Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1496 ATGCGTCTTCTTCTTCTTCTCCTTTGTCTTCTGCAACTCCACATTCATCACTCTCTCTCTGCTCGTGTTTCTGAGTACCGAGCTCTTCTCTCCCTCAAAACCTCCATTACCGGCGACCCCAAATCCTCACTCTCCTCATGGAACGCCTCCACCAGTCACTGTACTTGGTTTGGGGTCACCTGCGATCTTCGTCGCCATGTCACTGCCTTAGACCTCTCTGGTCTTGGCCTTTCTGGCTCCCTTTCCCCTGATGTTGCCTTTCTAAGATTTCTTACTAATCTTTCTCTTGCTGCCAATGACTTTTCCGGTCCAATCCCCCCGGAGATTTCTTCAGTCTCTTCGCTTCGTCTCCTTAACCTGTCTAACAATGTGTTCGATGGGTCGTTCCCTTCACGGCTTTCGCAGCTCCAGAATCTCCAGGTTCTTGACTTGTATAACAACAATATGACTGGAGATTTCCCCATTGTGGTCACGGAAATGTCGAGCCTCCGCCATTTGCATTTGGGTGGAAATTTCTTTTCCGGACGGATCCCGCCGGAAGTGGGTCGGATGCAGTCTTTGGAGTACTTGGCGGTTTCTGGTAACGAACTTAGCGGTCCGATACCGCCGGAGATCGGAAACCTCACGAACCTTCACGAGCTTTACATTGGCTACTTCAACGCCTACGACGGCGGTATTCCGGCTGAGATTGGGAATTTGTCGAAGTTGGTGCGGTTGGACGCTGCGAACTGTGGACTGTCTGGCCGGATTCCCCCGGAGCTCGGAAAGCTGCAGAATCTCGATACTCTGTTTCTCCAAGTTAATGCTCTATCTGGGCCATTGACGCCGGAGATTGGAGAGTTGAACAGCTTGAAATCTTTGGATTTGTCGAACAATATGCTTGTGGGTGAGATTCCCGCCTCGTTCGCCCAGTTGAAGAACTTGACGCTGTTGAATCTGTTTAGAAACAAGCTACATGGGGCGATTCCTTCCTTTATTGGCGACTTGCCGAAGCTGGAGGTGTTGCAGTTATGGGAGAATAATTTCACGGAAGCTATTCCACAGAACCTGGGGAAGAACGGAATGCTTCAGATATTGGATCTTTCTTCCAATAAGCTGACTGGAACGCTTCCTCCCGATATGTGCTACGGTAATCGGCTTCAAACTCTGATCGCATTGAGCAATTTCTTGTTTGGTCCAATCCCAGAGTCGCTAGGCAAATGCGTTTCGCTGAATCGCATTCGTATGGGGGAAAATTTTCTCAATGGATCCATTCCAAAGGGGCTTCTGAGTCTGCCAAAGCTCTCTCAGGTGGAGTTACAGGACAATTTCCTCTCCGGCGAGTTCCCAATAACCGATTCGATCTCATTGAATCTCGGCCAGATTAGTCTCTCGAACAACCGACTCACCGGGTCAATTCCGCCGACAATCGGCAACTTCTCCGGCGTCCAGAAACTACTACTTGACGGAAACAAGTTCTCCGGTCAAATCCCACCTGAGATTGGACGGTTACAGCAACTATCGAAGATAGATTTCAGTAACAATAAGCTGTCGGGTCCAATCGCGCCGGAGGTTAGCCAATGCAAGCTTCTAACCTTCGTCGATCTCAGCCGAAACGAGCTCTCGGGAGAAATTCCAAACGAGATTACCAGTATGAGGATATTGAATTACCTGAATCTCTCAAAAAACCATTTAGTCGGCGGAATCCCTGCTTCCATATCCAGCATGCAGAGTTTAACCTCCGTTGATTTCTCATACAACAACCTCTCCGGTTTAGTTCCGGGAACTGGGCAATTCAGTTACTTCAATTACACATCGTTTTTGGGAAATCCTGATCTCTGCGGCCCATATTTGGGACCATGCAAAGATGGGGTTGCCAATAGCAATTACCAACAACATGTAAAGGGCCCCCTCTCTGCTTCTCTCAAGCTCCTCCTTGTAATTGGTCTGCTTCTTTGCTCCATTGCATTTGCAGTTGCTGCCATCATCAAAGCTCGATCGTTAAAGAGAGCCAGCGAGTCTCGAGCTTGGAAATTAACATCCTTCCAACGCCTAGATTTCACAGTTGATGATGTTCTTGATTGCTTGAAAGAGGATAACATTATTGGAAAAGGAGGGGCCGGAATTGTGTATAAAGGGGCCATGCCAAGTGGTGACCAGGTCGCCGTCAAAAGGCTGCCGGCGATGAGCCGTGGATCGTCCCACGACCATGGATTCAACGCTGAGATACAAACTCTTGGAAGGATTCGTCATCGACATATTGTAAGACTATTGGGATTTTGTTCAAACCATGAGACTAATCTTTTGATTTATGAGTTTATGCCTAATGGAAGTTTGGGGGAAGTTCTTCATGGCAAAAAAGGGGGTCACCTTCAGTGGGATACAAGGTATAAGATTGCTATTGAAGCTGCTAAAGGGCTTTGCTATCTCCACCATGATTGCTCGCCACTCATTGTTCATCGAGATGTTAAATCAAACAACATACTTCTTGACACTAATTTTGAAGCTCATGTTGCTGATTTTGGCCTTGCCAAGTTCTTACAGGATTCCGGCACTTCTGAGTGCATGTCTGCGATTGCTGGTTCTTATGGATATATTGCCCCAGAATACGCCTACACGCTAAAAGTTGACGAGAAGAGTGACGTATATAGCTTTGGAGTTGTCCTGTTGGAGCTTGTTAGTGGAAGAAAACCGGTAGGAGAATTCGGGGACGGTGTCGACATAGTTCAATGGGTTAGAAAAATGACAGACTCAAACAAGGAAGAGGCAGTGAAAATCCTTGATCCAAGGCTGTCCTCCGTGCCTCTCCACGAAGTGATGCACGTCTTCTACGTCGCAATGCTGTGCGTCGAGGAACAGGCGGTCGAGCGTCCGACAATGCGGGAAGTGATCCAAATCCTATCAGAGATTCCTCAGCCACCATGTTCAAAACAGGGAGGAGATTCAACACTACCCAACTCCTCACCACCCCCACCACCACCACCACCACCACCAGCTGCCGATTTAGACCTTCCAACAACAGGAGCCAAGAACAAAAAAGACCATCAGCAGCCGCAGCAGCCGCCACCAGATCTTCTTAGCATTTGA 3066 48.17 MRLLLLLLCLLQLHIHHSLSARVSEYRALLSLKTSITGDPKSSLSSWNASTSHCTWFGVTCDLRRHVTALDLSGLGLSGSLSPDVAFLRFLTNLSLAANDFSGPIPPEISSVSSLRLLNLSNNVFDGSFPSRLSQLQNLQVLDLYNNNMTGDFPIVVTEMSSLRHLHLGGNFFSGRIPPEVGRMQSLEYLAVSGNELSGPIPPEIGNLTNLHELYIGYFNAYDGGIPAEIGNLSKLVRLDAANCGLSGRIPPELGKLQNLDTLFLQVNALSGPLTPEIGELNSLKSLDLSNNMLVGEIPASFAQLKNLTLLNLFRNKLHGAIPSFIGDLPKLEVLQLWENNFTEAIPQNLGKNGMLQILDLSSNKLTGTLPPDMCYGNRLQTLIALSNFLFGPIPESLGKCVSLNRIRMGENFLNGSIPKGLLSLPKLSQVELQDNFLSGEFPITDSISLNLGQISLSNNRLTGSIPPTIGNFSGVQKLLLDGNKFSGQIPPEIGRLQQLSKIDFSNNKLSGPIAPEVSQCKLLTFVDLSRNELSGEIPNEITSMRILNYLNLSKNHLVGGIPASISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGPCKDGVANSNYQQHVKGPLSASLKLLLVIGLLLCSIAFAVAAIIKARSLKRASESRAWKLTSFQRLDFTVDDVLDCLKEDNIIGKGGAGIVYKGAMPSGDQVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLIYEFMPNGSLGEVLHGKKGGHLQWDTRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLDTNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVSGRKPVGEFGDGVDIVQWVRKMTDSNKEEAVKILDPRLSSVPLHEVMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPCSKQGGDSTLPNSSPPPPPPPPPPAADLDLPTTGAKNKKDHQQPQQPPPDLLSI 1021
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 34477962 34481376 - CePI673135_04g014960.1 Cec04g1496 200978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1496 1021 ProSiteProfiles Protein kinase domain profile. 689 963 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1496 1021 SUPERFAMILY L domain-like 296 614 - -
Cec04g1496 1021 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 767 976 - -
Cec04g1496 1021 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 82 325 - -
Cec04g1496 1021 Gene3D Transferase(Phosphotransferase) domain 1 767 971 - -
Cec04g1496 1021 MobiDBLite consensus disorder prediction 964 1021 - -
Cec04g1496 1021 Pfam Leucine Rich Repeat 186 208 IPR001611 GO:0005515(InterPro)
Cec04g1496 1021 Pfam Leucine Rich Repeat 283 305 IPR001611 GO:0005515(InterPro)
Cec04g1496 1021 Pfam Leucine Rich Repeat 477 497 IPR001611 GO:0005515(InterPro)
Cec04g1496 1021 Pfam Leucine Rich Repeat 356 375 IPR001611 GO:0005515(InterPro)
Cec04g1496 1021 Pfam Leucine Rich Repeat 548 569 IPR001611 GO:0005515(InterPro)
Cec04g1496 1021 Pfam Leucine Rich Repeat 235 257 IPR001611 GO:0005515(InterPro)
Cec04g1496 1021 Pfam Leucine Rich Repeat 524 545 IPR001611 GO:0005515(InterPro)
Cec04g1496 1021 Pfam Leucine Rich Repeat 451 473 IPR001611 GO:0005515(InterPro)
Cec04g1496 1021 SUPERFAMILY RNI-like 70 391 - -
Cec04g1496 1021 SUPERFAMILY Protein kinase-like (PK-like) 681 960 IPR011009 -
Cec04g1496 1021 Gene3D Ribonuclease Inhibitor 237 353 IPR032675 -
Cec04g1496 1021 Gene3D Ribonuclease Inhibitor 178 234 IPR032675 -
Cec04g1496 1021 Gene3D Phosphorylase Kinase; domain 1 654 766 - -
Cec04g1496 1021 MobiDBLite consensus disorder prediction 978 995 - -
Cec04g1496 1021 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Cec04g1496 1021 Gene3D Ribonuclease Inhibitor 22 177 IPR032675 -
Cec04g1496 1021 SMART LRR_typ_2 112 136 IPR003591 -
Cec04g1496 1021 SMART LRR_typ_2 329 353 IPR003591 -
Cec04g1496 1021 SMART LRR_typ_2 569 592 IPR003591 -
Cec04g1496 1021 SMART LRR_typ_2 354 377 IPR003591 -
Cec04g1496 1021 SMART LRR_typ_2 160 184 IPR003591 -
Cec04g1496 1021 SMART LRR_typ_2 497 521 IPR003591 -
Cec04g1496 1021 SMART LRR_typ_2 281 304 IPR003591 -
Cec04g1496 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1496 1021 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 963 IPR050647 -
Cec04g1496 1021 SMART serkin_6 689 937 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1496 1021 MobiDBLite consensus disorder prediction 1004 1021 - -
Cec04g1496 1021 Pfam Leucine rich repeat 114 171 IPR001611 GO:0005515(InterPro)
Cec04g1496 1021 Gene3D Ribonuclease Inhibitor 354 618 IPR032675 -
Cec04g1496 1021 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 658 766 - -
Cec04g1496 1021 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 333 618 - -
Cec04g1496 1021 Pfam Protein kinase domain 691 958 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1496 Cec-Chr4:34477962 Cec10g0788 Cec-Chr10:12939079 4.50E-20 dispersed
Cec04g1495 Cec-Chr4:34461918 Cec04g1496 Cec-Chr4:34477962 4.80E-24 tandem
Cec04g2314 Cec-Chr4:40710818 Cec04g1496 Cec-Chr4:34477962 3.20E-134 transposed
Cec05g2000 Cec-Chr5:31995664 Cec04g1496 Cec-Chr4:34477962 1.40E-132 transposed
Cec10g0685 Cec-Chr10:9530650 Cec04g1496 Cec-Chr4:34477962 6.40E-141 transposed
Cec11g1548 Cec-Chr11:29777168 Cec04g1496 Cec-Chr4:34477962 6.10E-72 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71930 PF07714 PK_Tyr_Ser-Thr 4.20E-46 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1496 - - - 0.0