Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec04g1135 | ATGGATGGAGCACATGACATAGTAAGCTGCCAAAGTGGGGTCTCATCTCTCCTAAATAATCAGAGGCAGTATCAGAATTCTGAAGAGAAAGATACTATTTTTACTCCCTTTCTCTCTCTAAGCCTCCCTTCTTCTTCTCTCCGCCCACCGCTCCGGACCCCAAAACTAGGTTTTACCTTTTATCTCTTTTCCATTCTTCCCAATCCATTGCATTTCCGCCCTTACAACTCACTCCATCTCAGGTTATGGCAAGTGGAAGGTCGGATGTTCAATGTAGTAATGGGATCTGGTACTTGTGAAATAGTTGAAGCAAGGGAAGAAATAAAACCTGTTCAAAGTAAGGCAGGATCTCGTCATTCAGATTTTGTATCAGACAAAGATCGAAGACTTTCTGCATTGAAAATTGGATTCAAGGGATCTCTAGAGGATGATATCAATCAGCTTTTTGAGTCAATTAGTATTAAAAATGCATCCAAGAGTTTAGGTCATTCGCAAGTCGAGGTAAATGCACTGAGAAAAAGTACACTTAAGAAGACAATAACTGTTGGCATACCTCGGTCACCAGGTATTGGTACTTCTGATTCTGGTAGTCTGAAGCAAGCACTTAGGGAACTATGCCTTTCAAAGGCGTCTGAAATGGCTGCTATGAAGAGATCATCAAAATCATCCAGCTCTTCAAGAATCTCAGAAGCTGGGCGGATCAAGACATTGTATAATTCAGTTATGGTTGAAGCCACTGAGTCAGGCTCTTCTTCAGATAAGGGGGAACGCGTGGTTGAAATTTCCCTGGTTCCAGAGGAAAAGAAATTGAACTTTGAGAAGAGACTTGAGCATGTCCAGGCATCTGCTGTTAAATCACTGGTTGAAAGTGCTCATTCTTCTCAGTTGCCCGCTGCGAAAACGAAAAAAGATGTTGAGGTTGTTACTGTGGAACAAAACGTCAATCCCACTTTGTCAAGGAAAGTTGGATCTCAAACATTAAAGGCAGAGCTGGAGAAGGAAGAAGAGTCCATTACTCCACCATCTATATCTTCTTGCACTATTGGCAAGGTCTTAGAGAAGGAGAAGAAAATTCTTGCCGGAAGCAGGGTAGCAAATAAAGTGGCATCATCTAAGGCAGGACGGAAAGGTAGGTTGCAAACTGCATCTTCATCTAAGTTGGGTAGTGGCAATAAGGTAACCAAGTTATCTAGAAGTGCCTCCCGTTCTGTTAAACCAGTTATTAGAAACAAGGGGCTGGCTAAGAAGAAAGTCAAACAGGATTTGAGTTCTCCAACATGTAGTTCAAGCACATACAATGCAGTCAATGGTGATGCGGATCCTAGTAAAAGGAAGTTGATATGTGAGAGGTGCCACTGTGCAATGAATAGTGCAGCTAAAGACTCAAAGAAGGGCGCTGCATCCCAGTTTAGTGGTCTTTGTCCTGATGTAAACATGACCAATTCAAAACCTGGTGTTAACAAATCAGGCTTCAATGTGGATGGCAAGGCTTCTGATGTTAAAGTAAAAAGAAATACAAGGGTGCGGGATAAGGGTGAATTTTCTCAAAGCTCAAAAAGTAGTCAAGGTGAGTACAGTAGCAGTACGACGAGTATTATAAGTGACGATAGCAATGGGCACGGACCCAGTAATGGTAACAGACCTCATATGTCAAAAGATGTTAGGTGGGAAGCCATACGCCATGCACAATTGCAGTATGGGGTCCTCAGCTTGCGGCATTTTAATCTTTTAAAGAAGCTTGGTTGTGGGGACATTGGAACAGTGTATCTTGCTGAGCTAACCGGCACTAATTGCCTATTTGCCATTAAGGTCATGGATAATGAGTTTCTAGCAAGACGGAAGAAAATGCCTAGAGCGCAAACTGAGAGAGAAATACTGAGAATGCTAGATCATCCATTCCTCCCTACACTTTATGTTCAATTTACTTCAGATAATCTATCATGTCTCGTCATGGAGTATTGTCCTGGAGGAGATCTTCATGTTCTGCGGCAGAAGCAGCTAGGCAGAGTTTTTCCTGAACCCGCAGCAAGATTTTATGTTGCTGAGGTCCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAGTTATTTATCGAGATTTAAAACCTGAGAACATTCTTGTCAGGGAAGATGGTCACATAATGCTTACCGACTTTGACCTGTCGCTTAGGTGCACGGTCAATCCAACACTCTTGAAGTCATCATCCTTCAATGCGGACTTGGTGAAAACATCAGGTCCCTGTACAGATTCTAGTTGTGCTGAGCCATTTTGCATTGAACCATCATGTCAAGTCCCATGCTTCAGCCCCAGGTTTCTACCTGCTGCTGCCAAAACAAGGAAGTCAAAACTTGACCTCACAACACAGTTCAGGTCATTGCCCCAGCTCGTTGCTGAACCCACTGATGCACGTTCGAATTCCTTCGTTGGCACTCATGAGTATTTGGCTCCCGAGATCATTAAAGGAGAGGGACATGGAGCGGCAGTTGATTGGTGGACGTTTGGTGTTTTTCTCTATGAGCTTCTGTATGGTAAAACCCCTTTCAAGGGTTCCAATAATGAAGAAACATTAGCCAATGTAATAATGCAGGGCCTCAGTTTTCCCGACAGCCCAATTGTTAGTTTCCAAGCGAGGGATCTTATCCGAGGACTGTTGGTAAAAGAACCCGAACACCGATTCGGGACAGAGAAAGGGGCTGCAGAGATCAAACAGCACCCGTTCTTCGAGGGGCTAAACTGGGCATTGATCCGGTGTGCAGTTCCTCCAGAACTTCCAGACTTATGTGATATGGACATTACAAGTATGATTGCTCAACAAAACAAGTTCAGGAATTTTGGCTTTGATACCTTCAACTTTCATGAAGGGTATCAAGGTTTCTGGGTTTTTCACCTTTTGGGGATTGTGTACGATAATGTGGATGAACGATATAGAAGTAGTAGAGAAAACGAAAAAATAAAAATGCCCAAGATTAAGACGAACCGTGTCAAGTATCCGGAGGGATGGGAGCTAATTGAACCAACTCTCCGAGAATTGCAAGCTAAGATGAGAGAAGCCGAGAATGACCCACATGATGGTAAGAGAAAATGTGAGACTTTGTGGCCTATATTCAAAATAGCCCATCAGAAAAGCCGCTATATATTTGACCTTTATCATCGAAGGAAGGAAATATCTAAGGAATTATTTGAATTCTGTTTGGATCAAGGCTATGCAGATCGTAACTTAATTGCAAAATGGAAGAAGCCTGGTTATGAACGTTTGTGCTGTCTAAGATGCATGCAACCCCGAGATCACAACTTTGCAACAACATGTGTGTGCCGGGTTCCCAAGCACCTGAGGGAGGAGAAGGTTATCGAGTGTGTGCATTGTGGTTGCAGGGGCTGCGCTAGTGGAGATTGA | 3393 | 43.3 | MDGAHDIVSCQSGVSSLLNNQRQYQNSEEKDTIFTPFLSLSLPSSSLRPPLRTPKLGFTFYLFSILPNPLHFRPYNSLHLRLWQVEGRMFNVVMGSGTCEIVEAREEIKPVQSKAGSRHSDFVSDKDRRLSALKIGFKGSLEDDINQLFESISIKNASKSLGHSQVEVNALRKSTLKKTITVGIPRSPGIGTSDSGSLKQALRELCLSKASEMAAMKRSSKSSSSSRISEAGRIKTLYNSVMVEATESGSSSDKGERVVEISLVPEEKKLNFEKRLEHVQASAVKSLVESAHSSQLPAAKTKKDVEVVTVEQNVNPTLSRKVGSQTLKAELEKEEESITPPSISSCTIGKVLEKEKKILAGSRVANKVASSKAGRKGRLQTASSSKLGSGNKVTKLSRSASRSVKPVIRNKGLAKKKVKQDLSSPTCSSSTYNAVNGDADPSKRKLICERCHCAMNSAAKDSKKGAASQFSGLCPDVNMTNSKPGVNKSGFNVDGKASDVKVKRNTRVRDKGEFSQSSKSSQGEYSSSTTSIISDDSNGHGPSNGNRPHMSKDVRWEAIRHAQLQYGVLSLRHFNLLKKLGCGDIGTVYLAELTGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRVFPEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCTVNPTLLKSSSFNADLVKTSGPCTDSSCAEPFCIEPSCQVPCFSPRFLPAAAKTRKSKLDLTTQFRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGKTPFKGSNNEETLANVIMQGLSFPDSPIVSFQARDLIRGLLVKEPEHRFGTEKGAAEIKQHPFFEGLNWALIRCAVPPELPDLCDMDITSMIAQQNKFRNFGFDTFNFHEGYQGFWVFHLLGIVYDNVDERYRSSRENEKIKMPKIKTNRVKYPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYIFDLYHRRKEISKELFEFCLDQGYADRNLIAKWKKPGYERLCCLRCMQPRDHNFATTCVCRVPKHLREEKVIECVHCGCRGCASGD | 1130 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 30966628 | 30976606 | - | CePI673135_04g011350.1 | Cec04g1135 | 200617 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec04g1135 | 1130 | MobiDBLite | consensus disorder prediction | 376 | 404 | - | - | |
Cec04g1135 | 1130 | MobiDBLite | consensus disorder prediction | 364 | 429 | - | - | |
Cec04g1135 | 1130 | FunFam | Serine/threonine-protein kinase D6PK-like | 572 | 657 | - | - | |
Cec04g1135 | 1130 | PRINTS | G10 protein signature | 997 | 1017 | IPR001748 | GO:0005634(InterPro) | |
Cec04g1135 | 1130 | PRINTS | G10 protein signature | 1082 | 1107 | IPR001748 | GO:0005634(InterPro) | |
Cec04g1135 | 1130 | PRINTS | G10 protein signature | 1032 | 1055 | IPR001748 | GO:0005634(InterPro) | |
Cec04g1135 | 1130 | PRINTS | G10 protein signature | 1056 | 1081 | IPR001748 | GO:0005634(InterPro) | |
Cec04g1135 | 1130 | PRINTS | G10 protein signature | 1118 | 1127 | IPR001748 | GO:0005634(InterPro) | |
Cec04g1135 | 1130 | MobiDBLite | consensus disorder prediction | 481 | 550 | - | - | |
Cec04g1135 | 1130 | CDD | STKc_phototropin_like | 572 | 928 | - | - | |
Cec04g1135 | 1130 | FunFam | serine/threonine-protein kinase D6PK-like | 802 | 925 | - | - | |
Cec04g1135 | 1130 | ProSiteProfiles | Protein kinase domain profile. | 574 | 907 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec04g1135 | 1130 | Gene3D | Phosphorylase Kinase; domain 1 | 572 | 653 | - | - | |
Cec04g1135 | 1130 | PANTHER | FLIPPASE KINASE 1-RELATED | 392 | 933 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Cec04g1135 | 1130 | Pfam | Protein kinase domain | 804 | 907 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec04g1135 | 1130 | Pfam | Protein kinase domain | 575 | 725 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec04g1135 | 1130 | Gene3D | Transferase(Phosphotransferase) domain 1 | 654 | 723 | - | - | |
Cec04g1135 | 1130 | Gene3D | Transferase(Phosphotransferase) domain 1 | 800 | 925 | - | - | |
Cec04g1135 | 1130 | ProSitePatterns | G10 protein signature 1. | 1085 | 1107 | IPR018230 | GO:0005634(InterPro) | |
Cec04g1135 | 1130 | SMART | serkin_6 | 574 | 907 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec04g1135 | 1130 | MobiDBLite | consensus disorder prediction | 515 | 545 | - | - | |
Cec04g1135 | 1130 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 695 | 707 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec04g1135 | 1130 | Pfam | Pre-mRNA-splicing factor BUD31 | 986 | 1128 | IPR001748 | GO:0005634(InterPro) | |
Cec04g1135 | 1130 | FunFam | serine/threonine-protein kinase D6PK-like | 658 | 725 | - | - | |
Cec04g1135 | 1130 | ProSitePatterns | G10 protein signature 2. | 1118 | 1127 | IPR018230 | GO:0005634(InterPro) | |
Cec04g1135 | 1130 | MobiDBLite | consensus disorder prediction | 497 | 514 | - | - | |
Cec04g1135 | 1130 | SUPERFAMILY | Protein kinase-like (PK-like) | 549 | 924 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g1135 | Cec-Chr4:30966628 | Cec04g1828 | Cec-Chr4:37009330 | 3.30E-149 | dispersed | |
Cec01g1332 | Cec-Chr1:26087414 | Cec04g1135 | Cec-Chr4:30966628 | 8.00E-44 | transposed | |
Cec02g2311 | Cec-Chr2:40428850 | Cec04g1135 | Cec-Chr4:30966628 | 1.80E-195 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71913 | PF00069 | Pkinase | 8.80E-36 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec04g1135 | - | - | - | 0.0 |