Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1435 ATGATGCAATTCAGCGAGACACCCCCACGGTTGCACCAAACGACCACTACTACTACAAGGATTATTCCTCCTTCATTTCCAGAGATGTCGATGAATAATAAAAACCAAATTACAACAACGGGGAAGTTTCGAAGTAGACGGCCATGGCCTGGTTTATTTCCTTGCTCATCCAAAGCTTTAGGGACTTGCTTGGGAGATGCCAATTGTATGGAACAATTGTTAGTTCATTGTGCCAACGCCATTGAAACCAACGACGCTACTCTCGCCCAACAAATCCTTTGGGTTCTTAACAACATTGCCCCTCCTGATGGCGATTCCAACCAACGCCTCACTTCCGCTTTCCTACGCGCTCTCGTCACACGCGCCACCAACTCCGGCAACTGCAAGATCCTAGCCGCTATCACCACCGCATTCTCCTCCTCACTCACCACACACACCTTCTCCCTTATGGACCTCGCCGCCTTCGTCGACTTAACCCCCTGGCACCGCTTTGGCTTCACCGCCGCCAATGTCGCCATTCTCGACGCCATCGAGGGTTACTCCGTCGTACATGTCGTGGATTTCAGCTTGATGCATTGCATGCAAATCCCTACTTTAATCGACGCCATTGCTACACGATTTGAGGTTCCTCCGGTGTTGAAACTCACGACTGTCGCTGTTGTTGCCGTTAAAGACGCATCGCCTATGCTGGAGCTTTCGTACGACGAATTAGGTGCGAAATTAGTGAACTTCGCCAGGTCTAAAAACGTGACTATGGAATTTAGAGTGGTCCCGTCTTGTCATACAGACGGTTTCGCCAGTTTAATTGAACAAATCCGAATGCAAAATTTAATTTACGGACCTGAAAATAATGAAGCACTCGTTTTTAATTGTCACATGAAGCTTCATTACATCCCTGAAGAAACATTAAACCCAAACCCATCTCCCTATTTCGACATGTCGTCCACTTCAATTCGTTCCATGTTTCTCAAGGCAATCCGTAGTTTAGACCCAACGATTGTGGTTTTAGTAGACGAAGATGCGGATTTCACTTCAAGCAAATTGGTTACACGATTGAGATCGGCGTTTAATTACCTATGGATTCCTTACGACTCCATGGATTCGTTTCTTCCGAGAAGCAGCAAGCAGAGGGAATGGTATGAAGCCGACATTTGTTGGAAGATTGAGAATGTAATTGCACAGGAAGGGATTCAACGAGTTCAAAGATTGGAACCGAAGGGACGGTGGGTTCAACGGATGGTGAACGCCAAATTCCGAGGGGTTCCGTTTGGAGAGGACGCCGTTACGGAGGTGAAGGCGATGCTTGACGAGCATGCAGCGGGATGGGGGTTGAAGAAAGAAGAGGACCACCTGCTGCTCACGTGGAAAGGGCACGACGTCGTTTTCGCTACTGCTTGGGTACCTTGCTAA 1410 48.09 MMQFSETPPRLHQTTTTTTRIIPPSFPEMSMNNKNQITTTGKFRSRRPWPGLFPCSSKALGTCLGDANCMEQLLVHCANAIETNDATLAQQILWVLNNIAPPDGDSNQRLTSAFLRALVTRATNSGNCKILAAITTAFSSSLTTHTFSLMDLAAFVDLTPWHRFGFTAANVAILDAIEGYSVVHVVDFSLMHCMQIPTLIDAIATRFEVPPVLKLTTVAVVAVKDASPMLELSYDELGAKLVNFARSKNVTMEFRVVPSCHTDGFASLIEQIRMQNLIYGPENNEALVFNCHMKLHYIPEETLNPNPSPYFDMSSTSIRSMFLKAIRSLDPTIVVLVDEDADFTSSKLVTRLRSAFNYLWIPYDSMDSFLPRSSKQREWYEADICWKIENVIAQEGIQRVQRLEPKGRWVQRMVNAKFRGVPFGEDAVTEVKAMLDEHAAGWGLKKEEDHLLLTWKGHDVVFATAWVPC 469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 33961740 33963149 - CePI673135_04g014350.1 Cec04g1435 200917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1435 469 Pfam GRAS domain family 70 466 IPR005202 -
Cec04g1435 469 ProSiteProfiles GRAS family profile. 61 467 IPR005202 -
Cec04g1435 469 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 66 466 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0168 Cec-Chr2:1648511 Cec04g1435 Cec-Chr4:33961740 6.90E-95 dispersed
Cec04g1435 Cec-Chr4:33961740 Cec04g1447 Cec-Chr4:34070231 1.10E-42 dispersed
Cec04g1435 Cec-Chr4:33961740 Cec03g0134 Cec-Chr3:1305707 8.10E-33 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29359 PF03514 GRAS 7.10E-92 CL0063 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1435 - - - 0.0