Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1447 ATGGATACCTTGTTTCGGCTTGTCAATCTTCAATCTGAACAATCTTACAATTCCAGTAGAACTAATTCTAGCAGCTCTAGATCTTCTAGACAAAACCAATATCATCATTACCATCAACAGGATCAAGACGAAGAATGCTACAATCTTCTCATGGATGAGGAAGATTTCTCATCGTCTAGTAATTCTAGACAATATTATAATCCATACCATCCTCAACCACCTTCTACGGCTACTCCCACCACCACCGCCTCCACCACTCCAACTCCGATAGATCAATACTCATTCGTTTCCCCTTCACCGGATTTCAACTTCGAATTTTCCGGGAGGTGGGCCCCTGATATTCTCCTTGAAACCGCTAGGGCTATTTCTGACAGGAACAGCGCCCGCGTTCAGCAACTCATGTGGATGCTAAACGAACTTAGCTCTCCCTATGGAGATACGGATCAAAAGCTGGCTGCCTATTTCCTGCAGGCTTTGTTTAGCCGTATGACAGATTCCGGCGACCGTAATTACCGCGCTTTGGCCTCCGCTTCAGAGAAAACATGCTCATTCGAATCAACTAGGAAAGTGATGCTCAAGTTTCAGGAGGTTAGCCCCTGGACCACTTTTGGCCATGTTTCTTGTAATGGCGCATTAATTGAAGCCTTAGAAGGCGAATCAAAGCTACATATAATCGATATCAGCAACACCTATTGCACTCAATGGCCTACTTTGCTTGAAGCTCTTGCAACTCGTACGGACGACACGCCGCACCTCCGCCTCACCACGGTGGTTACCACCAAGCCAAGCGGTGGGACCGGAGTAGCCGCGTCTCAAAAAGTAATGAAAGAAATAGGCACAAGAATGGAAAAGTTCGCTAGGCTTATGGGCGTACCTTTTAAATTCAATGCGCTGTACCATTCCGGTGACCTTTCGGAACTGGACTTAACCAAATTAGACATTAAAGAAGACGAAGCACTTGCCGTTAACTGCGTCGGAGCCTTACGTTCCGTGACGGCGATTAACAACCGTCGAGATTTCTTGATTTCGTCTTTCCGCAGTTTACGGCCACGGATTATCACGGTGATAGAAGAGGAAGCCGATCTCGACGTTGGCGTCGATGGTATTGAATTTATGAGAGGGTTTCAAGAATGTTTGCGGTGGTTTAGGGTTTACTTCGAGACATTGGATGAAAGTTTCTCAAGGACGAGCAACGAACGGTTGATGCTCGAGAGAGCGGCCGGTAGGGCAATCGTGGACCTAGTGGCTTGCTCGGCTGCGGACTCGGTTGAGAGGCGGGAATCGGCGGCGCGGTGGGCTCAGCGGCTGCATGGAAACGGATTCGGTCCGGTGACGTTCAGCGATGAAGTGTGCGACGACGTTAGGGCGCTGTTGAGGAGATACAAGGAAGGATGGGCAATGACACAGAGCTCCGACGTCGCCGGAATATTCTTGACGTGGAAAGAGCAACCGGTGGTGTGGGCCAGTGCATGGAGACCTTGA 1482 49.06 MDTLFRLVNLQSEQSYNSSRTNSSSSRSSRQNQYHHYHQQDQDEECYNLLMDEEDFSSSSNSRQYYNPYHPQPPSTATPTTTASTTPTPIDQYSFVSPSPDFNFEFSGRWAPDILLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTTKPSGGTGVAASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGDLSELDLTKLDIKEDEALAVNCVGALRSVTAINNRRDFLISSFRSLRPRIITVIEEEADLDVGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAADSVERRESAARWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQPVVWASAWRP 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 34070231 34071712 - CePI673135_04g014470.1 Cec04g1447 200929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1447 493 ProSiteProfiles GRAS family profile. 102 492 IPR005202 -
Cec04g1447 493 MobiDBLite consensus disorder prediction 58 92 - -
Cec04g1447 493 MobiDBLite consensus disorder prediction 14 41 - -
Cec04g1447 493 MobiDBLite consensus disorder prediction 14 33 - -
Cec04g1447 493 Pfam GRAS domain family 114 492 IPR005202 -
Cec04g1447 493 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 64 491 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0008356(PANTHER)|GO:0009956(PANTHER)|GO:0043565(PANTHER)|GO:0045930(PANTHER)|GO:0048366(PANTHER)|GO:0055072(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1327 Cec-Chr2:30162565 Cec04g1447 Cec-Chr4:34070231 4.90E-145 dispersed
Cec04g1435 Cec-Chr4:33961740 Cec04g1447 Cec-Chr4:34070231 1.10E-42 dispersed
Cec04g1447 Cec-Chr4:34070231 Cec06g0104 Cec-Chr6:958304 7.20E-117 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29363 PF03514 GRAS 3.80E-105 CL0063 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1447 K27743 - csv:101204711 881.708