Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1140 ATGGGAGACTTGCCCGGCGGATCTCCGTCGTCCACGGTGGCGGATGACCACCACAACCTGCTTTTGGACGCCCTTGGAGATGAAAAGATAGCGAGAGAGTCCAAAATCTACAGCTATGGAAAGAGCTTCAATGGGTTCGCCGCAAGACTTTTGCCTCACGAAGCCACCAAGCTCTCAAATGAGGAGGGTGTGGTTTCAGTATTTCGGAGCAGAAAGCAAAGAGTTGTGACGACAAGATCCTGGGACTTTTTGGGATTAAATCATCATTATTCCAAACGTAACCCTAAAATTGAGTCTAATCTCATTGTCGCCGTTTTGGATACGGGGATTTGGATGGACAGTCCTAGTTTCAACGATGAAGGCTATGGCCCACCACCCTCTAAATGGAAGGGCAAATGCGTCACTGGTCCCAACTTCACAGCCTGCAACAACAAAGTAATCGGTGCGAATTACTTCGATCTGGAAAACGTAAGCCAATATCCAGAGTCGAGCGTGGCGGACACGGAGGGCCACGGCTCTCACACTGCGTCCACGGTGGCAGGTTCGGCCGTGGAGGGGGCGAGCTTGTACGGCCTGGCCAAAGGGACGGCGCGCGGCGGCGTGCCTTCAGCTCGAATTGCAGTCTACAAAGTGTGTTGGAGCATTTTCTGCAGCGAAATGGACGTTCTTGCTGGCTTCGATGAGGCAATCGCCGATGGCGTCGATTTGATTTCCGTCTCCATAGGGTCGCCGCCGATGGATTTCTTCAGGGACGGCCAAGCAATTGGGGCTTTTCATGCCATGAAGAAGGGAATTTTGACGTCCTGCGCCGCCGGCAACGACGGCCCTGAATTGTCCACCGTCGAGAATGTGGCGCCCTGGATTATGACCGTCGCTGCTACGGCCATTGATAGACGGTTCGTCACCGCTTTCAAACTCGGTAATGGCAACAAATTTACTGGACGTTCCATCAACACCTTCTCGCCAGAGAAAGAAATGTACTCTCTTACAAGCGGAGCCAAAGCGTCCAACAATGGCACACCCTATCAAGGAAATGCAAGTGCTTGTGATCCAGAAGCTATAAGCCAAAGCAAAGTGAAGGGAAAGATTGTGTATTGCTTGAAAACTTACACAGACCCCTACATCAAATCCTTAGGAGGCACTGGAGTCATTCAACTCACTCGACAACAAGCTGATTATTCCTCCATTTTGCTTCTTCCTGGGGTTACCATCCCCTCACTCTCTGGCAAATACATCGATCTTTATATCAACTCCACCAAGAATCCTAAAGCTGTCATTTATAAGAGTAAAACTGTCAGAATTGATGCTCCCTTTGTTGCTTCTTTCTCATCTAGAGGGCCTCAGTTTATCAGTAGTAACATTCTCAAGCCTGATCTTTCTGCACCAGGGATAGACATCTTGGCTGCTTATACAAAACTAGCAAGTTTGACAGGGGATATGTCAGACAGTAGATATAGTTTATTCACCGTAATGTCAGGTACATCCATGGCCTGTCCTCATGCCACGGCGGCAGCTGCATATGTTAAGTCATTCCACCCCGACTGGTCTCCGGCTGCGGTCAAGTCTGCTCTCATGACCACTGCAACTCCAATGAAGATCAAATCCAAGGACGCTGTACTTGGCTCTGGAGCAGGACAAATAAATCCAACCAAGGCAGTGCATCCCGGCCTTATTTACAACATTTCATTCAACTCCTACATCTCTTTCCTCTGCAAAGAAGGCTACAACAGCACAACAATCGGCCTACTTGATGGTAACAAGAAGCACAACTGCTCCAAGATCAAGCCTGCACAAGGAACCGATGGTCTCAACTACCCTACAATGCACAAACAGCTCTCAGATCCTGGTTCAGCCATCAAGGCGGTCTTTTATCGAACAGTGACTCATGTCGGGTATGGTCCATCGTTGTACAGGGCAAATATATCATCTCCAGATGGCCTATCTGTCAAAGTTTTTCCAGACACCCTAAATTTTGTTAAGTTACATGAAACGAAAACATTTAAAGTTGTGGTGAAGGGAAAACCTATGCCAGAAGGAATATGGATTCGATCAGCTTTACTTGAATGGAACGACTCTAAACACATAGTTAGAAGCAATATCCTTATCTACAGCAAATTGATCTAA 2124 47.93 MGDLPGGSPSSTVADDHHNLLLDALGDEKIARESKIYSYGKSFNGFAARLLPHEATKLSNEEGVVSVFRSRKQRVVTTRSWDFLGLNHHYSKRNPKIESNLIVAVLDTGIWMDSPSFNDEGYGPPPSKWKGKCVTGPNFTACNNKVIGANYFDLENVSQYPESSVADTEGHGSHTASTVAGSAVEGASLYGLAKGTARGGVPSARIAVYKVCWSIFCSEMDVLAGFDEAIADGVDLISVSIGSPPMDFFRDGQAIGAFHAMKKGILTSCAAGNDGPELSTVENVAPWIMTVAATAIDRRFVTAFKLGNGNKFTGRSINTFSPEKEMYSLTSGAKASNNGTPYQGNASACDPEAISQSKVKGKIVYCLKTYTDPYIKSLGGTGVIQLTRQQADYSSILLLPGVTIPSLSGKYIDLYINSTKNPKAVIYKSKTVRIDAPFVASFSSRGPQFISSNILKPDLSAPGIDILAAYTKLASLTGDMSDSRYSLFTVMSGTSMACPHATAAAAYVKSFHPDWSPAAVKSALMTTATPMKIKSKDAVLGSGAGQINPTKAVHPGLIYNISFNSYISFLCKEGYNSTTIGLLDGNKKHNCSKIKPAQGTDGLNYPTMHKQLSDPGSAIKAVFYRTVTHVGYGPSLYRANISSPDGLSVKVFPDTLNFVKLHETKTFKVVVKGKPMPEGIWIRSALLEWNDSKHIVRSNILIYSKLI 707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 31003134 31007404 - CePI673135_04g011400.1 Cec04g1140 200622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1140 707 ProSitePatterns Serine proteases, subtilase family, serine active site. 493 503 IPR023828 -
Cec04g1140 707 Pfam Peptidase inhibitor I9 10 72 IPR010259 -
Cec04g1140 707 PRINTS Subtilisin serine protease family (S8) signature 167 180 IPR015500 -
Cec04g1140 707 PRINTS Subtilisin serine protease family (S8) signature 492 508 IPR015500 -
Cec04g1140 707 PRINTS Subtilisin serine protease family (S8) signature 98 117 IPR015500 -
Cec04g1140 707 Pfam Subtilase family 99 542 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cec04g1140 707 Gene3D Peptidase S8/S53 domain 101 566 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cec04g1140 707 CDD PA_subtilisin_like 304 426 - -
Cec04g1140 707 CDD Peptidases_S8_3 77 529 IPR034197 -
Cec04g1140 707 SUPERFAMILY Subtilisin-like 91 553 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cec04g1140 707 Pfam Fibronectin type-III domain 603 702 IPR041469 -
Cec04g1140 707 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 75 IPR037045 -
Cec04g1140 707 Gene3D - 570 705 - -
Cec04g1140 707 Gene3D - 297 432 - -
Cec04g1140 707 ProSiteProfiles Serine proteases, subtilase domain profile. 80 553 - -
Cec04g1140 707 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 699 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1140 Cec-Chr4:31003134 Cec07g0699 Cec-Chr7:12653545 6.40E-191 dispersed
Cec10g1933 Cec-Chr10:34076317 Cec04g1140 Cec-Chr4:31003134 8.30E-145 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1140 - - - 0.0