Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1495 ATGTGGTTTCTTCTTGTTTTTGTGCTTCTTCAACTTCACTTTTCCCCTTCCTTCTCTGCCTTCCTACCCGAATCCCAAGCCCTTCTCTCTCTCAAATCCTCCATTTCTGACGACCCTCGTTCTTCTCTCTCCTCCTGGAACGCCGTCGCCGCCCACTGTACCTGGTTCGGCGTCACATGCGACGCCCGCCGCCACGTCGTTGCCCTCCACCTCTCTTCCCTTGACCTCGCCGGCACCATTTCCCCTGACCTTGCGTCTCTTCCCTTTCTCACTAATGTTTCCTTCGGCCTCAACAAATTTTCCGGCGGAATCCCACCGGAGATTGCCTCCATTTCTTCTCTCCAGTATCTTAATCTCTCTAGTAACGTCCTCAATGGGTCGATTCCTCGCGAGTTTTCGCAGCTCAAAAACTTACAGGTTCTTGATGTTTATAACAATAACCTGACCGGTGATTTTCCCAGAGTGGTCACTGAAATGACCAACCTCCGCCATGTGCACCTTGGGGGAAATTTCTTCACCGGTCGGATTCCTCCGGAGGTCGGACGGTTGCAGTTCTTGGAGTTTTTGGCGATTCACGGCAATGACCTTGAAGGTCCAATACCGCCGGCGATCGGAAACTTGACGAAGCTTCGGGAACTTTACATTGGTTACTACAACATCTTCGTCGGTGGAATACCGGCGACGATAGGGAATTTGTCGGAGTTAGTTCGGTTGGATGCCGCGAGCTGTGGGTTGACCGGAAAGTTTCCGCCGGAGCTGGGAAAGTTGCAGAAACTCACTGAACTGTACCTTCAACAAAATGCTCTGTCTGGACCTTTGCTGGAGCTAGGAGGATTGAAGAGCATAGAAGAGTTGGATATATCATGCAATATGCTTGTTGGTGAAATACCCATCTCTTTTGCAGAGTTCAAGAACTTGAGGCTGTTGCAACTTTTCGACAACAAGCTCTCCGGAGAGATTCCGGGATTCATGGGCGACCTCCCAAAGCTGGAGATATTGCAATTATGGAACAACAATTTCACAGGTTCGATCCCTCGAAATTTGGGGAAGAACGGAATGCTTCGGACTCTCGACCTTGCTTTCAACCACTTGACAGGTACGATTCCTCCTGAAATCTGCCATGGGAATAAGCTTGACGTTTTGATCGCCATGGGCAATTCCTTGTCTGGTTCCATCCCAGAATCATTGGGGAATTGTATTTCACTTAAGCGTATACTTCTGTGGGGAAACGCTCTTAATGGATCAATTCCAAAGAGGCTTTTGAGTTTGCCAAATCTCACTCAAGTTGATTTGCAAGACAATTTTCTCTCCGGAGAATTTCCCATTACCAATTCAGTCTCGGTTAACCTTCTTCAGATAAGTTTATCTAATAATATGCTCTCTGGATCCTTGCCACCCACCATCGGCAGCCTTGTGGCCGTCCAGAAGCTTCTTCTTGACCGGAATAAGTTTTCTGGTCAAATTCCTTCAAATATTGGGAGATTACAGCAACTATCTCGGATAAATTTCAGCCAGAATAAGTTCTCTGGTACAATTGTGCCAGAGATAAGTGAGTGTAAGCACTTAATATTTCTTGATCTTAGTGGAAATGAGCTTTCTGGTGAAATCCCCGACCATATTACCAACATGAAGTTATTGAATTATATGAATCTCTCAAGAAACCATTTAATTGGGCCCATTCCTGCTTCAATAGTTAACATGCAGAGCTTAACCTCTGTTGACTTTTCATATAACAATCTCTCTGGTTTGGTTCTGGGAACTGGACAATTTGGTTACTTCAATTACACATCATTTTTAGGCAATCCTTACCTCTGTGGTGCATATTTGGGGCCTTGCAAAGATGGGGTTCTTGCTAGCAATCACCAAGAACATATGAAAGGCTCTCTCTCAACTCCTCTCAGGCTCCTGCTAGTTTTTGGTTTAGTTGCACTGACAGTTGCATTGATCTTCAAAGTTCGGTGGTTTAAGAGAGCAAGGGAGTCTAGAGGATGGAGATTAACAGCCTTCCAACGGCTGGGTTTCTCGGTTGATGAGATCTTGGATTGCCTTAAGAAGGAAAATCTTATTGCAAAAGGAGGTTATGGCACAGTATATACAGGAGTGATGCCAAGTGGTGATCAGATCACTCTGAAAAGACTTCCAAAGATGAGCAATGGGTGTTCTCGTGACCACGGATTCAATGCCGAGATTCAAGCTCTTGGGAGGATTCGACACCGTCACATTGTTAGATTATTGGGCCTCTGTTCAAACCATGAAACTAATCTTTTGGTATTTGAGTACATGCCTAATGGGAGTCTCTATGAGGTTCTCCATGGCAAGAAAGGAGGTCACTTGCTTTGGGATACAAGGTACAAGATAGCCATTGGAACTGCGAATGGACTCTGCTATCTTCACCACCATTGCTCGCCGGCCATTGTTCATCGAAATGTGAAATCAAACAACATTATGCTAGACACCAACTTTGAAGCTCAGATTGCCAATTCCGGGCTTGCAAAGTTCTTAGAAGATTCAAGGACATTGGATAAGTCAGCTACCGAGCCAGAGCATGCCGACACACAGAATGCCGATGAGAAGTGGGATGTATATAGCTTCGGTGTCATCCTATTGGAACTCGTTAGCGGTAGAAATCCAGTCGGAGAACTAAGCGACAGTGTCGACATAGTTCAATGGGTTAGAAACATGTCAGTTTCAGAAAGGGAAGAAATACATAAAATCGTCGATCAAAGACTCTCCTCTGTCCCCCTTGACGAAGTGATGCACGTGCTCAATGTTGCCATGCTGTGCACTGAAGAACAGGCTGCAAAGCGTCCCACGATGCGGGAAGTCGTCCGGATCTTAACCGAGCATCAGCAACAATCATTCTCGAAGGAGAATAGAGATACATAA 2886 45.81 MWFLLVFVLLQLHFSPSFSAFLPESQALLSLKSSISDDPRSSLSSWNAVAAHCTWFGVTCDARRHVVALHLSSLDLAGTISPDLASLPFLTNVSFGLNKFSGGIPPEIASISSLQYLNLSSNVLNGSIPREFSQLKNLQVLDVYNNNLTGDFPRVVTEMTNLRHVHLGGNFFTGRIPPEVGRLQFLEFLAIHGNDLEGPIPPAIGNLTKLRELYIGYYNIFVGGIPATIGNLSELVRLDAASCGLTGKFPPELGKLQKLTELYLQQNALSGPLLELGGLKSIEELDISCNMLVGEIPISFAEFKNLRLLQLFDNKLSGEIPGFMGDLPKLEILQLWNNNFTGSIPRNLGKNGMLRTLDLAFNHLTGTIPPEICHGNKLDVLIAMGNSLSGSIPESLGNCISLKRILLWGNALNGSIPKRLLSLPNLTQVDLQDNFLSGEFPITNSVSVNLLQISLSNNMLSGSLPPTIGSLVAVQKLLLDRNKFSGQIPSNIGRLQQLSRINFSQNKFSGTIVPEISECKHLIFLDLSGNELSGEIPDHITNMKLLNYMNLSRNHLIGPIPASIVNMQSLTSVDFSYNNLSGLVLGTGQFGYFNYTSFLGNPYLCGAYLGPCKDGVLASNHQEHMKGSLSTPLRLLLVFGLVALTVALIFKVRWFKRARESRGWRLTAFQRLGFSVDEILDCLKKENLIAKGGYGTVYTGVMPSGDQITLKRLPKMSNGCSRDHGFNAEIQALGRIRHRHIVRLLGLCSNHETNLLVFEYMPNGSLYEVLHGKKGGHLLWDTRYKIAIGTANGLCYLHHHCSPAIVHRNVKSNNIMLDTNFEAQIANSGLAKFLEDSRTLDKSATEPEHADTQNADEKWDVYSFGVILLELVSGRNPVGELSDSVDIVQWVRNMSVSEREEIHKIVDQRLSSVPLDEVMHVLNVAMLCTEEQAAKRPTMREVVRILTEHQQQSFSKENRDT 961
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 34461918 34465024 - CePI673135_04g014950.1 Cec04g1495 200977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1495 961 Gene3D Phosphorylase Kinase; domain 1 655 760 - -
Cec04g1495 961 SMART LRR_sd22_2 207 234 - -
Cec04g1495 961 SMART LRR_sd22_2 135 164 - -
Cec04g1495 961 SMART LRR_sd22_2 256 287 - -
Cec04g1495 961 Pfam Leucine rich repeat 110 148 IPR001611 GO:0005515(InterPro)
Cec04g1495 961 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 444 545 - -
Cec04g1495 961 SUPERFAMILY RNI-like 69 389 - -
Cec04g1495 961 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 761 954 - -
Cec04g1495 961 SMART LRR_typ_2 111 135 IPR003591 -
Cec04g1495 961 SMART LRR_typ_2 471 495 IPR003591 -
Cec04g1495 961 SMART LRR_typ_2 159 183 IPR003591 -
Cec04g1495 961 SMART LRR_typ_2 352 375 IPR003591 -
Cec04g1495 961 SMART LRR_typ_2 256 279 IPR003591 -
Cec04g1495 961 SMART LRR_typ_2 567 590 IPR003591 -
Cec04g1495 961 SMART LRR_typ_2 327 351 IPR003591 -
Cec04g1495 961 Gene3D Ribonuclease Inhibitor 273 339 IPR032675 -
Cec04g1495 961 Pfam Leucine Rich Repeat 449 471 IPR001611 GO:0005515(InterPro)
Cec04g1495 961 Pfam Leucine Rich Repeat 521 543 IPR001611 GO:0005515(InterPro)
Cec04g1495 961 Pfam Leucine Rich Repeat 281 301 IPR001611 GO:0005515(InterPro)
Cec04g1495 961 Pfam Leucine Rich Repeat 354 374 IPR001611 GO:0005515(InterPro)
Cec04g1495 961 Pfam Leucine Rich Repeat 329 350 IPR001611 GO:0005515(InterPro)
Cec04g1495 961 Pfam Leucine Rich Repeat 161 183 IPR001611 GO:0005515(InterPro)
Cec04g1495 961 Gene3D Ribonuclease Inhibitor 177 272 IPR032675 -
Cec04g1495 961 Pfam Leucine rich repeat N-terminal domain 24 61 IPR013210 -
Cec04g1495 961 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 22 177 - -
Cec04g1495 961 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 331 616 - -
Cec04g1495 961 ProSiteProfiles Protein kinase domain profile. 683 954 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1495 961 Pfam Protein tyrosine and serine/threonine kinase 684 946 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1495 961 SUPERFAMILY L domain-like 354 611 - -
Cec04g1495 961 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 652 760 - -
Cec04g1495 961 Gene3D Ribonuclease Inhibitor 340 615 IPR032675 -
Cec04g1495 961 SUPERFAMILY Protein kinase-like (PK-like) 677 946 IPR011009 -
Cec04g1495 961 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 178 273 - -
Cec04g1495 961 Gene3D Ribonuclease Inhibitor 23 176 IPR032675 -
Cec04g1495 961 Gene3D Transferase(Phosphotransferase) domain 1 761 961 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1495 Cec-Chr4:34461918 Cec10g0788 Cec-Chr10:12939079 8.50E-21 dispersed
Cec04g1495 Cec-Chr4:34461918 Cec04g1496 Cec-Chr4:34477962 4.80E-24 tandem
Cec04g1495 Cec-Chr4:34461918 Cec08g1233 Cec-Chr8:24279053 1.10E-52 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71929 PF07714 PK_Tyr_Ser-Thr 1.10E-36 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1495 - - - 0.0