Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1521 ATGGGGAAATCACCGGCGAAAGAGCATCCTAAGAAGGCTTTTGGATGGGCTGCCTCAGATACCTCCGGCCTTCTTTCTCCATTTCATTTCTCCAGAAGAGAAACAGGGGAAAATGATGTAGCTTTTAAAGTTCTTTACTGTGGAATTTGCCATTCTGACCTTCACATGGTGAAGAATGAGTGGGGAACTACCATTTACCCTATCGTTCCTGGTCATGAAATCGTGGGCGAGGTAACAGAGGTTGGAAGCAAAGTAAAGAACTTCAAGGTCGGAGACAAAGTTGGCGTAGGATGTATGGTTCAATCCTGCCGCTCCTGTGATAACTGTTCCAACGACCTCGAGAACTATTGCCCCAAAATGATCCTCACCTACTCCGCCAACAACACTGACGGGACCATAACCTACGGAGGATACTCCGACTGTATGGTCGCTGACGAGCATTTCATTGTTCGCATTCCCGATGGCATCCCTCTACACGCTGGGGCTCCCCTGCTGTGCGCTGGTATCACAGTTTACAGCCCCTTGAGATACTTTGGACTTGACAAGCCTGGAATGCACATCGGCGTGGTTGGCCTCGGTGGGCTTGGCCACGTTGCCGTCAAATTTGCTAAGGCCTTCGGCGCTAAGGTTACTGTGATTAGTACCTCGCCTAATAAGAAGCAGGAGGCTATTGAACATCTTGGGGCTGATTCATTCTTGGTCAGCCGTGATCAAGAGCAATTGCAGGCTGCTAGGGGGACTTTGGATGGTATCATAGACACAGTCTCTGCTGCACATCCCCTTCTTCCTCTGCTGTCGCTTGTAAAAACACATGGAAAATTTGTTATGGTTGGAGCACCAGAGAAGCCACTTGAGCTCCCGGCCTTTGCTCTTATTGGGGGTAGGAAAACAATGGCCGGTAGTTGCATTGGAGGGATGAAGGAAACACAAGAGATGATTGATTTTGCTGCCAAACACAACATTACGGCAGATGTCGAGGTGATTCCAATGGCAGACGTCAACAAGGCAATGGAACGAATGCTGAAACAGGATGTCAAGTATCGGTTCGTCATCGACATTGCCAACTCATTGAAGCCGTAG 1080 48.98 MGKSPAKEHPKKAFGWAASDTSGLLSPFHFSRRETGENDVAFKVLYCGICHSDLHMVKNEWGTTIYPIVPGHEIVGEVTEVGSKVKNFKVGDKVGVGCMVQSCRSCDNCSNDLENYCPKMILTYSANNTDGTITYGGYSDCMVADEHFIVRIPDGIPLHAGAPLLCAGITVYSPLRYFGLDKPGMHIGVVGLGGLGHVAVKFAKAFGAKVTVISTSPNKKQEAIEHLGADSFLVSRDQEQLQAARGTLDGIIDTVSAAHPLLPLLSLVKTHGKFVMVGAPEKPLELPAFALIGGRKTMAGSCIGGMKETQEMIDFAAKHNITADVEVIPMADVNKAMERMLKQDVKYRFVIDIANSLKP 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 34726967 34729337 - CePI673135_04g015210.1 Cec04g1521 201003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1521 359 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491(InterPro)
Cec04g1521 359 Gene3D - 167 323 - -
Cec04g1521 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Cec04g1521 359 FunFam Uncharacterized protein 16 166 - -
Cec04g1521 359 Pfam Alcohol dehydrogenase GroES-like domain 36 154 IPR013154 -
Cec04g1521 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 321 IPR036291 -
Cec04g1521 359 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Cec04g1521 359 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Cec04g1521 359 SUPERFAMILY GroES-like 22 184 IPR011032 -
Cec04g1521 359 CDD CAD1 14 352 IPR047109 GO:0016616(InterPro)
Cec04g1521 359 PANTHER ALDEHYDE REDUCTASE 6 356 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Cec04g1521 359 Gene3D - 16 353 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0084 Cec-Chr2:821300 Cec04g1521 Cec-Chr4:34726967 6.60E-144 dispersed
Cec02g0085 Cec-Chr2:836459 Cec04g1521 Cec-Chr4:34726967 5.80E-148 dispersed
Cec02g0675 Cec-Chr2:6962907 Cec04g1521 Cec-Chr4:34726967 1.10E-103 dispersed
Cec04g0416 Cec-Chr4:15992277 Cec04g1521 Cec-Chr4:34726967 2.00E-25 dispersed
Cec04g1521 Cec-Chr4:34726967 Cec05g1719 Cec-Chr5:28724398 9.30E-122 dispersed
Cec04g1521 Cec-Chr4:34726967 Cec05g1205 Cec-Chr5:11082250 7.60E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1521 K23232 - csv:101222715 679.478