Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1353 ATGCGTTGGTTGCGTAACATCTCCTTTACCCCTTCTTCAATGGTGAGAATTCCGGGAACTGGCACAGGTGGTGATTCTCCAACCAGAAGGACTACTACCAGAGGCTCCGACGATCATAATTATCGGGGAATTGTTTGGCGTTTTGGTGCCTCTAAGTATTCCCGCCATAGGAAGCTTCGGAACCTAAGCGGACGTGAACGCGACGCTACTTCTTTGGCTAAATGGTCCGATACTACGCCTGAGCCTGTCTCTTTGTCGCGATCGCCGAGTACTTCTGATGACCATGCCGTCCCCTTGCCGCTCCCGGAGGTTTCTCCCTTATTTCAGCGTCGTGAAGGAATCTCCAATTTGAATTCTGCAGGTGGAGATGGGGATTGCCCTCTTCCATCGCCCAAGGGTTGGCGTGGACGCGGTGGGGACGATCGCGATGTAGATAGAGATAGAACTACACCTCCTCATAAGATTGGGGGTGCGGCCTCCCCTACCGCTCCGATTAAAAGTATATCTGATTCCGGGGAAAAGCAGAGGAAAGAAGATCAGAATGAGACGAGGTCATCTGGGAGGGCGAATCAAGATGCAAGAGGATATCCTGAAAGTTCCCGGAACGGTTTTTGGATTGATGTTCCCAGTAGGAGTGCTCCTACTAGTCCTTATGCAAGTCCTACACTCAGTCCCCAAAGAAATAGGTCCGGTAACCTTTCAAATTTCTATCATGTGATTCCAGTAGGAAACCAAGGCTGGTCTTCACCTGAGCTACCAAGTTTCCCTTATGCTGCTCCAGTTGGAAATCATGGCTGGTCTGCACCTGAGCTGCCATCCTCAGCAATGATGCGGGGGGTTCCTCCTGCGTTCTTTGATTGCTCCACTCTTAGTTCTGAGAGTTCTCCCATGCATAGCCCAAGAGGTAGAAGTCCCCACCGAGATCCCAGAAGTCCAACAGGAGCTACGTCTCCATTGCACACCAAGATTTCCCTTGAAACACATGCTGTGCGCCGTGAAGGTTCTGGTCATGTCAGTGTCCACCCTTTACCTCTTCCCCCTGGAGTGCCAATGCCTTCAGCATCAATCCCATCAATGGCTTCACCATCAACCTCCATGCCTCTACAATCAACCCCTGTGCCTTCCCCATCAATTCCAATGCCTTCAGCATCATCCCCAATGGCTTCACCATCAACCCCAATGGCTTCACAATCAACCCCAATTACACAAGCTAACACCAAAACTGAGTCGACCTCAATGAAAAATAAATGGCAGAAAGGAAAGCTTATAGGCCGGGGCACATTCGGAAGTGTATATGTTGCTAGCAACAGAGAAAATGGAGCTTTATGTGCAATGAAGGAAGTTGAACTATTTCATGACGATCCGAAGTCAGCTGAATCTATAAAGCAATTAGAACAGGAGATCAAACTTCTGAGCCAGCTAAAGCATCCAAATATTGTCCAGTACTATGGTTGTGATAGTGTTGAAGATCGATTATATATATACCTGGAGTATGTTCATCCTGGTTCAATTAATAAATATGTTCGTGAACATTGTGGAGCCATGACAGAATCTGTTGTTCGAAATTTTACTTGGCACATTCTCTCAGGGTTGGCCTACTTGCACAGCACAAAGACTATACACCGGGACATTAAAGGTGCTAATTTGCTTGTAGACTCTTGTGGGGTTGTCAAGCTTGCTGACTTTGGAATGGCTAAACATCTCACAGGACAAGTTGCTGATCTCTCTCTAAAGGGAAGTCCATACTGGATGGCTCCTGAGCTACTTCTGTCTGTGATGCAGAAAGATAACAGCCCAGATCTTGCCCTAGCAGTTGATATTTGGAGCCTTGGTTGCACTATTATAGAAATGTTCACTGGCAAACCACCTTGGAGCGAGTATGAAGGGGCTGCAGCTATGTTTAAGGTCATAAGAGATACCCCACCAATACCTGAAACATTATCATATGAAGCCAGCGATTTCTTAAAATGCTGCTTTCAGAGAAATCCTGCAGAGAGACCGACCGCTGCAATGCTGCTTGAACATCCATTCATGAAAAACTTGCAGCATCCAGATGCTTCATCTTGCTCTCAGGCCGTTGCTGGGGCAAGTTTGATGGATAAATGCTATAGCCCAAGTAAACAATATTCAAGTAAATTTGATCAGTCTTCCATGCTTCCAAGCTCACAAAACTCCAAGGGAAAGTTAGCGGCCGAGAGTGTGATTGGCCCACCATCTCGTCATGAAACCTCTGACTTAACAGTAATGTCTCGTTATTCCCCTCGTTCTACCCTTGAGGCTCTTCCAATACTGTCTCCTCCGCGCTCGGTTCCAAATGTGCATCATCTCGGTTCCCCTACAAATGTGGCCGGCCTGCCTCCAGCTTTGCTCGCACCTTCAATCGATGAGCATTTGGCAAGGGTGGTAAAGTATCGGCGAAAGCTCAGCTTCATGACAAGAAGCCAGACTCATGCTGCGTCTAGTAGAGCTTCAGTAATGGCGACATCCACTGATCCTTCCTTGGTGTTGGCGTGGGAAAATCACCACTTCCATAGTTCAATGTACAACTTCAAACTGAATTTGTACATATTAGAGAGAGGGTGGTGGTGGTACCACGTGAAAGTTCCATCATTCCAACCCAATTCTGGCGAGAGTACCATTTGTAATTCCCAGGAACAGAGAGTTGTTCTTGCTGTTATGACTGCTCGGAAAGCTGGTTTCATTACTTGTGCTGTTGGGATGTTTCTTCTTCGCCTTGCTTCACTCATCACTAATCATTAA 2760 47.14 MRWLRNISFTPSSMVRIPGTGTGGDSPTRRTTTRGSDDHNYRGIVWRFGASKYSRHRKLRNLSGRERDATSLAKWSDTTPEPVSLSRSPSTSDDHAVPLPLPEVSPLFQRREGISNLNSAGGDGDCPLPSPKGWRGRGGDDRDVDRDRTTPPHKIGGAASPTAPIKSISDSGEKQRKEDQNETRSSGRANQDARGYPESSRNGFWIDVPSRSAPTSPYASPTLSPQRNRSGNLSNFYHVIPVGNQGWSSPELPSFPYAAPVGNHGWSAPELPSSAMMRGVPPAFFDCSTLSSESSPMHSPRGRSPHRDPRSPTGATSPLHTKISLETHAVRREGSGHVSVHPLPLPPGVPMPSASIPSMASPSTSMPLQSTPVPSPSIPMPSASSPMASPSTPMASQSTPITQANTKTESTSMKNKWQKGKLIGRGTFGSVYVASNRENGALCAMKEVELFHDDPKSAESIKQLEQEIKLLSQLKHPNIVQYYGCDSVEDRLYIYLEYVHPGSINKYVREHCGAMTESVVRNFTWHILSGLAYLHSTKTIHRDIKGANLLVDSCGVVKLADFGMAKHLTGQVADLSLKGSPYWMAPELLLSVMQKDNSPDLALAVDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVIRDTPPIPETLSYEASDFLKCCFQRNPAERPTAAMLLEHPFMKNLQHPDASSCSQAVAGASLMDKCYSPSKQYSSKFDQSSMLPSSQNSKGKLAAESVIGPPSRHETSDLTVMSRYSPRSTLEALPILSPPRSVPNVHHLGSPTNVAGLPPALLAPSIDEHLARVVKYRRKLSFMTRSQTHAASSRASVMATSTDPSLVLAWENHHFHSSMYNFKLNLYILERGWWWYHVKVPSFQPNSGESTICNSQEQRVVLAVMTARKAGFITCAVGMFLLRLASLITNH 919
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 33166806 33174907 + CePI673135_04g013530.1 Cec04g1353 200835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1353 919 MobiDBLite consensus disorder prediction 13 39 - -
Cec04g1353 919 MobiDBLite consensus disorder prediction 384 416 - -
Cec04g1353 919 SUPERFAMILY Protein kinase-like (PK-like) 401 722 IPR011009 -
Cec04g1353 919 ProSitePatterns Protein kinases ATP-binding region signature. 423 446 IPR017441 GO:0005524(InterPro)
Cec04g1353 919 ProSiteProfiles Protein kinase domain profile. 417 678 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1353 919 MobiDBLite consensus disorder prediction 213 229 - -
Cec04g1353 919 MobiDBLite consensus disorder prediction 135 152 - -
Cec04g1353 919 MobiDBLite consensus disorder prediction 288 416 - -
Cec04g1353 919 MobiDBLite consensus disorder prediction 170 185 - -
Cec04g1353 919 FunFam Mitogen-activated protein kinase kinase kinase 5 414 715 - -
Cec04g1353 919 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 166 684 IPR050538 -
Cec04g1353 919 SMART serkin_6 417 678 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1353 919 MobiDBLite consensus disorder prediction 13 30 - -
Cec04g1353 919 MobiDBLite consensus disorder prediction 356 371 - -
Cec04g1353 919 MobiDBLite consensus disorder prediction 73 93 - -
Cec04g1353 919 Pfam Protein kinase domain 418 678 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1353 919 MobiDBLite consensus disorder prediction 64 229 - -
Cec04g1353 919 MobiDBLite consensus disorder prediction 710 729 - -
Cec04g1353 919 Gene3D Transferase(Phosphotransferase) domain 1 413 717 - -
Cec04g1353 919 MobiDBLite consensus disorder prediction 710 744 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0458 Cec-Chr1:4732728 Cec04g1353 Cec-Chr4:33166806 9.70E-96 dispersed
Cec04g1353 Cec-Chr4:33166806 Cec05g0983 Cec-Chr5:8598472 7.70E-96 dispersed
Cec04g1353 Cec-Chr4:33166806 Cec08g1606 Cec-Chr8:27519636 1.00E-140 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71921 PF00069 Pkinase 3.10E-68 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1353 - - - 0.0