Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1102 ATGCGCCTGTTCTTTTGCCTCATATCCGCCTTAGCCTCCGTCGTCGTCGTCGTCGTCGTCGTCACGGGCACGGCGGCTACCTCCCCCAACCATTTCCCTCTCTACAGAGCCTTCCCTCACTTTCCCTCTCCCCACTTCCACTCCCTCACAGCTCGCGACCGCCTCCGCCATTCCCGCGTCTTGCGACGACTCGCCGGTGGCATCGTCAATTTCTCCGTTAAAGGCTCCTCCGATCCTTTCATCGGGCTTTATTTCACCAAAGTGAAGTTGGGAAATCCTGAGAGGGAATTCAATGTGCAGATCGATACTGGGAGTGATATTTTGTGGGTCACTTGCAGTCCTTGCGATGGCTGTCCTCAATCAAGCGGACTTGGAGTTGAACTCAACTTATTTGATGCTACAAAGTCATCCTCTGCCAGGGTTGTTCCCTGCTCAGATCCAATATGTGCTGCAATTCCAACCACCACAGATCAATGCTTATCCCAGGCTGACCATTGCGGTTACACCTTCCATTATCGGGATAGAAGTGGGACGTCGGGCTTTTATGTTACTGATTTGATGCATTTTGACATACTTCTGGGGGAGTCAACGATTGCAAATTCTTCAGCCCCTATTGTGTTTGGGTGTAGCGTATATCAGTATGGGGATTTGACTCGGGCAACCAAAGCACTTGATGGAATTTTTGGGTTTGGTCAAGGGGAGTTCTCAGTTATTTCACAATTGTCTTCTCGAGGGATCACACCTAAAGTATTCTCCCATTGTTTAAAAGGAGGGGAAAATGGAGGGGGTATCTTGGTTCTTGGTGAGATTCTGGAGCCCAGCATTGTTTATAGTCCACTTATTCCATCTCAGCCGCACTATACCTTAAATTTACAGAGTATTGCACTCAGCGGTCAATTTTTTGCAAGCCCCCCCGTGTTTCCAATATCAAATGCAGGAGAAACTATCATTGACTCCGGAACAACTTTGGCTTACCTTGTGGAAGAAGTCTACGATTGGATTATCAGTGTGATAACTTCTGCTGTTTCTCAATCAGCCATTCCCACAATTTCGAGGGGTAACCAATGTTATCGAGTCTCTACGAGTATAGCAGAAATATTTCCTGTGGTCAGTTTTAATTTTGAGGGTACTGCATCCATGGTGGTGACACCTGAAGAATATCTTCAGTTTGACTCCATAGAACCAGCTTTATGGTGCATAGGTTTTCAGAAAGCTGAGGATGGAGTAAACATTTTAGGAGATCTTGTTTTGAAAGATAAGATCATTATCTACGACTTGGCTCGACAACGGATTGGATGGGCGAATTATGACTGTTCGTCATCTGTAAATGTTTCTGTAACATCCGGGAAGGATGTGTTCATCAATGAAGGACAGCTGAGTGTCAACAGCTCCTCAAGAAAGCATTTTTATCAGCTGCTCAACATTGTCATTGGTTCTCTTGTCTTCATTATTTGTGCTAGCTGCATTCGCCTGGCCAATCTGTATTTTGAATGCTTGGTTGGGTTGCTTATCGCCAATCTGCGAAGAGCAAATGTTCCTGTGCCTGCATCTTACATCTGGCTTAATGCAGGCTCCTTTTCTGTGAGGTCGTCGTGCAGCTGCAACCCATAA 1611 46.18 MRLFFCLISALASVVVVVVVVTGTAATSPNHFPLYRAFPHFPSPHFHSLTARDRLRHSRVLRRLAGGIVNFSVKGSSDPFIGLYFTKVKLGNPEREFNVQIDTGSDILWVTCSPCDGCPQSSGLGVELNLFDATKSSSARVVPCSDPICAAIPTTTDQCLSQADHCGYTFHYRDRSGTSGFYVTDLMHFDILLGESTIANSSAPIVFGCSVYQYGDLTRATKALDGIFGFGQGEFSVISQLSSRGITPKVFSHCLKGGENGGGILVLGEILEPSIVYSPLIPSQPHYTLNLQSIALSGQFFASPPVFPISNAGETIIDSGTTLAYLVEEVYDWIISVITSAVSQSAIPTISRGNQCYRVSTSIAEIFPVVSFNFEGTASMVVTPEEYLQFDSIEPALWCIGFQKAEDGVNILGDLVLKDKIIIYDLARQRIGWANYDCSSSVNVSVTSGKDVFINEGQLSVNSSSRKHFYQLLNIVIGSLVFIICASCIRLANLYFECLVGLLIANLRRANVPVPASYIWLNAGSFSVRSSCSCNP 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 30577808 30582768 + CePI673135_04g011020.1 Cec04g1102 200584
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1102 Cec-Chr4:30577808 Cec08g0462 Cec-Chr8:13601852 7.70E-80 dispersed
Cec10g1975 Cec-Chr10:34522892 Cec04g1102 Cec-Chr4:30577808 1.20E-165 wgd
Cec02g2285 Cec-Chr2:40162579 Cec04g1102 Cec-Chr4:30577808 6.40E-137 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1102 - - - 0.0