Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1381 ATGTCTGATCACAAATCAGGCTCCATGGCCGATCAGCTCTCTAAGCAGACCTCTATTTTTGGCCTACGCTTGTGGGTTGTTCTTGGGGTTTGTGTTGGAGCCGCGTTTGTGCTCTTTCTGTTTCTAATTTCTCTTTGGATTGCTTCTAAACGCTCCCGCAAGAAGATTTCTCACAGACCCACTATCCCAATCGTCTCCAAAGAAATCCAAGAGATCAGAGTCGATCATGCCCTCGCTCAAAACCAAGAACATAAGCCGAGTAGGTCCCATTTTCAGGTCGACCCACTTCCGGAGCCGGAACCAATCCCTGGAATTGAGCGGCAGGCGTTGCTTTCGTTGCCTCAGGAGGAAGAGCGAGTGAATAGGATTCATATTGAGATCGGGAAAGATCATAGGATTTCATATCCTGAGCGCCTTGGTCGGTCGTCTTCCTCACAGGGGAGTGGAGAGGGCCGATGTGGTGGCGATCAGTTGCCTATGGTGGTGCCTGAAGTTTCGCATTTGGGTTGGGGACACTGGTACACTCTCAGAGAGCTTGAAGCTTCCACTAATGGTTTCGCCCCCGACAATGTAATTGGCGAGGGTGGGTATGGAATTGTTTACCATGGCATATTGGAAGATGGAACTCAGGTTGCTGTGAAGAATTTGCTAAACAATAGGGGCCAAGCCGAGAAGGAGTTTAAAGTTGAAGTTGAAGCAATTGGACGAGTTAGACATAAGAACTTAGTTAGACTGCTTGGATACTGTGCTGAAGGTGCTCATAGGATGCTTGTATATGAGTATATAAATAATGGAAACTTGGAACAATGGCTTCATGGGGATGTGGGATCTTTCAGCCCTCTTACCTGGGAGATTAGAATGAATATCATTCTTGGAACCGCAAAAGGGCTAGCTTACCTTCACGAGGGATTGGAACCAAAGGTTGTTCACCGGGATATCAAATCAAGCAATATCTTACTCGATAAGCAATGGAATTCCAAGGTTTCAGATTTTGGGCTTGCAAAGCTACTATACTCTGATAATAGTTATATTACAACCCGAGTAATGGGGACATTTGGCTATGTAGCACCAGAATATGCAAGTACGGGAATGCTAAATGAAAGAAGTGATGTGTATAGTTTTGGAATACTTGTTATGGAAATAATCTCGGGACGTAATCCCGTTGAGTATAGTCGTCCTCCAGATGAGGTGAACTTGATCGATTGGCTCAAGAGAATGGTCACTAACCAAAATCCAGAGGGCGTATTGGATCCAAAGCTTTCTGAAAAGCCTACTTCAAGAGCATTAAAGCGGGCTCTACTTGTTGCATTACGCTGCGTGGACCCAAATGCTCAGAAACGGCCAAAAATGGGACATATTATTCATATGCTTGAAGCCGAAGATGCTAACTTTAAAGGGGTTCGCAAAGCTGGAAAGGACCCAGAGAATTCACATTCAAACAATGTCAAAGATGGTTTAAATGAAAGGCAGGCAACAGAATTAGGTGGCAGCAGTGTCAATGGACTCAGTACTCGACAACGAGATATGTGA 1530 45.1 MSDHKSGSMADQLSKQTSIFGLRLWVVLGVCVGAAFVLFLFLISLWIASKRSRKKISHRPTIPIVSKEIQEIRVDHALAQNQEHKPSRSHFQVDPLPEPEPIPGIERQALLSLPQEEERVNRIHIEIGKDHRISYPERLGRSSSSQGSGEGRCGGDQLPMVVPEVSHLGWGHWYTLRELEASTNGFAPDNVIGEGGYGIVYHGILEDGTQVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYINNGNLEQWLHGDVGSFSPLTWEIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKQWNSKVSDFGLAKLLYSDNSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILVMEIISGRNPVEYSRPPDEVNLIDWLKRMVTNQNPEGVLDPKLSEKPTSRALKRALLVALRCVDPNAQKRPKMGHIIHMLEAEDANFKGVRKAGKDPENSHSNNVKDGLNERQATELGGSSVNGLSTRQRDM 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 33448330 33450932 - CePI673135_04g013810.1 Cec04g1381 200863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1381 509 MobiDBLite consensus disorder prediction 467 509 - -
Cec04g1381 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1381 509 ProSitePatterns Protein kinases ATP-binding region signature. 192 214 IPR017441 GO:0005524(InterPro)
Cec04g1381 509 PANTHER OS01G0323000 PROTEIN 8 484 IPR052232 -
Cec04g1381 509 Pfam Protein kinase domain 190 455 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1381 509 ProSiteProfiles Protein kinase domain profile. 186 464 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1381 509 FunFam Putative receptor-like serine/threonine-protein kinase 262 472 - -
Cec04g1381 509 Gene3D Transferase(Phosphotransferase) domain 1 262 470 - -
Cec04g1381 509 SUPERFAMILY Protein kinase-like (PK-like) 167 458 IPR011009 -
Cec04g1381 509 FunFam Probable serine/threonine-protein kinase At1g01540 166 261 - -
Cec04g1381 509 CDD STKc_IRAK 192 458 - -
Cec04g1381 509 SMART serkin_6 186 457 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1381 509 Gene3D Phosphorylase Kinase; domain 1 167 261 - -
Cec04g1381 509 MobiDBLite consensus disorder prediction 480 509 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1381 Cec-Chr4:33448330 Cec05g0161 Cec-Chr5:1373772 1.90E-165 dispersed
Cec04g1381 Cec-Chr4:33448330 Cec08g1662 Cec-Chr8:27947811 2.70E-199 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71924 PF00069 Pkinase 1.10E-47 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1381 - - - 0.0