Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1437 ATGAGTTGCAACGGTTGCCGTGTTCTTCGTAAGGGCTGCAGCGAATCCTGTATTCTTCGCCCTTGTTTGCAGTGGATTGACACCGCCGAAGCTCAAGGTCACGCTACTGTCTTCGTCGCTAAGTTCTTCGGCCGCGCCGGCCTCATGTCCTTCATCTCCGCCGTCCCTGAATCTCAGCGACCTTCTTTGTTTCAGTCTTTGTTGTTCGAAGCCTGCGGACGAACCGTCAATCCCGTCAACGGCGCCGTTGGTCTTCTCTGGACTGGCAACTGGCACGTTTGTCAGGCCGCCGTCGACACCGTCCTACGAGGCGGCACTTTGCGGCCAATCAATGATTTCCTTGCTGCTGGATCCCCCAATCTAGCCTCCGACGACAATTCCGAGGCTGAAGTAGGCTGTACCGAGATGTGGAAGATACGAGATTCGTATCCCAATTCTCGATTCTCCAACTCTCGATCCAGGCTCTCACCAAAACGCAAACGATCCGAGGAATCATCTCCCAAACACCAACTGAATGACCTAGATCTCCGCTTGACGCCCACTTTTCCAGCCAAATCAACCCTGCGCGCGGCTACTCCATCCATGAATTCCGAGGAATCCGAGACCACAACGTGCTTCGAGAGCGGCCTTGGGGATAATCATCATCAACATCAATACTATCCAGAAGAAGGAACTACCCAACGGAAACTTCTCAATTTGTTCGTCTAA 708 52.97 MSCNGCRVLRKGCSESCILRPCLQWIDTAEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVDTVLRGGTLRPINDFLAAGSPNLASDDNSEAEVGCTEMWKIRDSYPNSRFSNSRSRLSPKRKRSEESSPKHQLNDLDLRLTPTFPAKSTLRAATPSMNSEESETTTCFESGLGDNHHQHQYYPEEGTTQRKLLNLFV 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 33980341 33981141 - CePI673135_04g014370.1 Cec04g1437 200919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1437 235 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Cec04g1437 235 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Cec04g1437 235 MobiDBLite consensus disorder prediction 156 171 - -
Cec04g1437 235 MobiDBLite consensus disorder prediction 185 211 - -
Cec04g1437 235 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 234 - GO:0010468(PANTHER)
Cec04g1437 235 MobiDBLite consensus disorder prediction 146 223 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1437 Cec-Chr4:33980341 Cec05g2272 Cec-Chr5:34078014 7.30E-51 dispersed
Cec04g1437 Cec-Chr4:33980341 Cec06g1686 Cec-Chr6:30440467 3.10E-41 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29360 PF03195 LOB 4.00E-25 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1437 - - - 0.0