Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1524 ATGATTGCCTTCAACTCGTTTTCAACACGCGACCCCACCAATCGCGTGAGACTGGTTCCCGGTGCACATATGAGCTTCTTTGTCTCCTCAGGTTTAATTGTTACTATCTGTAATATGGGAACTCAAGGTCAAGCAGGATTAGTAGCACAAAAGAAGATGCAACCTCCTCAACCTGGAAGATTTGAAGATCGTGAAGATCTCATTAAATATGTTCGTGATTTTGGTGCTGATCAAGGATATGTGGTAACGATTAAGAAGTCTAGGAAAGATAGAAGGGTCATCCTTGGTTGTGATAGAGGAGGCGTGTACCGTAATAGGCGTAAGATTGATGAGAATCCACGCAAAAGGAAAGCTAGCTCGCGCCTGATAAATTGCCCGTTTGAAGCAATTGGCAAGAAGGAAGATGATGCCTGGATGCTTACCATTAAAAATGGGGACCATAACCATGAGCCCTTAAAAGACATGTCAGAGCATCCTTACAGTCGCCGTTTTACTGAGGATGAAGTAAAGCAAATAAAACTGATGACTGAAGCTGGTATAAAACCACGTCAAGTGCTTAAAGCTCTCAAACAACACAATCCAGATCTGCAGTCAACACCAAGGCATTTGTATAACCTCAAAGCCAAAATTCGCCAAGGAAATCTATCAGAAAAAAATTTCAAGTCATGGAGACCTAATATTTCAGTTCCTACAAATAGTAGTCATACTGTCATTGGGGATTCAGTCAAGCAAAATCATCAGCTGAAGGTTCCTAATTTAATTGGAGGGGAATTTTTGGATTCGCACAACTGTCCAGTGGTTGATGTTATTAATCCAGCAACACAAGAAGTTGTTTCTCATGTCCCTTTAACAACCTACGAAGAGTTTAAGGCTGCAGTTAATGCAGCCAAACAAGCTTTTCCCTCATGGAGAAACACACCAATTTCTACTCGTCAATGTGTTATGTTCAAGTTTCAGGAGCTCATCCTCAGGGACATGGATAAGCTTGTGACGAATATTGTCACAGAACAGGGAAAGACATTAAGGGATGCTCAAGATGATATCATCTGTGGTTTAGAGGTGGTTAAACATGCTTGTGGATTGGCCACTATGCAAATGGGGGAGTTCATCCCTAATGCAACTGATGGAATTGATTCGTACTGCATCCGAGAACCAATAGGTGTGTGTGCTGGGATATGCTCTTTAAACCATCCAGCAACAGTTTCCTTATGGATGTTTCCGATTGCAGTTACTTGTGGCAATACATTTGTTCTTAAGCCATGTGAAACACACCCGGGGGCTTCAATGTTGCTTGCTGCATTAGCAGTTGAGGCTGGCTTGCCTGATGGTGTTCTAAATATTGTTCATGGAACCCATGATATCATCAACTATATATGTGATGATGAAGACATAAAAGCCATATCTTTTTCCAGTTCAAGTTCAGTTGGAAAGAACATATATGCTAGGGCTGCTACTACAGGAAAGCAAGTTCAGTCCCACTTTGGAGGCAAGAGTCATGCAATTATTATGCCTGATGCTAACATGGAAGCTACTTTAAGTGCTCTGGTTGATGCTGGATTTGGTACTGCTGGACGGACATGTTTGGCTATCGACATCGTTGTCTCCGTTGGGTGTTCAATTCTGTGGGAAGAAAAACTTGTGGAATGTGCCAAAGCACTTAAAGTGAATGTGGGGACAGATCCCAAAGCTGACCTTGGTCCTGTAATTACCAAACAGGTGAAAGATCGCTTTTGTAAATTAGTTCAAAGTGGCATTGAAGATGGTGCCAGACTTTTGCTTGACGGTAGAGATATTGTGGTCCCAGGATATGAAAATGGAAATTTTGTTGGTCCAACCATTTTATCTGATGTAACAACTGAAATGGAGTGCTACAAGGAAGAATTTTTTGGACCAGTTCTCCTTTGTATGCAGGCTGACAACCTAGAGGAGGCTATATCCATTGTAAACAGAAACAAGAACCGAAATGGAGCTTCCATATTCACAACTTCTGGCATTTATGCGAGGAAGTTTCAGAGTGACGTGGAAGTGGGAATGGTTGGCACCAATGTTGCTGTTACAGTTCCGTTGCCATCTTCCTTTAATGATAAGGCAGGACTGGAGTTTTACACCCAATTGAAAAGAGTGGCTCAACAGTGGAAGAACTCACCAAGTATTGGAGTGTCAATGGCGCTGCCTTCACCATCTGAGAGACATTTGAGATCCCGTGCTGTACCTTCCATGTTGGTTTCAACATCTGAGAAAGATTCACCTGGGATGCAGCACAAAAGTTTACCCCCATTGCCTTCCACATCTGAGAGGGATTCAGCTGGTGTCGCTGTACTGCTGCCGAACTCTCGAATATCTCAGACAGGTTTAACCAATGAAAGAGCCACCTCCTCTCCACCGACTCCTGATAGGGATTTGCACGGTCAGGGACTTTCCCTGATTTCTACCTTGTCATCAGAGGGGGACGTATCCAACCAAGATTTGTCTCCTGCTATGCTTTCAGCAGGCGATAGAGATTTACCTGGTCAAGCTGTGTCAGTGGCAACATCCCGATCATCTGAGCGACTGTATATACCTCAGAAATCTCATTGGAACGCAACCCTGAGGGCTGATTCAATTCCATCCAGTTCTGAGAGGATCCATGCGCCCTCATCGCACACAAACAACATCAAAGGGCAGGCATCTCGAACAACTCATCCGGCTTTGGTCTTAGCTGCAGAGGGGTTATATGTGCCATCATCTCATGACAGTATTTGTCTCATTAACCATAGAAATGATAGTACGGTTCCATCTCGAAGAACTGACAGCATGTGTCAATCATCAGAACGGGTATACATGCTAGCAACGTCCCATCTGAACGACACTATGAGTCGAACATTGCAGAGAACTGATACCTCCTTGTTTTCTTCTTCAGAGAGGCATTATGTGCCTCCCTCTTCTGATGGAAATGACCATATCAGCTTAGCTTCTCATACCGACGTTGCATTGCAATCAACCTCAGATAGAATGTACTTGTCTAGCTTGTCCAAGAGGAATGATAATATGGCTTCCGCTGCTTCTCAACAAGCCGAATCTTTAACATCCACTTCAGAGAGAATGTATATACCTCCATTAGTTCATAGAAATGCAGGTATGGCACCAAAATCGGAATGGCTATGCATTCCCGCACCTGCTGGATCTCAGAGAATGTACCCACAAGGTCCAATAGTTTCAGCAGATGAATTTCAAAGCCAAGGAGCATCATTAACATTGCCTGCATCACAAAGAATGTAA 3258 43.37 MIAFNSFSTRDPTNRVRLVPGAHMSFFVSSGLIVTICNMGTQGQAGLVAQKKMQPPQPGRFEDREDLIKYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDENPRKRKASSRLINCPFEAIGKKEDDAWMLTIKNGDHNHEPLKDMSEHPYSRRFTEDEVKQIKLMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLSEKNFKSWRPNISVPTNSSHTVIGDSVKQNHQLKVPNLIGGEFLDSHNCPVVDVINPATQEVVSHVPLTTYEEFKAAVNAAKQAFPSWRNTPISTRQCVMFKFQELILRDMDKLVTNIVTEQGKTLRDAQDDIICGLEVVKHACGLATMQMGEFIPNATDGIDSYCIREPIGVCAGICSLNHPATVSLWMFPIAVTCGNTFVLKPCETHPGASMLLAALAVEAGLPDGVLNIVHGTHDIINYICDDEDIKAISFSSSSSVGKNIYARAATTGKQVQSHFGGKSHAIIMPDANMEATLSALVDAGFGTAGRTCLAIDIVVSVGCSILWEEKLVECAKALKVNVGTDPKADLGPVITKQVKDRFCKLVQSGIEDGARLLLDGRDIVVPGYENGNFVGPTILSDVTTEMECYKEEFFGPVLLCMQADNLEEAISIVNRNKNRNGASIFTTSGIYARKFQSDVEVGMVGTNVAVTVPLPSSFNDKAGLEFYTQLKRVAQQWKNSPSIGVSMALPSPSERHLRSRAVPSMLVSTSEKDSPGMQHKSLPPLPSTSERDSAGVAVLLPNSRISQTGLTNERATSSPPTPDRDLHGQGLSLISTLSSEGDVSNQDLSPAMLSAGDRDLPGQAVSVATSRSSERLYIPQKSHWNATLRADSIPSSSERIHAPSSHTNNIKGQASRTTHPALVLAAEGLYVPSSHDSICLINHRNDSTVPSRRTDSMCQSSERVYMLATSHLNDTMSRTLQRTDTSLFSSSERHYVPPSSDGNDHISLASHTDVALQSTSDRMYLSSLSKRNDNMASAASQQAESLTSTSERMYIPPLVHRNAGMAPKSEWLCIPAPAGSQRMYPQGPIVSADEFQSQGASLTLPASQRM 1085
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 34745256 34756738 + CePI673135_04g015240.1 Cec04g1524 201006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1524 1085 CDD ALDH_F6_MMSDH 250 712 IPR010061 GO:0004491(InterPro)
Cec04g1524 1085 Pfam Aldehyde dehydrogenase family 261 689 IPR015590 GO:0016491(InterPro)
Cec04g1524 1085 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 252 712 IPR010061 GO:0004491(InterPro)
Cec04g1524 1085 SUPERFAMILY ALDH-like 243 714 IPR016161 GO:0016491(InterPro)
Cec04g1524 1085 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 269 494 IPR016162 GO:0016491(InterPro)
Cec04g1524 1085 MobiDBLite consensus disorder prediction 740 804 - -
Cec04g1524 1085 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 254 501 - -
Cec04g1524 1085 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 495 689 IPR016163 GO:0016620(InterPro)
Cec04g1524 1085 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 495 694 - -
Cec04g1524 1085 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 53 726 IPR010061 GO:0004491(PANTHER)|GO:0004491(InterPro)|GO:0005739(PANTHER)|GO:0006210(PANTHER)|GO:0006574(PANTHER)|GO:0018478(PANTHER)
Cec04g1524 1085 MobiDBLite consensus disorder prediction 740 763 - -
Cec04g1524 1085 MobiDBLite consensus disorder prediction 775 798 - -
Cec04g1524 1085 MobiDBLite consensus disorder prediction 871 890 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1524 Cec-Chr4:34745256 Cec09g1759 Cec-Chr9:33075643 1.40E-192 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1524 K00140 - csv:101207178 1893.63