Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1290 ATGGCGTTTGATTTCCACATTCTTCTTCCAATTTTTCTCGTCTCATTACCCTTTCTTTTCATCCTTGTTTCCCTCTTTCTCAAATGGAATCCATATGGACTTCCTTGGAATTGGCCCATTTTAGGAATGATTCCCACCGTAATCCTCCACATCCACCGAATCCATGACCGTATAACCGAAATCTTACAAGTAACTTCTTGCACTTTCTACTTCAAAGGCATTTGGTTCACCAACACCGGCTTCTTAATGACCGTAGATCCTGCCAACATTCACCACATTATGAGCACAAATTTCCAAAATTACCCAAAAGGGCCTGAATTCAAGTACATTTTCGATGTTTTAGGAGATGGAATTTTCAATTCCGATTTCGATTCATGGAAAAATCAACGTAAAATTGCTCAATCTTTGATTGTTCATGAGAAATTTCTTGACTTTATGGCTGGAGCTGCCAAGGAGAAAGTGGAGAATGGGTTGGTGCCAATTCTTGAGTTTTTTTGTGAAAGTAAAAGTTTTGTTGATTTGAAAGATTTGTTTTTGAGATTGGCTTTTGATTCTACTTGTATGATGGTAACTGGGTTTGATCTTAATAGTTTGTCTCTTGAATTCCCCGAAATTCCATTCTCCAAAGCTATGGATGATGTTCAAGAAGTGCTTTTTCTTCGCCATTTGTATCCTAAATTTTATTGGGAGTTGCTTAAGAAACTTGGGATTGGAGAAGCTAAGAGGATGAAGAAGGCTTGTGATATCATTGATCAAGTTATTGCTAACTTGATGGCTGTGAAAAGAGAGCGTTCACAACGAGATCGAGAGTTGAAAGAAGAACAACAAGACCGCGGTGCTGATTTGATCACATGGTATATGGTGAATGAACATGATGAGATCGACTGTAACGACAAGTTCTTGAGAGATACAGTCTTAAACTTCATGATTGCTGGTCGCGATGCTTTGAGTGTAACTCTCTCGTGGCTCTTCTTTATCCTCTCGAAAAATCCTATCATAGCAGCAAAGATTCGAGAAGAGCTGAAAGGCATAACAACAGTTCCACAACATGAATTAGAATCTCAAAACCAACGACAACAAAAACCAAGAGTATTCACCAATGAAGAGCTCAACAACTTGGTTTACTTGCATGGAGCCTTGTGTGAAACCCTTCGTCTCTATCCTCCGATTGCATTTGAGCACAAATCTCCGACGGAACCCGACACGCTTCCGAGTGGCCACCATGTGAAACCTGGTACAAGGATCCTCTTCTCATTGTATGCATTGGGAAGAATGAAGAGTGTTTGGGGACAAGATTGCGAAGAATTCAAACCAGAGAGATGGATTTCTGAAAAAGGGACGGTTAAAAGAGAGCCATCTTATAAGTTCTTTAGTTTCAATGCAGGGCCAAGGACTTGCTTGGGAAAAGGAGTGGCATTTTCCCAATTGAAGATTGTTTCAGCTGCCATTATCTATAACTATGACATTGAAGCTGTTGAAGACATCAACGTTGTTGCTCCAGCTGCTTCTGTGATACTTCACATGAAGAGTGGATTTAAGGTTAAAGTTTCTAAGAGATAA 1560 39.81 MAFDFHILLPIFLVSLPFLFILVSLFLKWNPYGLPWNWPILGMIPTVILHIHRIHDRITEILQVTSCTFYFKGIWFTNTGFLMTVDPANIHHIMSTNFQNYPKGPEFKYIFDVLGDGIFNSDFDSWKNQRKIAQSLIVHEKFLDFMAGAAKEKVENGLVPILEFFCESKSFVDLKDLFLRLAFDSTCMMVTGFDLNSLSLEFPEIPFSKAMDDVQEVLFLRHLYPKFYWELLKKLGIGEAKRMKKACDIIDQVIANLMAVKRERSQRDRELKEEQQDRGADLITWYMVNEHDEIDCNDKFLRDTVLNFMIAGRDALSVTLSWLFFILSKNPIIAAKIREELKGITTVPQHELESQNQRQQKPRVFTNEELNNLVYLHGALCETLRLYPPIAFEHKSPTEPDTLPSGHHVKPGTRILFSLYALGRMKSVWGQDCEEFKPERWISEKGTVKREPSYKFFSFNAGPRTCLGKGVAFSQLKIVSAAIIYNYDIEAVEDINVVAPAASVILHMKSGFKVKVSKR 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 32503877 32506231 + CePI673135_04g012900.1 Cec04g1290 200772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1290 519 PANTHER CYTOCHROME P450 22 512 - -
Cec04g1290 519 Pfam Cytochrome P450 36 497 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1290 519 Coils Coil 257 277 - -
Cec04g1290 519 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1290 519 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1290 519 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1290 519 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1290 519 CDD CYP86A 69 512 - -
Cec04g1290 519 SUPERFAMILY Cytochrome P450 26 519 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1290 519 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1290 519 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1290 519 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1290 519 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1290 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cec04g1290 519 Gene3D Cytochrome P450 23 519 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1290 Cec-Chr4:32503877 Cec04g1292 Cec-Chr4:32538163 8.00E-183 dispersed
Cec04g1290 Cec-Chr4:32503877 Cec04g1291 Cec-Chr4:32517206 8.10E-135 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1290 - - - 0.0