Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1325 ATGATCGTGTCGACCACTTCTCTCACCAGCTTCCAAGGAGGGGATGATTCTGTTTGTTCCTTGTTCAGTTGGAGTAAGTTGCAGTCAATTATGACTTTGCATCGAAACTTTTTGATCGTTGTAATCGCTATTTTCTCGGCTTCTTTAACAATCGCCGAGGAGTTAAGGTCCTGCGAAACCGGAAATTGGGCTGAATCTGTACGCTATCCGTTTGGATTCTCAAACTCGAGCCTAATCAAATTGAATTGCAGCAAAAATGGCGAGATTCAAATCGGCAGATTCCAGGTCCAGAACATTACTGAAGGGAGCATCCTCATCAAACTTCCTACAGAGTGCAATATCTCTATCAATTCAATTTCAGAATTGTCCAGCCCAAACTACAAGCCCACTCTCCGCAACAGTCTCCTGTTGAATTGTTCCGAACAACCACTGCCATGCGGAGTAATGGCCAATTTGAGCCTGAATCAGCCAACGGACTGCGGCTTTAAGAGTAATAATCTCAGCTGCTTCACCAGGACCGAGCAAAATGGATTTCTGCCTCCTTTAAATAAGTGCCACTCCCTTCTGTCCTCCGTATTCGTTAATTTTACGTCAAAATCAACCTCTTCGTTCGAGGTCGAGTTTGGGGTCATTGAGTTAGAGTGGTGGCTCTCACCTTTGCCTTCCGTACGATGCTCAAAAAATGCCAATCGCGCGAACATTACCAGCTTGACGGAGAACCTAGGATTTCGTTGCCAGTGCATAGAAGGGTTTGAAGGAAATGCTTATGGCGACGTCGGCGGCGGCTGCCGGAAAGTTTCTCACAAGTGCAATACTTCAACATACATTACTGGCCGATGTGGCGGAAGCAAAGTCACTGCTCTAATTGCAGGTGTCGTTGTTGGGGCTTTTCTAATGGCTGTCCTGACCCTCATCTGTTACTGCATCCGACGCCGCTCAATGTGTCTGAAAGGTCAGATGAGTGCGAAGCGGCTTCTAAGTGAGGCTGCCGGAAATTCCAGTGTTACTTTATATCCCTACAAAGAAATAGAAAGAGCCACTAATGGCTTCTCTGAGAAACAAAGGCTGGGAACTGGAGCCTTCGGTACAGTCTATGCCGGAAGGCTTCACGAGGACGAGTGGGTTGCTGTAAAAAAGATCAAATATAGAGACCACAATAGCATTGACCAGGTTATGAATGAGATAAAACTGCTTTCCTCGGTGAGCCACCCAAATCTGGTCCGCTTGCTTGGCTGCTGCATTGAGGAAGGCCAACAGATCCTTGTCTATGAGTTTATGCCCAATGGAACTCTCTCTCAGCATCTTCAGAGAGAGCGTGGAAATGGACTCCCATGGACGACACGTCTCACCATTGCAGCCGAAACTTCTCGTGCAATAGCATACCTCCATTCTTCTGTGCATCCACCAATATATCATAGAGACATCAAATCAAGCAATATACTTCTGGATCATGGTTTCAAATCAAAAGTTGCAGATTTTGGTCTTTCACGACTTGGTATGACAGAAATATCACACGTCTCAACAGCTCCACAAGGCACCCCTGGTTACGTTGATCCACAATACCATCAAAATTTTTATCTTTCAGATAAAAGTGATGTATATAGTTTTGGAGTAGTCCTCGTAGAGATAATAACAGCATTGAAAGTGGTTGATTTCACTCGTCCCCAGAGTGAAGTGAACTTAGCTGCACTTGCCATTGATAGGATTGGGAGAAATTCTGTGGATGAATTAATTGATCCTTTCCTCGAGCCACATAGAGATGCTTGGACCCTATACTCTATTCACAAGGTGGCTGAGCTTGCATTCAGATGCCTTGCTTTCCATAGTGACATGAGGCCTTCGATGACAGAAGTAGCAGAGGAATTGGAAAACATCAGACGCAGCGGGTGGACATCAATGGAGGAGCATTTTTGTGCAGCATCATCAGCAGGGTCGGCTTGCTCATCTCCTCGTAGTCTAAGCGAGAGATCCATAAGTAGCATTACAATTAAGAAGGCTGGGTTGCTTGCAGGACTGGGGAGCCAGAGATTGATAATCCCGCCGGATAACAACCATACGAAGGACTATCTGCCTCCTGTAGAGGAGGTTATGGATAGTTCCCCAGTTTCAATACAGGATCCTTGGTTAAGTGAACAAAGCTCACCTTCAACAAATAGTTTATTGGGTAATGTAGCACGGTGA 2181 45.58 MIVSTTSLTSFQGGDDSVCSLFSWSKLQSIMTLHRNFLIVVIAIFSASLTIAEELRSCETGNWAESVRYPFGFSNSSLIKLNCSKNGEIQIGRFQVQNITEGSILIKLPTECNISINSISELSSPNYKPTLRNSLLLNCSEQPLPCGVMANLSLNQPTDCGFKSNNLSCFTRTEQNGFLPPLNKCHSLLSSVFVNFTSKSTSSFEVEFGVIELEWWLSPLPSVRCSKNANRANITSLTENLGFRCQCIEGFEGNAYGDVGGGCRKVSHKCNTSTYITGRCGGSKVTALIAGVVVGAFLMAVLTLICYCIRRRSMCLKGQMSAKRLLSEAAGNSSVTLYPYKEIERATNGFSEKQRLGTGAFGTVYAGRLHEDEWVAVKKIKYRDHNSIDQVMNEIKLLSSVSHPNLVRLLGCCIEEGQQILVYEFMPNGTLSQHLQRERGNGLPWTTRLTIAAETSRAIAYLHSSVHPPIYHRDIKSSNILLDHGFKSKVADFGLSRLGMTEISHVSTAPQGTPGYVDPQYHQNFYLSDKSDVYSFGVVLVEIITALKVVDFTRPQSEVNLAALAIDRIGRNSVDELIDPFLEPHRDAWTLYSIHKVAELAFRCLAFHSDMRPSMTEVAEELENIRRSGWTSMEEHFCAASSAGSACSSPRSLSERSISSITIKKAGLLAGLGSQRLIIPPDNNHTKDYLPPVEEVMDSSPVSIQDPWLSEQSSPSTNSLLGNVAR 726
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 32855860 32859946 - CePI673135_04g013250.1 Cec04g1325 200807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1325 726 ProSitePatterns Protein kinases ATP-binding region signature. 356 379 IPR017441 GO:0005524(InterPro)
Cec04g1325 726 FunFam Wall-associated receptor kinase-like 14 317 425 - -
Cec04g1325 726 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 54 712 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Cec04g1325 726 SMART serkin_6 350 631 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1325 726 Pfam Protein tyrosine and serine/threonine kinase 353 622 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1325 726 MobiDBLite consensus disorder prediction 701 726 - -
Cec04g1325 726 SUPERFAMILY Protein kinase-like (PK-like) 330 623 IPR011009 -
Cec04g1325 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1325 726 MobiDBLite consensus disorder prediction 703 726 - -
Cec04g1325 726 ProSiteProfiles Protein kinase domain profile. 350 625 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1325 726 FunFam Wall-associated receptor kinase-like 20 426 635 - -
Cec04g1325 726 CDD TM_EGFR-like 282 313 - -
Cec04g1325 726 Gene3D Phosphorylase Kinase; domain 1 312 425 - -
Cec04g1325 726 Gene3D Transferase(Phosphotransferase) domain 1 426 642 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1129 Cec-Chr3:24499863 Cec04g1325 Cec-Chr4:32855860 4.10E-47 dispersed
Cec04g1325 Cec-Chr4:32855860 Cec07g1596 Cec-Chr7:31493977 1.70E-77 dispersed
Cec04g1325 Cec-Chr4:32855860 Cec08g1591 Cec-Chr8:27434217 1.20E-163 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71920 PF07714 PK_Tyr_Ser-Thr 5.20E-45 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1325 - - - 0.0