Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1135 ATGGATGGAGCACATGACATAGTAAGCTGCCAAAGTGGGGTCTCATCTCTCCTAAATAATCAGAGGCAGTATCAGAATTCTGAAGAGAAAGATACTATTTTTACTCCCTTTCTCTCTCTAAGCCTCCCTTCTTCTTCTCTCCGCCCACCGCTCCGGACCCCAAAACTAGGTTTTACCTTTTATCTCTTTTCCATTCTTCCCAATCCATTGCATTTCCGCCCTTACAACTCACTCCATCTCAGGTTATGGCAAGTGGAAGGTCGGATGTTCAATGTAGTAATGGGATCTGGTACTTGTGAAATAGTTGAAGCAAGGGAAGAAATAAAACCTGTTCAAAGTAAGGCAGGATCTCGTCATTCAGATTTTGTATCAGACAAAGATCGAAGACTTTCTGCATTGAAAATTGGATTCAAGGGATCTCTAGAGGATGATATCAATCAGCTTTTTGAGTCAATTAGTATTAAAAATGCATCCAAGAGTTTAGGTCATTCGCAAGTCGAGGTAAATGCACTGAGAAAAAGTACACTTAAGAAGACAATAACTGTTGGCATACCTCGGTCACCAGGTATTGGTACTTCTGATTCTGGTAGTCTGAAGCAAGCACTTAGGGAACTATGCCTTTCAAAGGCGTCTGAAATGGCTGCTATGAAGAGATCATCAAAATCATCCAGCTCTTCAAGAATCTCAGAAGCTGGGCGGATCAAGACATTGTATAATTCAGTTATGGTTGAAGCCACTGAGTCAGGCTCTTCTTCAGATAAGGGGGAACGCGTGGTTGAAATTTCCCTGGTTCCAGAGGAAAAGAAATTGAACTTTGAGAAGAGACTTGAGCATGTCCAGGCATCTGCTGTTAAATCACTGGTTGAAAGTGCTCATTCTTCTCAGTTGCCCGCTGCGAAAACGAAAAAAGATGTTGAGGTTGTTACTGTGGAACAAAACGTCAATCCCACTTTGTCAAGGAAAGTTGGATCTCAAACATTAAAGGCAGAGCTGGAGAAGGAAGAAGAGTCCATTACTCCACCATCTATATCTTCTTGCACTATTGGCAAGGTCTTAGAGAAGGAGAAGAAAATTCTTGCCGGAAGCAGGGTAGCAAATAAAGTGGCATCATCTAAGGCAGGACGGAAAGGTAGGTTGCAAACTGCATCTTCATCTAAGTTGGGTAGTGGCAATAAGGTAACCAAGTTATCTAGAAGTGCCTCCCGTTCTGTTAAACCAGTTATTAGAAACAAGGGGCTGGCTAAGAAGAAAGTCAAACAGGATTTGAGTTCTCCAACATGTAGTTCAAGCACATACAATGCAGTCAATGGTGATGCGGATCCTAGTAAAAGGAAGTTGATATGTGAGAGGTGCCACTGTGCAATGAATAGTGCAGCTAAAGACTCAAAGAAGGGCGCTGCATCCCAGTTTAGTGGTCTTTGTCCTGATGTAAACATGACCAATTCAAAACCTGGTGTTAACAAATCAGGCTTCAATGTGGATGGCAAGGCTTCTGATGTTAAAGTAAAAAGAAATACAAGGGTGCGGGATAAGGGTGAATTTTCTCAAAGCTCAAAAAGTAGTCAAGGTGAGTACAGTAGCAGTACGACGAGTATTATAAGTGACGATAGCAATGGGCACGGACCCAGTAATGGTAACAGACCTCATATGTCAAAAGATGTTAGGTGGGAAGCCATACGCCATGCACAATTGCAGTATGGGGTCCTCAGCTTGCGGCATTTTAATCTTTTAAAGAAGCTTGGTTGTGGGGACATTGGAACAGTGTATCTTGCTGAGCTAACCGGCACTAATTGCCTATTTGCCATTAAGGTCATGGATAATGAGTTTCTAGCAAGACGGAAGAAAATGCCTAGAGCGCAAACTGAGAGAGAAATACTGAGAATGCTAGATCATCCATTCCTCCCTACACTTTATGTTCAATTTACTTCAGATAATCTATCATGTCTCGTCATGGAGTATTGTCCTGGAGGAGATCTTCATGTTCTGCGGCAGAAGCAGCTAGGCAGAGTTTTTCCTGAACCCGCAGCAAGATTTTATGTTGCTGAGGTCCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAGTTATTTATCGAGATTTAAAACCTGAGAACATTCTTGTCAGGGAAGATGGTCACATAATGCTTACCGACTTTGACCTGTCGCTTAGGTGCACGGTCAATCCAACACTCTTGAAGTCATCATCCTTCAATGCGGACTTGGTGAAAACATCAGGTCCCTGTACAGATTCTAGTTGTGCTGAGCCATTTTGCATTGAACCATCATGTCAAGTCCCATGCTTCAGCCCCAGGTTTCTACCTGCTGCTGCCAAAACAAGGAAGTCAAAACTTGACCTCACAACACAGTTCAGGTCATTGCCCCAGCTCGTTGCTGAACCCACTGATGCACGTTCGAATTCCTTCGTTGGCACTCATGAGTATTTGGCTCCCGAGATCATTAAAGGAGAGGGACATGGAGCGGCAGTTGATTGGTGGACGTTTGGTGTTTTTCTCTATGAGCTTCTGTATGGTAAAACCCCTTTCAAGGGTTCCAATAATGAAGAAACATTAGCCAATGTAATAATGCAGGGCCTCAGTTTTCCCGACAGCCCAATTGTTAGTTTCCAAGCGAGGGATCTTATCCGAGGACTGTTGGTAAAAGAACCCGAACACCGATTCGGGACAGAGAAAGGGGCTGCAGAGATCAAACAGCACCCGTTCTTCGAGGGGCTAAACTGGGCATTGATCCGGTGTGCAGTTCCTCCAGAACTTCCAGACTTATGTGATATGGACATTACAAGTATGATTGCTCAACAAAACAAGTTCAGGAATTTTGGCTTTGATACCTTCAACTTTCATGAAGGGTATCAAGGTTTCTGGGTTTTTCACCTTTTGGGGATTGTGTACGATAATGTGGATGAACGATATAGAAGTAGTAGAGAAAACGAAAAAATAAAAATGCCCAAGATTAAGACGAACCGTGTCAAGTATCCGGAGGGATGGGAGCTAATTGAACCAACTCTCCGAGAATTGCAAGCTAAGATGAGAGAAGCCGAGAATGACCCACATGATGGTAAGAGAAAATGTGAGACTTTGTGGCCTATATTCAAAATAGCCCATCAGAAAAGCCGCTATATATTTGACCTTTATCATCGAAGGAAGGAAATATCTAAGGAATTATTTGAATTCTGTTTGGATCAAGGCTATGCAGATCGTAACTTAATTGCAAAATGGAAGAAGCCTGGTTATGAACGTTTGTGCTGTCTAAGATGCATGCAACCCCGAGATCACAACTTTGCAACAACATGTGTGTGCCGGGTTCCCAAGCACCTGAGGGAGGAGAAGGTTATCGAGTGTGTGCATTGTGGTTGCAGGGGCTGCGCTAGTGGAGATTGA 3393 43.3 MDGAHDIVSCQSGVSSLLNNQRQYQNSEEKDTIFTPFLSLSLPSSSLRPPLRTPKLGFTFYLFSILPNPLHFRPYNSLHLRLWQVEGRMFNVVMGSGTCEIVEAREEIKPVQSKAGSRHSDFVSDKDRRLSALKIGFKGSLEDDINQLFESISIKNASKSLGHSQVEVNALRKSTLKKTITVGIPRSPGIGTSDSGSLKQALRELCLSKASEMAAMKRSSKSSSSSRISEAGRIKTLYNSVMVEATESGSSSDKGERVVEISLVPEEKKLNFEKRLEHVQASAVKSLVESAHSSQLPAAKTKKDVEVVTVEQNVNPTLSRKVGSQTLKAELEKEEESITPPSISSCTIGKVLEKEKKILAGSRVANKVASSKAGRKGRLQTASSSKLGSGNKVTKLSRSASRSVKPVIRNKGLAKKKVKQDLSSPTCSSSTYNAVNGDADPSKRKLICERCHCAMNSAAKDSKKGAASQFSGLCPDVNMTNSKPGVNKSGFNVDGKASDVKVKRNTRVRDKGEFSQSSKSSQGEYSSSTTSIISDDSNGHGPSNGNRPHMSKDVRWEAIRHAQLQYGVLSLRHFNLLKKLGCGDIGTVYLAELTGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRVFPEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCTVNPTLLKSSSFNADLVKTSGPCTDSSCAEPFCIEPSCQVPCFSPRFLPAAAKTRKSKLDLTTQFRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGKTPFKGSNNEETLANVIMQGLSFPDSPIVSFQARDLIRGLLVKEPEHRFGTEKGAAEIKQHPFFEGLNWALIRCAVPPELPDLCDMDITSMIAQQNKFRNFGFDTFNFHEGYQGFWVFHLLGIVYDNVDERYRSSRENEKIKMPKIKTNRVKYPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYIFDLYHRRKEISKELFEFCLDQGYADRNLIAKWKKPGYERLCCLRCMQPRDHNFATTCVCRVPKHLREEKVIECVHCGCRGCASGD 1130
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 30966628 30976606 - CePI673135_04g011350.1 Cec04g1135 200617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1135 1130 MobiDBLite consensus disorder prediction 376 404 - -
Cec04g1135 1130 MobiDBLite consensus disorder prediction 364 429 - -
Cec04g1135 1130 FunFam Serine/threonine-protein kinase D6PK-like 572 657 - -
Cec04g1135 1130 PRINTS G10 protein signature 997 1017 IPR001748 GO:0005634(InterPro)
Cec04g1135 1130 PRINTS G10 protein signature 1082 1107 IPR001748 GO:0005634(InterPro)
Cec04g1135 1130 PRINTS G10 protein signature 1032 1055 IPR001748 GO:0005634(InterPro)
Cec04g1135 1130 PRINTS G10 protein signature 1056 1081 IPR001748 GO:0005634(InterPro)
Cec04g1135 1130 PRINTS G10 protein signature 1118 1127 IPR001748 GO:0005634(InterPro)
Cec04g1135 1130 MobiDBLite consensus disorder prediction 481 550 - -
Cec04g1135 1130 CDD STKc_phototropin_like 572 928 - -
Cec04g1135 1130 FunFam serine/threonine-protein kinase D6PK-like 802 925 - -
Cec04g1135 1130 ProSiteProfiles Protein kinase domain profile. 574 907 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1135 1130 Gene3D Phosphorylase Kinase; domain 1 572 653 - -
Cec04g1135 1130 PANTHER FLIPPASE KINASE 1-RELATED 392 933 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cec04g1135 1130 Pfam Protein kinase domain 804 907 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1135 1130 Pfam Protein kinase domain 575 725 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1135 1130 Gene3D Transferase(Phosphotransferase) domain 1 654 723 - -
Cec04g1135 1130 Gene3D Transferase(Phosphotransferase) domain 1 800 925 - -
Cec04g1135 1130 ProSitePatterns G10 protein signature 1. 1085 1107 IPR018230 GO:0005634(InterPro)
Cec04g1135 1130 SMART serkin_6 574 907 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1135 1130 MobiDBLite consensus disorder prediction 515 545 - -
Cec04g1135 1130 ProSitePatterns Serine/Threonine protein kinases active-site signature. 695 707 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1135 1130 Pfam Pre-mRNA-splicing factor BUD31 986 1128 IPR001748 GO:0005634(InterPro)
Cec04g1135 1130 FunFam serine/threonine-protein kinase D6PK-like 658 725 - -
Cec04g1135 1130 ProSitePatterns G10 protein signature 2. 1118 1127 IPR018230 GO:0005634(InterPro)
Cec04g1135 1130 MobiDBLite consensus disorder prediction 497 514 - -
Cec04g1135 1130 SUPERFAMILY Protein kinase-like (PK-like) 549 924 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1135 Cec-Chr4:30966628 Cec04g1828 Cec-Chr4:37009330 3.30E-149 dispersed
Cec01g1332 Cec-Chr1:26087414 Cec04g1135 Cec-Chr4:30966628 8.00E-44 transposed
Cec02g2311 Cec-Chr2:40428850 Cec04g1135 Cec-Chr4:30966628 1.80E-195 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71913 PF00069 Pkinase 8.80E-36 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1135 - - - 0.0