Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec04g1296 | ATGGCTTCCATCAGCTTTTTAGAAATCCTTCTCGCTTTCATACCCTTTCTTTTGGTGCTTTTCCTTCTTTCTCTCAAGTGGAATTTCAATGGGCTTCCTTGGAATTGGCCTGTCTTCGGAATGACTCTCACTATTCTCTCCCATTTTCACCGAATTCATGATCATCTCACTCAAATCTTATACCAATCTTCTTCCACTTTCCTTTTCAAAGGTGTTTGGTTTGCTGATCTTGATTTCTTCTTTACAGCCAACCCTTCTAATATTCACCATATTTTGAGCACCAACTTTGAGCGATATCCCAAAGGCCCTGATTTCAAGTACATCTTTGAAGTTTTGGGAGATGGGATTTTCAACTCTGATTCAGATGCTTGGAAGAATCAACGCAAAACAGCTCATTCCTTGGTCCGGGATGAGAGTTTTCTTCAATTCTTGGAGAAAATTACATTGAAGAAAGTGAAGGAAGGGCTTGTTCCTGTGCTTGAAAGTTTTTGTGAAAATGGGTTGGTATTGGATTTGCAAGATGTGTTTCAGAGGTTCTCCTTTGATTCAACTTGTATGTTGGTCACTGGTTTCGACCTCCATAGTTTGTCTCTTGAATTCCCTCAAGTTCCTTTCTCCAAAGCCATGGATGATGTAGAGGAAGTGATTTTTCTCCGACATTTTTTCCCTAAAAAGATATGGGAATTTCAAAAGAAACTCCAAATTGGACAACCAAAGAGGCTAAAACAAGCTTGGGAAATCATAGATGAAACCATCGCTAAATTGATAGCCTCCAAAAGGGAAAGCTTGCGAAATCAGGTGAAAGAAGAGGGAGTTGATCAGCAAGGAGGAGTTGATTTGATTACATCATATATTACAAATACAAACAAAGATGATAAGTTTTTTAGAGATGTCGTTTTAAATTTCATGATTGCAGGTAGAGACACTCTAAGTTCGGCTCTCTCTTGGTTTTTTTTTTGTCTTTCGAACAATCCAATTGTTGAAGAAAAGATAAGAGAAGAGCTCGAATCAACGATTCCATTAGATGAATCTCATGGTCAATGGCGGATATTTTCTATTGAAGAGTTGAAGAAGCTAGTTTACTTTCACGGGGCTTTATGTGAAGCACTTAGACTTTATCCTCCAGTTCCATATCAACACAAGGTCGCTATGCAACATGATACTCTCCCAAGTGGTCATCATATAAATCCTAAAACAAAGATTGTGTTTTCTTTATATGCATTAGGAAGAATGAGCAATGTGTGGGGGAAAGATTGCATGGAGTTCAAGCCAGAGAGATGGATTTCAGAGAAGGGAAGTATTAAACATGTGCCATCTTACAAATTTTTGGCCTTCAATGCTGGACCAAGAACTTGTTTGGGGAAGGAAGTGGCTTTTACTAAGATGAAATTGGTTGCAGCTACCATTATCCATAACTACAATATTACTCGACAAATAGTACATAAGGTTGTTCCAAATCCTTCTATTATCCTGCATATGAAATATGGATTCAAGGTCAGGATTACAAAGAGATGGTGTTGA | 1521 | 38.13 | MASISFLEILLAFIPFLLVLFLLSLKWNFNGLPWNWPVFGMTLTILSHFHRIHDHLTQILYQSSSTFLFKGVWFADLDFFFTANPSNIHHILSTNFERYPKGPDFKYIFEVLGDGIFNSDSDAWKNQRKTAHSLVRDESFLQFLEKITLKKVKEGLVPVLESFCENGLVLDLQDVFQRFSFDSTCMLVTGFDLHSLSLEFPQVPFSKAMDDVEEVIFLRHFFPKKIWEFQKKLQIGQPKRLKQAWEIIDETIAKLIASKRESLRNQVKEEGVDQQGGVDLITSYITNTNKDDKFFRDVVLNFMIAGRDTLSSALSWFFFCLSNNPIVEEKIREELESTIPLDESHGQWRIFSIEELKKLVYFHGALCEALRLYPPVPYQHKVAMQHDTLPSGHHINPKTKIVFSLYALGRMSNVWGKDCMEFKPERWISEKGSIKHVPSYKFLAFNAGPRTCLGKEVAFTKMKLVAATIIHNYNITRQIVHKVVPNPSIILHMKYGFKVRITKRWC | 506 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 32569455 | 32570975 | + | CePI673135_04g012960.1 | Cec04g1296 | 200778 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec04g1296 | 506 | PRINTS | P450 superfamily signature | 305 | 322 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec04g1296 | 506 | PRINTS | P450 superfamily signature | 364 | 375 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec04g1296 | 506 | PRINTS | P450 superfamily signature | 443 | 452 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec04g1296 | 506 | PRINTS | P450 superfamily signature | 452 | 463 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec04g1296 | 506 | Pfam | Cytochrome P450 | 33 | 477 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec04g1296 | 506 | PRINTS | E-class P450 group I signature | 452 | 475 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec04g1296 | 506 | PRINTS | E-class P450 group I signature | 314 | 340 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec04g1296 | 506 | PRINTS | E-class P450 group I signature | 442 | 452 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec04g1296 | 506 | PRINTS | E-class P450 group I signature | 294 | 311 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec04g1296 | 506 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 445 | 454 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cec04g1296 | 506 | PANTHER | CYTOCHROME P450 | 20 | 497 | - | - | |
| Cec04g1296 | 506 | Gene3D | Cytochrome P450 | 25 | 505 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec04g1296 | 506 | CDD | CYP86A | 67 | 497 | - | - | |
| Cec04g1296 | 506 | SUPERFAMILY | Cytochrome P450 | 27 | 504 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec04g1292 | Cec-Chr4:32538163 | Cec04g1296 | Cec-Chr4:32569455 | 1.50E-247 | dispersed | |
| Cec04g1293 | Cec-Chr4:32549533 | Cec04g1296 | Cec-Chr4:32569455 | 1.30E-238 | dispersed | |
| Cec04g1294 | Cec-Chr4:32558343 | Cec04g1296 | Cec-Chr4:32569455 | 1.80E-150 | dispersed | |
| Cec04g1296 | Cec-Chr4:32569455 | Cec09g0449 | Cec-Chr9:3825796 | 6.50E-97 | dispersed | |
| Cec04g1295 | Cec-Chr4:32559602 | Cec04g1296 | Cec-Chr4:32569455 | 6.50E-37 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec04g1296 | - | - | - | 0.0 |