Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1111 ATGCAGCTTCCACTCAGTGGCTTCTTGCTCCCCTTCAGCCTCCTAGCTCTCATTTTTCCAGTGGCTACCAGTGATCCTCTTGTCCCTGCACTCTGCATCTTCGGGGACTCGGTCGTCGATGTCGGAAATAACAACAATCTTCTAACAGTTGTCAAGGCTAACTTTCCTCCTTATGGAAGAGACTTTGTTACTCATACACCAACAGGAAGGTTTTGCAATGGAAAGCTTGCCACTGATTTTACCGCTGAATTCCTTGGGTTTTCTTCATATCCTCCTGCATATTTGAGCCAAGATGCCACTGGAAACAAGCTTTTAACAGGAGCCAACTTTGCTTCTGCTGCTTCTGGCTTTTATGATGGCACAGCTCAGCTCTATCATGCAGTTTCATTAACCCAGCAGTTGAATTATTACAAGGAATATCAAAGCAAAGTTGTGAACATGGTGGGAACAGAGAAAGCCAATGCCATATTCTCTGGTGCAATTCACCTTCTTAGTGCAGGCAGCAGTGATTTCATTCAGAATTACTATGTTAATCCTCTTCTTTACAGAACATACTCACCACAGCAATTCTCTGACATTCTCATTACATCTTTCTCCAACTTCATTCAGAACCTATATGGAATGGGAGCAAGGAGAATAGGGGTGACAGGGTTACCTCCATTGGGTTGCTTGCCAGCAGCTATCACCCTCTTTGGTTCTGGTAGCAACCAATGCATCCAAAGGTTAAATCAAGATGCCATTGCATTCAACACTAAGCTGCAAAGCACATCTCAGAGTTTGCAGAACAGATTCTCTGATCTCAAGCTTGTTGCCTTTGATATTTATCAACCTCTCTTGAATATGGTCTCGAAGCCTGCAGAAAATGGGTTTTTTGAGTCAAGAAGGGCATGTTGTGGAACAGGAACAGTAGAGACTTCCTTCCTTTGCAACAGTAGATCAATTGGAACATGCTCAAATGCCACGGGCTATGTTTTCTGGGACGGTTTCCATCCAACCGAAGCCGCAAATCAAGTGTTGGCGGGGGATTTACTTACTCAGGGATTCAGCCTCATTTGA 1056 44.13 MQLPLSGFLLPFSLLALIFPVATSDPLVPALCIFGDSVVDVGNNNNLLTVVKANFPPYGRDFVTHTPTGRFCNGKLATDFTAEFLGFSSYPPAYLSQDATGNKLLTGANFASAASGFYDGTAQLYHAVSLTQQLNYYKEYQSKVVNMVGTEKANAIFSGAIHLLSAGSSDFIQNYYVNPLLYRTYSPQQFSDILITSFSNFIQNLYGMGARRIGVTGLPPLGCLPAAITLFGSGSNQCIQRLNQDAIAFNTKLQSTSQSLQNRFSDLKLVAFDIYQPLLNMVSKPAENGFFESRRACCGTGTVETSFLCNSRSIGTCSNATGYVFWDGFHPTEAANQVLAGDLLTQGFSLI 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 30676983 30679104 + CePI673135_04g011110.1 Cec04g1111 200593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1111 351 Gene3D SGNH hydrolase 21 347 IPR036514 -
Cec04g1111 351 PANTHER GDSL ESTERASE/LIPASE EXL3 23 341 IPR050592 -
Cec04g1111 351 FunFam GDSL esterase/lipase APG 21 347 - -
Cec04g1111 351 Pfam GDSL-like Lipase/Acylhydrolase 33 340 IPR001087 GO:0016788(InterPro)
Cec04g1111 351 CDD SGNH_plant_lipase_like 29 345 IPR035669 -
Cec04g1111 351 SUPERFAMILY SGNH hydrolase 154 342 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1111 Cec-Chr4:30676983 Cec07g1460 Cec-Chr7:30218340 6.10E-118 dispersed
Cec02g2288 Cec-Chr2:40193343 Cec04g1111 Cec-Chr4:30676983 1.90E-135 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1111 - - - 0.0