 30 566 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1084 Cec-Chr4:30365522 Cec05g2349 Cec-Chr5:34731182 1.00E-186 dispersed
Cec04g0337 Cec-Chr4:13173505 Cec04g1084 Cec-Chr4:30365522 4.70E-157 transposed
Cec10g2008 Cec-Chr10:34857088 Cec04g1084 Cec-Chr4:30365522 1.00E-207 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1084 - - - 0.0