Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1340 ATGATGCTTACTTTGGAAGTTGAATTTGTCACAGCAACCATTTTTGGTGATGGGCAGGCCAAAGAAGGTTTCAAAGCCGACACCTTTTCAGATTCCAGCTCTTTCTTAATTTCCCAAGTAATTGGATCCCTGCAGTGGCTGCTGTACTTAATTAAACAGCATATCTTACTGGTGGCGGCACTAAGGTTTCTGAGTAGCCATGGCCGATTTCCAGACCTCGACTCAACGGGCCAAATGGATCTTGTCTCCTCAGGAGCTGGTTCAGGAGCATATTTTGTTTCTTTAGATTGCTTTATCAAGCAACTGGAGTTTCTTACTTCTATGGTACTTGTGCCAACATGTGGTCTTCCAGATGACTTATTTGATAAATCAGCTGGACGATTGTTGGCTTTTGAGGAGTTTTACTGGTTTTTTCGCACTCAATGCAGAGTCAATAATGTTTACAGGTACAAAGCTGCTAACCAGAGAGCGATCGAAGCTCTCGAGAAGTTTGGAGCAACACTAATGGAAGTAGATGCTGACGGATCATTGTCATATCCAGACCCTCAGATAAATTCAAAAGATAATACTGACAAACATTCTCGCTCCAAATCGTTGAGTATTGAAGAAGAGCAATTTATGCGAGTATTTTACGAAAACAAACTTCAAGAAGTATGCAACAACTTTCATTTTCCTCATAAAATCCAGGCAACAGCTCTAATATATTTTAAAAGATTCTACCTACAATGGTCCGTGATGCAGCATAATCCAAAAAATGTGATGTTAACCTGCATTTATGCAGCTTGTAAGATAGAAGAAAATCACGTCTCGGCTGAGGAGCTTGGTAAGGGGATTTCACAGGATCATCAAATTATCCTCAATTATGAGATGATAGTTTATCAGAGTCTGGAATTTGATCTTATTGTTTATGCACCTTACCGATCAGTTGAAGGCTATGTAAATGATATCGAGGAACTCTTCAATGAGAATGTTGAAATGCTTCAAATGCTAAAGGTAATTGCCCCATTGTTCAATGTAATTGATACCGTAGTATGGCAAACAGCATCATTAGAGGTTGATAAAATTATGTTAACAGATGCCCCACTTCTCTTCCCCCCTGGGCAGTTAGCACTGGCTGCATTGCGCAGATCAAATGAAGTTCATGGAGTTATTGACTTTGATAGGTACCTGGATAGTATCCTCTCTCGCCAGATTTCTGCACATACAATTTCCGAGCTCTACGAGCGTATAAATTCAATTGAATCATTGGTTAATAGATATACATTCCCTTCAGAAAAGGATTTAAAGCACATCAACCGAAAACTAAAATCTTGCTGGGGGCTGGGCTCCAATGACGAGTATTTTATTCAATCATGCGATACCTTAAGAATTAGTCTACCTCTTCCTTAG 1389 39.67 MMLTLEVEFVTATIFGDGQAKEGFKADTFSDSSSFLISQVIGSLQWLLYLIKQHILLVAALRFLSSHGRFPDLDSTGQMDLVSSGAGSGAYFVSLDCFIKQLEFLTSMVLVPTCGLPDDLFDKSAGRLLAFEEFYWFFRTQCRVNNVYRYKAANQRAIEALEKFGATLMEVDADGSLSYPDPQINSKDNTDKHSRSKSLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQSLEFDLIVYAPYRSVEGYVNDIEELFNENVEMLQMLKVIAPLFNVIDTVVWQTASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFDRYLDSILSRQISAHTISELYERINSIESLVNRYTFPSEKDLKHINRKLKSCWGLGSNDEYFIQSCDTLRISLPLP 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 33031004 33044529 + CePI673135_04g013400.1 Cec04g1340 200822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1340 462 Gene3D - 303 419 - -
Cec04g1340 462 Pfam Cyclin C-terminal domain 305 417 IPR031658 -
Cec04g1340 462 SUPERFAMILY Cyclin-like 192 302 IPR036915 -
Cec04g1340 462 FunFam cyclin-H1-1 189 301 - -
Cec04g1340 462 CDD CYCLIN_AcCycH_rpt2 303 438 - -
Cec04g1340 462 CDD CYCLIN_AcCycH_rpt1 149 300 - -
Cec04g1340 462 SMART cyclin_7 213 294 IPR013763 -
Cec04g1340 462 SUPERFAMILY Cyclin-like 305 440 IPR036915 -
Cec04g1340 462 Gene3D - 189 301 - -
Cec04g1340 462 Pfam Cyclin, N-terminal domain 201 300 IPR006671 -
Cec04g1340 462 PANTHER CYCLIN 187 438 IPR043198 GO:0000079(PANTHER)|GO:0005634(PANTHER)|GO:0006357(PANTHER)|GO:0006357(InterPro)|GO:0016538(PANTHER)|GO:0016538(InterPro)|GO:0070816(PANTHER)|GO:0070985(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1340 K06634 - csv:101220754 535.028