Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec04g1088 | ATGCCGATCCGTAACATTGCAATTGGAAGGCCCGAAGAGGCTACTCATCCAGATGCTTTGAAGGCTGGGTTGGCTGAGTTCATTTCCACCTTGATCTTTGTTTTTGCTGGCCAAGGTTCCGGCATAGCCTTCAGTAAGCTTACCGAAGGCGGCGCCACCACTCCCGCCGGTCTCATCTCCGCCTCCATCGCCCACGCCTTTGCCCTTTTTGTTGCCGTCTCCGTTGGCGCTAACATCTCTGGTGGCCATGTCAACCCCGCCGTTACCTTCGGTGCTTTCGTCGGTGGTAACATCACCCTCCTACGTGGCATCATCTACTGGATTGCTCAACTCCTTGGATCCGTTGTCGCTTGCTTGCTCCTTAAATTCGTCACCGGCTTGCCCACCGGAAGCTTCGCTCTGTCAGCTGGAGTTGGAGAAATTAACGCCTTCGTTTTCGAGATCGTAATGACCTTCGGATTGGTGTACACAGTGTACGCGACCGCAGTGGATCCCAAGAAGGGCAGTTTGGGAACTATTGCACCCATCGCAATCGGTTTCATCGTCGGAGCTAACATTTTGGCCGGCGGAGCATTCACCGGAGCATCCATGAACCCGGCCGTGGCCTTCGGCCCATCAGTAGTGAGCTGGTCATGGAGCAACCACTGGGTCTACTGGGCCGGGCCTCTGATCGGAGGTGGGCTCGCTGGTCTCATCTACGAGTTCATCTTCATTTCCAACACCCACGAGCAGCTCCCAACCACCGACTACTAA | 753 | 55.38 | MPIRNIAIGRPEEATHPDALKAGLAEFISTLIFVFAGQGSGIAFSKLTEGGATTPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIIYWIAQLLGSVVACLLLKFVTGLPTGSFALSAGVGEINAFVFEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILAGGAFTGASMNPAVAFGPSVVSWSWSNHWVYWAGPLIGGGLAGLIYEFIFISNTHEQLPTTDY | 250 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 30392241 | 30393477 | - | CePI673135_04g010880.1 | Cec04g1088 | 200570 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec04g1088 | 250 | Gene3D | Glycerol uptake facilitator protein. | 4 | 250 | IPR023271 | - | |
Cec04g1088 | 250 | Pfam | Major intrinsic protein | 14 | 233 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec04g1088 | 250 | CDD | MIP | 21 | 236 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec04g1088 | 250 | FunFam | Probable aquaporin TIP1-1 | 4 | 250 | - | - | |
Cec04g1088 | 250 | SUPERFAMILY | Aquaporin-like | 13 | 246 | IPR023271 | - | |
Cec04g1088 | 250 | ProSitePatterns | MIP family signature. | 83 | 91 | IPR022357 | - | |
Cec04g1088 | 250 | PRINTS | Major intrinsic protein family signature | 102 | 121 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec04g1088 | 250 | PRINTS | Major intrinsic protein family signature | 146 | 164 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec04g1088 | 250 | PRINTS | Major intrinsic protein family signature | 216 | 236 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec04g1088 | 250 | PRINTS | Major intrinsic protein family signature | 65 | 89 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec04g1088 | 250 | PRINTS | Major intrinsic protein family signature | 179 | 201 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec04g1088 | 250 | PRINTS | Major intrinsic protein family signature | 21 | 40 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec04g1088 | 250 | PANTHER | AQUAPORIN-8 | 5 | 246 | IPR034294 | GO:0006833(PANTHER)|GO:0009705(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g1088 | Cec-Chr4:30392241 | Cec05g2318 | Cec-Chr5:34482005 | 1.40E-28 | dispersed | |
Cec01g0414 | Cec-Chr1:4361771 | Cec04g1088 | Cec-Chr4:30392241 | 1.00E-79 | transposed | |
Cec01g0497 | Cec-Chr1:5064271 | Cec04g1088 | Cec-Chr4:30392241 | 6.70E-45 | transposed | |
Cec01g1559 | Cec-Chr1:30162758 | Cec04g1088 | Cec-Chr4:30392241 | 6.30E-81 | transposed | |
Cec08g1264 | Cec-Chr8:24605311 | Cec04g1088 | Cec-Chr4:30392241 | 5.50E-65 | transposed | |
Cec09g0187 | Cec-Chr9:1663622 | Cec04g1088 | Cec-Chr4:30392241 | 4.80E-77 | transposed | |
Cec09g2117 | Cec-Chr9:38161239 | Cec04g1088 | Cec-Chr4:30392241 | 2.80E-96 | transposed | |
Cec10g2002 | Cec-Chr10:34803829 | Cec04g1088 | Cec-Chr4:30392241 | 4.40E-102 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec04g1088 | K09873 | - | csv:101204225 | 465.692 |