Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1117 ATGGACACTAAGAACCAAGAAGAACATCACACCGACACCAGCGATTACACGTCGGAGGACGAGGGAAGTGAAGATTACCGCCGTGGAGGCTACCACGCTGTTCGAATTGGCGACACTTTCAAGAATGGTAGATATGTGGTGCAGAGCAAGCTCGGTTGGGGCCATTTCTCCACCGTCTGGCTCGCCTGGGACACCCAATCCCCCCGATATGTAGCTCTCAAAGTACAGAAGAGTGCTCAGCACTACACTGAGGCAGCCATGGATGAGATTACAATCTTGAAACAGATTGCAGAGGGAGACCCTGATGATAAAAAATGTGTGGTGAAGCTTTTGGATCATTTCAAGCATTCAGGACCTAATGGGCAACATGTTTGTATGATTTTTGAGTATTTGGGGGATAATCTGTTGACACTAATCAAGTACACTGACTACCGTGGATTACCAATTCATATGGTTAAGGAGATATGTTTTCATATATTGGTTGGCTTGGATTACTTGCATAAACAGCTTTCTATTATACATACTGATTTGAAGCCTGAAAATATTTTGTTACTCTCAATGATTGACCCATCAAAGGATCCTAGAAAATCTGGTATCCCTCTCATTCTTCCAACTAACAAGGACAAGGCTACATTTGAGTCTGGGATTTCAAAAGACATAAAATCTTCAAATGGAGATTTTGCTAAACACCATAAGAGAAACATTCGAAGAAAAGCAAAGCAAGCTGCTCAGGGGTATGTGGAGAAGGAAATGACTGCGGAGGCTGAGGCTAATCCAGAAACATCTTATACTATTGAATCATCTCCAAATGCAAAGTCGAGCACAGGGGCAACTGAGGAAAGGCAATCTAGTTTTCTCAATACAAACAGATCGTCTGATGCTGATGGAGGAAAGGGCGGCGGGGAAGAAAATCAAGTTGCCAAGAAAGGGAGTCGATTGAGAAAGAAGATGTTATTGGCTTCGGTGGATCTGAATTGCAAGTTGGTTGACTTTGGAAATGCATGTTGGACATACAAACAATTTACAAATGACATTCAGACTAGACAGTATAGGTGCCCAGAAGTTATCCTTGGATCAAAATACTCTACATCAGCAGATCTTTGGTCCTTTGCATGTATTTGTTTTGAGCTTGCAACTGGTGATGTGCTCTTTGATCCGCACAGTGGTGACAACTTCGACAGAGATGAGGACCACTTAGCTTTGATGATGGAACTTCTTGGAATGATGCCACGCAAGATTGCTTTCGGTGGTTGCTATTCTCGAGATTTCTTCAATCGATATGGAAATTTGAGGCACATCCGAAGGTTACGTTTCTGGCCACTAAACAAAGTTCTCATGGAGAAGTATGATTTCAACGAACAAGATGCAAATCAAATGGCAGAATTTCTAGTACCAATTCTTGATTTTGTTCCTGAGAACCGGCCCTCTGCAGGCCAATGCCTTCTCCATCCATGGATGAATGCTGGGCCTCGACTGTTGGAACCATCCCTGAATCTCGCGACTTCTGAGGAGAAGAAGATGGAGAAGGAAGATATGGAAGAAATGGAGGTTGGAATGAGAACAATTGCCATTAGTTCAGATTCTGAACAAGCTAATGATTCCCAGGAGTCCAAGTCCAAAACCAGCAAAACCAATTCCTGA 1641 43.02 MDTKNQEEHHTDTSDYTSEDEGSEDYRRGGYHAVRIGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQSPRYVALKVQKSAQHYTEAAMDEITILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMIFEYLGDNLLTLIKYTDYRGLPIHMVKEICFHILVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRKSGIPLILPTNKDKATFESGISKDIKSSNGDFAKHHKRNIRRKAKQAAQGYVEKEMTAEAEANPETSYTIESSPNAKSSTGATEERQSSFLNTNRSSDADGGKGGGEENQVAKKGSRLRKKMLLASVDLNCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIAFGGCYSRDFFNRYGNLRHIRRLRFWPLNKVLMEKYDFNEQDANQMAEFLVPILDFVPENRPSAGQCLLHPWMNAGPRLLEPSLNLATSEEKKMEKEDMEEMEVGMRTIAISSDSEQANDSQESKSKTSKTNS 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 30711911 30714434 - CePI673135_04g011170.1 Cec04g1117 200599
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1117 Cec-Chr4:30711911 Cec08g1277 Cec-Chr8:24777015 4.20E-33 dispersed
Cec02g2286 Cec-Chr2:40182638 Cec04g1117 Cec-Chr4:30711911 2.60E-213 transposed
Cec04g1801 Cec-Chr4:36801911 Cec04g1117 Cec-Chr4:30711911 2.50E-132 transposed
Cec03g0313 Cec-Chr3:3568228 Cec04g1117 Cec-Chr4:30711911 3.30E-33 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71911 PF00069 Pkinase 1.00E-18 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1117 K08832 - csv:101206384 1035.79