Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec04g1314 | ATGGGAATCGCTAAAGGTCCATTAATTTTGTCCAATAAGGCAACCAGTTGTGCCAATTCTTCTATGTCCCACGATTATCATCATCATCATCATCAAGGAATCTTCACCTTCTCTAATGGCACCTTGGATAAATCCAATTCCTCCACCCTCCCTCAACACATCCGCCCTGAGAAGCTCCTACTCGACGCCTTCTCCGCCCCTATTCCGCCATCTACGGTGGCCGAAATAGACGAACACCACCCCCACCACCATCACCAACAACAACTTCATCATGTCTATGCCACCACACCTAGTGGGGGGACCATGTTATCCGACATGTTCAATTTCCCTCCAACAACTCCCTCCGCCCCCGTTCCCGTTGAATTCTCCGACAATTTCCGAACTTTACGCCCTCCCAACTCGGCCTCGGCCATGCAACTTTTCTTGATGAACCCTCCTCCACCACCACAACCCCAACCACGATCTCCATCGCCACCTTCTACCTCCTCCACTCTCCACATGCTCCTCCCGAACCCACCTGCGAACGCTCTTCAGGGTTTCGAAGGTGGGGTTGGTGTCGGAGATCAAACGGCTTTCGGTCAATTCGCTGTGGTCGAAAGTCAAGGTCTTTCACTCTCACTTCACTCTTCCTCTTTACAACACTTGGAGGACGCGGCAGCTGCTGCTGCCGTCGCGAAAGCAGATGAATTGAGAATTAGGGATGGTGGGATTTTGTATAATTATAACAACAACAACAATCAAGTCCTTGATGGAGGCGATGGAGGAAGTGGATCAACATCATCAATTTTGCACTATTCTTTTAGAAATAATGAGAATTCTCCTCATAGCTTTCAAGCTCCACAAATAATGAATCCCAACCATCAAGTTCAAATTGGATTTGGGTCATCTTTAGGAGTTGTAAATGTGTTGAGGAATTCAAAATATGCCAAACCTGCACAAGAATTGCTTGAGGAGTTTTGTAGTGTTGGCAAAGTTCAATTGAAGAAAAACAAGTTCAATATTAAGCCAAACCCCGATACCGAAACCGCCACCACCTCTGCCGCCGCTACCGGTGGCTCGAAATCAAAGGATCAACCTCCCTTATCAGCTGCTGACAGAATTGAGCATCAACGGAGAAAGGTCAAACTATTGTCCATGCTTGATGAGGTCGAACGTAGGTACAACCTATATCGAGAGCAAATGCAAATGGTAGTGAACTCGTTCGACCTAGTCATGGGGTTCGGAGCAGCAGCGCCTTACACAACGTTGACGCAGAAGGCGATGTCGAGGCACTTTCGGTGCTTGAAAGACGCGATTGCCGAGCAGCTAAAGCAGAGCTACGAAGCGTTGGGGGAGAAAGGAGGGAATGGAGGGTCAGGAATAACAAAAGGAGAGACACCAAGATTGAAGCTTCTTGAACAAAGCCTTCGCCAACAAAGGGCTTTCCATCAAATGGGAATGATGGAACAAGAAGCTTGGAGGCCACAGCGTGGCCTTCCTGAAAGATCAGTCAACATTCTCAGGGCTTGGCTTTTCGAGCATTTTCTTCACCCGTACCCCAGCGACGCAGACAAGCTTCTGTTAGCTCGACAGACTGGTTTGTCCAGAAATCAGGTCTCGAATTGGTTCATTAATGCAAGAGTTCGATTGTGGAAACCGATGGTGGAAGAAATGTACCAACTTGAAGGGAAAGTGGATACAGATGAATCACAAGATGACACCACACACAATAATAATAATAATAATAATAAAACCCAAAACAATCCCATAAATAATTCACAAAATCCAACCCCCACCACTGCTCCACCCTCAGCCAGCTCCGTGGAAGAAGTAGCGGCGGAGTTCACGGCGGCTCATGAGTACTCAGATCTTCATGATGTGTGGCGACATGGAAGTAGTGGAGATCATCAACAACATTATGGGACCATGTCTGAAGATGTTACAACTGCTGCGGCTGACATGCATCCTGGACCAACACTTATAAGGTTTGGGACCACAAATACGGCCACCGGCGACGTGTCCCTAACTTTAGGCCTCCGCCACACCGGAAATACCTCCGCCGCCGCCGCCGCAGATAACCCTTCTTTCTCCCTAAGAGACTTTGGTCACTCTTGA | 2094 | 48.09 | MGIAKGPLILSNKATSCANSSMSHDYHHHHHQGIFTFSNGTLDKSNSSTLPQHIRPEKLLLDAFSAPIPPSTVAEIDEHHPHHHHQQQLHHVYATTPSGGTMLSDMFNFPPTTPSAPVPVEFSDNFRTLRPPNSASAMQLFLMNPPPPPQPQPRSPSPPSTSSTLHMLLPNPPANALQGFEGGVGVGDQTAFGQFAVVESQGLSLSLHSSSLQHLEDAAAAAAVAKADELRIRDGGILYNYNNNNNQVLDGGDGGSGSTSSILHYSFRNNENSPHSFQAPQIMNPNHQVQIGFGSSLGVVNVLRNSKYAKPAQELLEEFCSVGKVQLKKNKFNIKPNPDTETATTSAAATGGSKSKDQPPLSAADRIEHQRRKVKLLSMLDEVERRYNLYREQMQMVVNSFDLVMGFGAAAPYTTLTQKAMSRHFRCLKDAIAEQLKQSYEALGEKGGNGGSGITKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKLLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQLEGKVDTDESQDDTTHNNNNNNNKTQNNPINNSQNPTPTTAPPSASSVEEVAAEFTAAHEYSDLHDVWRHGSSGDHQQHYGTMSEDVTTAAADMHPGPTLIRFGTTNTATGDVSLTLGLRHTGNTSAAAAADNPSFSLRDFGHS | 697 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 32760880 | 32765855 | + | CePI673135_04g013140.1 | Cec04g1314 | 200796 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec04g1314 | 697 | ProSiteProfiles | 'Homeobox' domain profile. | 483 | 546 | IPR001356 | GO:0003677(InterPro) | |
Cec04g1314 | 697 | CDD | homeodomain | 486 | 547 | IPR001356 | GO:0003677(InterPro) | |
Cec04g1314 | 697 | SUPERFAMILY | Homeodomain-like | 487 | 554 | IPR009057 | - | |
Cec04g1314 | 697 | Pfam | Associated with HOX | 302 | 433 | IPR006563 | - | |
Cec04g1314 | 697 | Gene3D | - | 489 | 551 | - | - | |
Cec04g1314 | 697 | MobiDBLite | consensus disorder prediction | 336 | 357 | - | - | |
Cec04g1314 | 697 | MobiDBLite | consensus disorder prediction | 558 | 603 | - | - | |
Cec04g1314 | 697 | Coils | Coil | 373 | 400 | - | - | |
Cec04g1314 | 697 | SMART | prehox3 | 297 | 434 | IPR006563 | - | |
Cec04g1314 | 697 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 213 | 582 | IPR050224 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER) | |
Cec04g1314 | 697 | MobiDBLite | consensus disorder prediction | 142 | 158 | - | - | |
Cec04g1314 | 697 | MobiDBLite | consensus disorder prediction | 140 | 167 | - | - | |
Cec04g1314 | 697 | MobiDBLite | consensus disorder prediction | 567 | 599 | - | - | |
Cec04g1314 | 697 | SMART | HOX_1 | 486 | 550 | IPR001356 | GO:0003677(InterPro) | |
Cec04g1314 | 697 | MobiDBLite | consensus disorder prediction | 332 | 364 | - | - | |
Cec04g1314 | 697 | FunFam | BEL1-like homeodomain protein 4 | 489 | 551 | - | - | |
Cec04g1314 | 697 | Pfam | Homeobox KN domain | 503 | 542 | IPR008422 | GO:0003677(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g1362 | Cec-Chr2:30712336 | Cec04g1314 | Cec-Chr4:32760880 | 4.40E-130 | dispersed | |
Cec03g0289 | Cec-Chr3:3276003 | Cec04g1314 | Cec-Chr4:32760880 | 2.10E-62 | dispersed | |
Cec04g0909 | Cec-Chr4:28829256 | Cec04g1314 | Cec-Chr4:32760880 | 2.20E-51 | dispersed | |
Cec04g1314 | Cec-Chr4:32760880 | Cec11g0426 | Cec-Chr11:4464511 | 9.10E-73 | dispersed | |
Cec04g1314 | Cec-Chr4:32760880 | Cec10g1845 | Cec-Chr10:33299423 | 2.30E-68 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29344 | PF07526 | POX | 9.90E-49 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec04g1314 | - | - | - | 0.0 |