Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1389 ATGAACCCTAACCACCCCACATTTCTCTCTTCCCTTCCACTTTTCTGTTCTGTTGTACTGTTTTCTCTCTCCGCTTCTGGATTGGCCTTTCAAATTTCGCCGGACGACTTACTGCTGCCCTCCGACGCCGTTTCTCTTCTTTCCTTCAAGTCCAAAGCCGATTTGAACAACAAGCTTCTTTACACTCTCAATGAGCGCTTTGATTACTGTCAATGGCAGGGCGTGAAGTGTGTACAGGGTCGTGTTGTTCGACTGGTTCTTCAGTCGTTTGGTCTCCGAGGGACATTGGCTCCAAATACAGTGTCTCAGCTCGACCAGCTTCGGATCCTCAGCCTGCATAATAACTCCCTCGAAGGACCCATCCCTGACCTATCTAGACTCTTCAATCTTAAATCTCTGTTCCTTGGCCGAAACTCCTTCGTTGGGTCTTTTCCGCCGTCGATTCTCACTCTTCACCGGCTTCAGACTCTTGATCTTTCCTATAACAACTTTACTGGTCCGCTCCCGACGAGGCTTTCCTCGTTGGACCGACTCATTACTCTTAGGCTTGAATGGAATGGTTTCAATGGAAGTATTCCTCCCTTAAATCAGTCATTCCTTGAGGTCTTCAATGTCACCGGGAACAACCTGACCGGCCAAATTCCAGTTACCCCCACTCTGTCACGTTTTAACACGTCGTCGTTTTTCTGGAACCCAAATCTCTGTGGCGAGATCGTTAACAAGGCATGTCATTCACCCACTCCATTCTTTGAAGCTTCCAATGCCACTCCGCCATCTATCCCTTCCGTCCAAAGTGCACAATCACAGGACGTACTTCTCTCTCCTGTTACTCATGTTAAGCACAAGGAAACCGGTATGATTTTGGGGCTTTCAGTCGGCACTGTAGTTTTAATAGTCGGTGTTTTATGTTTCTATGTAGCTACCAGAACCCAGAGAAGTCAAACTGCGTCGAAGCCGGCAATGCCGCAATTCGAAACCGACACTACTTTTTCCACAGCTCCCGCAATTAACAACCGAGTCGAGGGGAAAGGCGAATTTCAAGCCAAAATGAAAGAAAGTGAAGAAATGCCAAAAGCCCAGAAGAGTGGTAATCTCATATTTTGTGAAGGGGAAGCAGAATTATTCAACTTAGAGCAGTTAATGAAGGCTTCGGCCGAATTGCTCGGTAGAGGCACAATGGGAACTACATACAAAGCAGTGCTCTGCAACCAGCTCATCATAACGGTGAAGCGTCTTGATGCTAATAAGACCGCCGCGACGAGCAGCGAAGTGTTCGACCGACATTTGGGAGCACTGGGTGCGCTTCATCACCCTAATTTGGTACCAGTTAGGGCATACTTCCAGTCGAAGGGAGAGAGATTAGTGGTGTACGATTACCAACCTAATGGCAGTCTTTACAACCTCATTCACGGTTCAAGATCAGCGAGGGCTAAGCCTTTGCATTGGACGTCATGCTTGAAGATTGCAGAAGATTTAGCTCAGGGCATTGCCTATATACATCAAGCCTCGAATTTAATCCATGGCAACTTAAAGTCTTCTAATGTTCTCCTTGGTGCAGAGTTTGAGGCTTGTCTCACGGACTATGGGCTTTCTGCTCTGGCAGAGGCCTATGAAGATTCAGATTGTTCACGCTACCAAGCCCCTGAAACTCGCAAGTCGAGCCGGAACGCGACCCAGAAGAGCGATGTCTATGCCTTCGGCGTCCTTTTGCTGGAACTTTTGACAGGAAGACATCCTGCACACCATCCATTTCTTGAGCCAACTGACATGCCAGAATGGGTGAGAGTAGTTAGGGAAGATGATGGTGGGGATAGTAACCAACTTGGAATGCTTACTGAGGTGGCTAGCATCTGCCGTACTACATCCCCTGAACAGAGGCCGCCCATGTGGCAAGTTTTGAAAATGATACTGGAGATTAAAGAGAGTGTCATGACAGAGGACAGTGAATCTAGGTTTTGGGAAGCTGGTTTTGTGGTGTGTGGACTAGATGTGACAATTGGAACTAGTGGAAGGAGTTCGTTAGTCACAGAATTTGGGGCTGAAGTCAAAAATTGA 2055 47.49 MNPNHPTFLSSLPLFCSVVLFSLSASGLAFQISPDDLLLPSDAVSLLSFKSKADLNNKLLYTLNERFDYCQWQGVKCVQGRVVRLVLQSFGLRGTLAPNTVSQLDQLRILSLHNNSLEGPIPDLSRLFNLKSLFLGRNSFVGSFPPSILTLHRLQTLDLSYNNFTGPLPTRLSSLDRLITLRLEWNGFNGSIPPLNQSFLEVFNVTGNNLTGQIPVTPTLSRFNTSSFFWNPNLCGEIVNKACHSPTPFFEASNATPPSIPSVQSAQSQDVLLSPVTHVKHKETGMILGLSVGTVVLIVGVLCFYVATRTQRSQTASKPAMPQFETDTTFSTAPAINNRVEGKGEFQAKMKESEEMPKAQKSGNLIFCEGEAELFNLEQLMKASAELLGRGTMGTTYKAVLCNQLIITVKRLDANKTAATSSEVFDRHLGALGALHHPNLVPVRAYFQSKGERLVVYDYQPNGSLYNLIHGSRSARAKPLHWTSCLKIAEDLAQGIAYIHQASNLIHGNLKSSNVLLGAEFEACLTDYGLSALAEAYEDSDCSRYQAPETRKSSRNATQKSDVYAFGVLLLELLTGRHPAHHPFLEPTDMPEWVRVVREDDGGDSNQLGMLTEVASICRTTSPEQRPPMWQVLKMILEIKESVMTEDSESRFWEAGFVVCGLDVTIGTSGRSSLVTEFGAEVKN 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 33540120 33544753 - CePI673135_04g013890.1 Cec04g1389 200871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1389 684 ProSiteProfiles Protein kinase domain profile. 382 644 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1389 684 Gene3D Ribonuclease Inhibitor 40 196 IPR032675 -
Cec04g1389 684 Gene3D Ribonuclease Inhibitor 197 246 IPR032675 -
Cec04g1389 684 SUPERFAMILY L domain-like 43 236 - -
Cec04g1389 684 FunFam Probable inactive receptor kinase At5g67200 41 151 - -
Cec04g1389 684 ProSiteProfiles Leucine-rich repeat profile. 106 128 IPR001611 GO:0005515(InterPro)
Cec04g1389 684 Gene3D Transferase(Phosphotransferase) domain 1 461 656 - -
Cec04g1389 684 Pfam Leucine Rich Repeat 153 175 IPR001611 GO:0005515(InterPro)
Cec04g1389 684 Pfam Leucine Rich Repeat 106 123 IPR001611 GO:0005515(InterPro)
Cec04g1389 684 SUPERFAMILY Protein kinase-like (PK-like) 386 641 IPR011009 -
Cec04g1389 684 FunFam Leucine-rich repeat receptor-like protein kinase 153 245 - -
Cec04g1389 684 Gene3D Phosphorylase Kinase; domain 1 346 459 - -
Cec04g1389 684 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 41 644 IPR046959 -
Cec04g1389 684 Pfam Protein tyrosine and serine/threonine kinase 386 634 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1389 Cec-Chr4:33540120 Cec07g0766 Cec-Chr7:15527307 1.80E-105 dispersed
Cec04g1389 Cec-Chr4:33540120 Cec10g1964 Cec-Chr10:34432659 9.20E-70 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71925 PF07714 PK_Tyr_Ser-Thr 3.20E-30 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1389 - - - 0.0