Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1622 ATGACGGGCAGAGGGTCATCGGGAAGGACGCCGACGTGGAAAGAAAGGGAGAACAATAAGAGGAGAGAGAGGCGACGGAGAGCCATTGCTGCTAAGATCTACACTGGTCTCAGAGCTCAGGGGAACTATAAGCTTCCTAAGCACTGTGACAACAACGAGGTCTTAAAGGCACTCTGTAATGAAGCTGGTTGGGTGGTTGAGGAAGATGGCACCACCTATCGCAAGGGATGCAAGCCACCTCCGATTGATATTGGCACTTCTGCAAATATGAGTGCCTGTTCTTCTCTTCAACCAAGCCCACAATCTTCATGCTTCCCCAGTCCTGTACCATCCTACCATGCCAGTCCTTCTTCATCCTCTTTTCCAAGCCCAACTCGATTCGACGGGAATCCATCTTCTTACCTTCTGCCATTCCTTCAAAATATATCCTCTATACCTGCTAATCTCCCTCCTCTCAGAATATCGAACAGTGCACCTGTCACACCACCTCTTTCTTCCCCGACGTCAAGGGGTTCGAAGCGAAAGCCAGACTGGGAGTCCATTCCAAATAGCTATGTAACCTCTTTCCGCCATCCCCTCTTTGCTGTCTCTGCTCCATCAAGTCCTACAAGATGCCACCATCTTACACCCGCAACAATTCCAGAATGTGATGAGTCTGATGCTTCAACTGTAGACTCTGGCCGCTGGGTCAGTTTCCAGACTGTGGCACCTTCTGTTGCTCCTCCTTCCCCTACATTTAATCTGATGAAACCAGTTAGTCAGCAAAACTCTCTCCAAGATGCAGTTGACAGACATGGAGCAATGGGCTGGGGTGCTACATCTGATAGGGGACGAGGCTCTGAGTTTGAATTTGAGAAATTTGAGAGTGGCACAGTGAAGCCATGGGAGGGTGAGAGAATTCATGAAGTTGGGGTGGATGATTTGGAGCTTACTCTTGGGGGTGGGAAGGCCCGTGGTTAA 960 49.69 MTGRGSSGRTPTWKERENNKRRERRRRAIAAKIYTGLRAQGNYKLPKHCDNNEVLKALCNEAGWVVEEDGTTYRKGCKPPPIDIGTSANMSACSSLQPSPQSSCFPSPVPSYHASPSSSSFPSPTRFDGNPSSYLLPFLQNISSIPANLPPLRISNSAPVTPPLSSPTSRGSKRKPDWESIPNSYVTSFRHPLFAVSAPSSPTRCHHLTPATIPECDESDASTVDSGRWVSFQTVAPSVAPPSPTFNLMKPVSQQNSLQDAVDRHGAMGWGATSDRGRGSEFEFEKFESGTVKPWEGERIHEVGVDDLELTLGGGKARG 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 35562619 35564132 + CePI673135_04g016220.1 Cec04g1622 201104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1622 319 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 6 318 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
Cec04g1622 319 MobiDBLite consensus disorder prediction 1 25 - -
Cec04g1622 319 Pfam BES1/BZR1 plant transcription factor, N-terminal 6 129 IPR008540 -
Cec04g1622 319 MobiDBLite consensus disorder prediction 155 179 - -
Cec04g1622 319 MobiDBLite consensus disorder prediction 155 171 - -
Cec04g1622 319 MobiDBLite consensus disorder prediction 10 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0673 Cec-Chr3:7252565 Cec04g1622 Cec-Chr4:35562619 6.20E-56 transposed
Cec07g1113 Cec-Chr7:26331372 Cec04g1622 Cec-Chr4:35562619 4.50E-51 transposed
Cec04g1622 Cec-Chr4:35562619 Cec08g1575 Cec-Chr8:27316678 2.50E-86 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29386 PF05687 BES1_N 1.70E-64 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1622 K14503 - csv:101216171 579.326