Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec04g1145 | ATGGCGGAAGAGCACAGATGCCAAGCACCTGAAGGCCATCGTCTCTGCGCTAATAATTGCGGCTTCTTCGGTAGCCCAGCTACCATGGATCTCTGCTCCAAATGTTACAGAGACTTCCGTCTTAAAGAACAAGAACAAGCCTCCACCAAATCCACCATCGAAGCCGCTCTCTCGGCCTCATCATCTCCTTCTCCTTCCTCTTCCCCAATCGATCCTCCCCCCGTTCCCCCTGTTGTCGCCTTGTCCCCGCCGGACTCCACCACAGATCTGACCATCCCTCCCCTCGCGGCCGTCGGATCTGAGGCCGCAAACCAACCGAATCCTACTCCGAACCCCAACCCCAACCCAAACCGTTGTTCGTCGTGCCGTAAGAAGGTGGGTTTGACCGGGTTCAAATGCAGATGCGGAACCACGTTCTGTGGGGCTCATAGGTACCCGGAGAAACACGGCTGCGCCTTCGACTTCAAGTCAATTGGAAGAGAGGAGATCGCTCGAGCGAACCCCGTCGTCAAAGCCGATAAACTGGAAAGGATTTGA | 537 | 55.87 | MAEEHRCQAPEGHRLCANNCGFFGSPATMDLCSKCYRDFRLKEQEQASTKSTIEAALSASSSPSPSSSPIDPPPVPPVVALSPPDSTTDLTIPPLAAVGSEAANQPNPTPNPNPNPNRCSSCRKKVGLTGFKCRCGTTFCGAHRYPEKHGCAFDFKSIGREEIARANPVVKADKLERI | 178 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 31069033 | 31069569 | + | CePI673135_04g011450.1 | Cec04g1145 | 200627 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec04g1145 | 178 | MobiDBLite | consensus disorder prediction | 46 | 118 | - | - | |
Cec04g1145 | 178 | ProSiteProfiles | Zinc finger A20-type profile. | 10 | 44 | IPR002653 | GO:0003677(InterPro)|GO:0008270(InterPro) | |
Cec04g1145 | 178 | MobiDBLite | consensus disorder prediction | 48 | 65 | - | - | |
Cec04g1145 | 178 | Gene3D | - | 1 | 69 | - | - | |
Cec04g1145 | 178 | Pfam | AN1-like Zinc finger | 119 | 155 | IPR000058 | GO:0008270(InterPro) | |
Cec04g1145 | 178 | FunFam | Zinc finger AN1-type containing 6 | 96 | 174 | - | - | |
Cec04g1145 | 178 | ProSiteProfiles | Zinc finger AN1-type profile. | 113 | 159 | IPR000058 | GO:0008270(InterPro) | |
Cec04g1145 | 178 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 15 | 58 | - | - | |
Cec04g1145 | 178 | SMART | AN1_Zf_4 | 119 | 156 | IPR000058 | GO:0008270(InterPro) | |
Cec04g1145 | 178 | PANTHER | AN1-TYPE ZINC FINGER PROTEIN | 11 | 178 | IPR050652 | - | |
Cec04g1145 | 178 | SMART | A20_3 | 13 | 37 | IPR002653 | GO:0003677(InterPro)|GO:0008270(InterPro) | |
Cec04g1145 | 178 | SUPERFAMILY | AN1-like Zinc finger | 102 | 173 | IPR035896 | - | |
Cec04g1145 | 178 | MobiDBLite | consensus disorder prediction | 66 | 81 | - | - | |
Cec04g1145 | 178 | Gene3D | - | 96 | 174 | IPR035896 | - | |
Cec04g1145 | 178 | Pfam | A20-like zinc finger | 14 | 37 | IPR002653 | GO:0003677(InterPro)|GO:0008270(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g2332 | Cec-Chr2:40620329 | Cec04g1145 | Cec-Chr4:31069033 | 2.80E-41 | dispersed | |
Cec04g1145 | Cec-Chr4:31069033 | Cec09g0427 | Cec-Chr9:3653577 | 9.50E-35 | dispersed | |
Cec04g1145 | Cec-Chr4:31069033 | Cec01g0346 | Cec-Chr1:3549116 | 2.90E-39 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec04g1145 | - | - | - | 0.0 |