Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec04g1381 | ATGTCTGATCACAAATCAGGCTCCATGGCCGATCAGCTCTCTAAGCAGACCTCTATTTTTGGCCTACGCTTGTGGGTTGTTCTTGGGGTTTGTGTTGGAGCCGCGTTTGTGCTCTTTCTGTTTCTAATTTCTCTTTGGATTGCTTCTAAACGCTCCCGCAAGAAGATTTCTCACAGACCCACTATCCCAATCGTCTCCAAAGAAATCCAAGAGATCAGAGTCGATCATGCCCTCGCTCAAAACCAAGAACATAAGCCGAGTAGGTCCCATTTTCAGGTCGACCCACTTCCGGAGCCGGAACCAATCCCTGGAATTGAGCGGCAGGCGTTGCTTTCGTTGCCTCAGGAGGAAGAGCGAGTGAATAGGATTCATATTGAGATCGGGAAAGATCATAGGATTTCATATCCTGAGCGCCTTGGTCGGTCGTCTTCCTCACAGGGGAGTGGAGAGGGCCGATGTGGTGGCGATCAGTTGCCTATGGTGGTGCCTGAAGTTTCGCATTTGGGTTGGGGACACTGGTACACTCTCAGAGAGCTTGAAGCTTCCACTAATGGTTTCGCCCCCGACAATGTAATTGGCGAGGGTGGGTATGGAATTGTTTACCATGGCATATTGGAAGATGGAACTCAGGTTGCTGTGAAGAATTTGCTAAACAATAGGGGCCAAGCCGAGAAGGAGTTTAAAGTTGAAGTTGAAGCAATTGGACGAGTTAGACATAAGAACTTAGTTAGACTGCTTGGATACTGTGCTGAAGGTGCTCATAGGATGCTTGTATATGAGTATATAAATAATGGAAACTTGGAACAATGGCTTCATGGGGATGTGGGATCTTTCAGCCCTCTTACCTGGGAGATTAGAATGAATATCATTCTTGGAACCGCAAAAGGGCTAGCTTACCTTCACGAGGGATTGGAACCAAAGGTTGTTCACCGGGATATCAAATCAAGCAATATCTTACTCGATAAGCAATGGAATTCCAAGGTTTCAGATTTTGGGCTTGCAAAGCTACTATACTCTGATAATAGTTATATTACAACCCGAGTAATGGGGACATTTGGCTATGTAGCACCAGAATATGCAAGTACGGGAATGCTAAATGAAAGAAGTGATGTGTATAGTTTTGGAATACTTGTTATGGAAATAATCTCGGGACGTAATCCCGTTGAGTATAGTCGTCCTCCAGATGAGGTGAACTTGATCGATTGGCTCAAGAGAATGGTCACTAACCAAAATCCAGAGGGCGTATTGGATCCAAAGCTTTCTGAAAAGCCTACTTCAAGAGCATTAAAGCGGGCTCTACTTGTTGCATTACGCTGCGTGGACCCAAATGCTCAGAAACGGCCAAAAATGGGACATATTATTCATATGCTTGAAGCCGAAGATGCTAACTTTAAAGGGGTTCGCAAAGCTGGAAAGGACCCAGAGAATTCACATTCAAACAATGTCAAAGATGGTTTAAATGAAAGGCAGGCAACAGAATTAGGTGGCAGCAGTGTCAATGGACTCAGTACTCGACAACGAGATATGTGA | 1530 | 45.1 | MSDHKSGSMADQLSKQTSIFGLRLWVVLGVCVGAAFVLFLFLISLWIASKRSRKKISHRPTIPIVSKEIQEIRVDHALAQNQEHKPSRSHFQVDPLPEPEPIPGIERQALLSLPQEEERVNRIHIEIGKDHRISYPERLGRSSSSQGSGEGRCGGDQLPMVVPEVSHLGWGHWYTLRELEASTNGFAPDNVIGEGGYGIVYHGILEDGTQVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYINNGNLEQWLHGDVGSFSPLTWEIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKQWNSKVSDFGLAKLLYSDNSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILVMEIISGRNPVEYSRPPDEVNLIDWLKRMVTNQNPEGVLDPKLSEKPTSRALKRALLVALRCVDPNAQKRPKMGHIIHMLEAEDANFKGVRKAGKDPENSHSNNVKDGLNERQATELGGSSVNGLSTRQRDM | 509 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 33448330 | 33450932 | - | CePI673135_04g013810.1 | Cec04g1381 | 200863 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec04g1381 | 509 | MobiDBLite | consensus disorder prediction | 467 | 509 | - | - | |
Cec04g1381 | 509 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 308 | 320 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec04g1381 | 509 | ProSitePatterns | Protein kinases ATP-binding region signature. | 192 | 214 | IPR017441 | GO:0005524(InterPro) | |
Cec04g1381 | 509 | PANTHER | OS01G0323000 PROTEIN | 8 | 484 | IPR052232 | - | |
Cec04g1381 | 509 | Pfam | Protein kinase domain | 190 | 455 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec04g1381 | 509 | ProSiteProfiles | Protein kinase domain profile. | 186 | 464 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec04g1381 | 509 | FunFam | Putative receptor-like serine/threonine-protein kinase | 262 | 472 | - | - | |
Cec04g1381 | 509 | Gene3D | Transferase(Phosphotransferase) domain 1 | 262 | 470 | - | - | |
Cec04g1381 | 509 | SUPERFAMILY | Protein kinase-like (PK-like) | 167 | 458 | IPR011009 | - | |
Cec04g1381 | 509 | FunFam | Probable serine/threonine-protein kinase At1g01540 | 166 | 261 | - | - | |
Cec04g1381 | 509 | CDD | STKc_IRAK | 192 | 458 | - | - | |
Cec04g1381 | 509 | SMART | serkin_6 | 186 | 457 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec04g1381 | 509 | Gene3D | Phosphorylase Kinase; domain 1 | 167 | 261 | - | - | |
Cec04g1381 | 509 | MobiDBLite | consensus disorder prediction | 480 | 509 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g1381 | Cec-Chr4:33448330 | Cec05g0161 | Cec-Chr5:1373772 | 1.90E-165 | dispersed | |
Cec04g1381 | Cec-Chr4:33448330 | Cec08g1662 | Cec-Chr8:27947811 | 2.70E-199 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71924 | PF00069 | Pkinase | 1.10E-47 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec04g1381 | - | - | - | 0.0 |