Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1101 ATGGCTTCTACTCTCTGTTTTCCCTCAATCACTTTCCCCTCCTCTCCCTTCCACAAACGAATCCCTCTCAGACGAAGAACCCCATCTCCTTATCCCTCCATTAAATCCTCCATTGACGAAGGAGGAAATCCCTCAACGCCCGCAAAGCTTAAGAACTCCACAAGCACTGCAAAATCCGGCTCCTGGGTCAGCCCTGATTGGCTCACCTCTCTAACTCGTTACATTACTCTAGGGCCGGGCGACGACTCCGGCATCCCCATTGCAACTGCCAAGCTCGATGACGTTTCTGATCTTCTTGGCGGTGCTCTTTTCCTTCCACTTTTCAAGTGGATGAATGACTATGGACCCATTTACAGGCTCGCTGCTGGCCCTAGAAATTTCGTCGTCGTTAGTGATCCTGCCATTGCTAAGCACGTTCTCAGGAACTATGGGACTTACGCTAAAGGCCTTGTTTCTGAGGTTTCCGAGTTCTTGTTTGGGTCAGGTTTCGCCATTGCAGAAGGCCCTCTCTGGACGGTTCGCCGTAGGGCTGTGGTTCCATCTCTTCACAAGAAGTACTTATCGGTTATTGTTGATCGAGTATTTTGTAAATGTGCCACGAGATTGGTGGAGAAGCTGGAAAAGGATGCATTAAATAATAATTCGGTTAACATGGAGGAAAAGTTTTCTCAACTAACTCTTGATGTTATTGGTCTATCTGTATTCAACTACAGTTTTGATTCTCTCTCTACTGACAGCCCTGTGATTGATGCAGTTTACACTGCTTTGAAAGAGGCAGAGGCTCGTTCTACTGATATTTTACCATATTGGAAGATTAAGGCTCTGTGTAAGATAATCCCAAGACAGATAAAAGCTGAAGAAGCAGTTACGGTGATCAGGAGAACTGTTGAAGAACTCATTGCCAAGTGCAAAGAAATTGTTGAAAGTGAGGGTGAGCGTATTGATGAGGAGGAATATGTGAATGATGCTGATCCAAGCATCCTCCGATTTCTGCTGGCCAGTAGAGAAGAGGTCTCAAGTGTACAGTTACGAGACGACCTATTGTCCATGTTGGTTGCTGGGCATGAAACTACTGGTTCTGTTCTGACTTGGACACTGTATCTTTTAAGTAAGCATTCCTCCTCATTGGTCAAGGCACAAAATGAAGTTGATAGAGTGTTACAAGGAAGGCCTCCTTCTTATGAAGATACGAAGGAACTTAAATATTTGACACGTTGTATCCTTGAGTCAATGCGACTTTACCCACATCCACCTGTTTTGATAAGAAGAGCTCAAGTTGCTGACATACTCCCCGGAAATTACAAGGTTAACGCTGGTCAAGATATCATGATTTCAGTATATAACATCCATCGCTCTTCCCAGGTCTGGGAACAAGCAGAAGAGTTTATACCAGAAAGATTTGACTTGGAAGGCTCTGTACCTAATGAAAGCAATACAGATTTCAGATTTATTCCGTTCAGCGGTGGACCTCGAAAATGTGTCGGTGATCAATTTGCCTTGCTTGAAGCTATTGTTGCACTTGCCATATTTCTACAGCATATGAATTTCGAGCTGGTTCCAAATCAGACCATTGGGATGACTACTGGAGCAACTATACATACAACAAACGGTTTGTACATGAAACTCAGCCAAAGGAAGCTGACCCAAGAGTTAGTTTCTCCTGCATCTTCAAGGTCAGGTGTGAGGTGGGAGAATGAAAGGGCAACTAACATCCTTTGGCATAACTTTTTTTACCTAAACTTTCCTCTGAATCTCTCTATGCACTTTTCTGGTGGATCTTGGGATTCAAGAATCTTTGAACAGGGCAAGTCAGATTATGATGTTTGGAGTTTCTTGTATGACCACTTGAGTTCTACATCAATGTATGTCCAAGAAATCTATGTATGA 1887 43.67 MASTLCFPSITFPSSPFHKRIPLRRRTPSPYPSIKSSIDEGGNPSTPAKLKNSTSTAKSGSWVSPDWLTSLTRYITLGPGDDSGIPIATAKLDDVSDLLGGALFLPLFKWMNDYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTYAKGLVSEVSEFLFGSGFAIAEGPLWTVRRRAVVPSLHKKYLSVIVDRVFCKCATRLVEKLEKDALNNNSVNMEEKFSQLTLDVIGLSVFNYSFDSLSTDSPVIDAVYTALKEAEARSTDILPYWKIKALCKIIPRQIKAEEAVTVIRRTVEELIAKCKEIVESEGERIDEEEYVNDADPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKHSSSLVKAQNEVDRVLQGRPPSYEDTKELKYLTRCILESMRLYPHPPVLIRRAQVADILPGNYKVNAGQDIMISVYNIHRSSQVWEQAEEFIPERFDLEGSVPNESNTDFRFIPFSGGPRKCVGDQFALLEAIVALAIFLQHMNFELVPNQTIGMTTGATIHTTNGLYMKLSQRKLTQELVSPASSRSGVRWENERATNILWHNFFYLNFPLNLSMHFSGGSWDSRIFEQGKSDYDVWSFLYDHLSSTSMYVQEIYV 628
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 30563229 30570151 - CePI673135_04g011010.1 Cec04g1101 200583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1101 628 Pfam Cytochrome P450 107 528 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1101 628 PANTHER CYTOCHROME P450 FAMILY 4 102 543 IPR050196 GO:0009507(PANTHER)|GO:0009974(PANTHER)|GO:0016117(PANTHER)
Cec04g1101 628 CDD CYP97 105 539 - -
Cec04g1101 628 MobiDBLite consensus disorder prediction 23 60 - -
Cec04g1101 628 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 486 495 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cec04g1101 628 SUPERFAMILY Cytochrome P450 100 545 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1101 628 PRINTS P450 superfamily signature 353 370 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1101 628 PRINTS P450 superfamily signature 405 416 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1101 628 PRINTS P450 superfamily signature 493 504 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1101 628 PRINTS P450 superfamily signature 484 493 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1101 628 MobiDBLite consensus disorder prediction 30 60 - -
Cec04g1101 628 Gene3D Cytochrome P450 90 561 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1101 628 PRINTS E-class P450 group I signature 493 516 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1101 628 PRINTS E-class P450 group I signature 445 469 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1101 628 PRINTS E-class P450 group I signature 483 493 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1101 628 PRINTS E-class P450 group I signature 111 130 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1101 628 PRINTS E-class P450 group I signature 342 359 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1101 628 PRINTS E-class P450 group I signature 362 388 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1101 Cec-Chr4:30563229 Cec05g2585 Cec-Chr5:36751813 6.10E-36 dispersed
Cec07g1195 Cec-Chr7:27352480 Cec04g1101 Cec-Chr4:30563229 4.60E-108 transposed
Cec10g0779 Cec-Chr10:12577722 Cec04g1101 Cec-Chr4:30563229 3.60E-129 transposed
Cec03g0308 Cec-Chr3:3491305 Cec04g1101 Cec-Chr4:30563229 1.30E-22 wgd
Cec04g1101 Cec-Chr4:30563229 Cec08g1531 Cec-Chr8:27015429 2.30E-14 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1101 K09837 - csv:101204961 1033.48