Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1627 ATGGCAGATATTCTTAGCGCTTTGAGAGTTCTAATGGCGTCCCATACTCCTCCTCTTGACGCCTTGGTTGTTCCTTCTGAGGACTATCACCAGAGTGAATATGTATCTGCGAGAGATAAACGACGTGAATTTGTGTCAGGTTTCACCGGAAGTGCTGGTCTGGCCCTTGTAACTCAGAGAGAAGCATTACTGTGGACCGATGGGCGGTATTTCCTGCAGGCAATTCAACAGCTTAGTGATCAGTGGAAACTTATGCGAATGGGAGAGGATCCTTCTGTAGATCTCTGGATGGCTGAGAATCTTCCAGCAGATGCAGCTGTTGGAGTGGATCCTTGGTGTGTGTCAGTGGACACAGCACAAAAATGGATTCACGCATTTTCCAAGAAGCAGCAGAAGCTGGTTCAAACCACCACGAACTTAGTTGATGAAGTTTGGAAGAACCGACCACCACCAGAAATAAATCCTGTTATGATACACCCACTGGAATATACTGGCCGCTCTGTTGAAGATAAGTTGAAGACTTTGAGAACAAGGCTTTCACAAGAGAAAGCTCATGGTTTAATTGTGACTGGACTTGATGAAGTAGCTTGGTTGTACAACATCCGTGGGAGTGATGTGTCATACTGTCAAGTTGTACATGCATTTGCAATAGTGACACTCAATTCAGCGTTCTTTTATGTGGACAAGAGGAAGGTGTCTGATGAGGTGCGCTTGTACATGGAGCAAAATGGAATTGAAGTTCGGGATTATAGTGCAGTAATAACAGATGTGTCCCTACTTGCATCTAATCAACTTAACTTGTCATCTTTTGTGAAAGGACCTGAAGTTAGGGCTAATATGGAAGTAGAACTCAGTTCGATTGACATAGCAGGTTCTAATGGAACTAAAGTAGAAAGCCAGAGTTCTGGCCTCATATGGCTTGATCCTGCCCAATGCTGCTATGTTTTGTATTCTAAACTGAACTCTGATAAGGTTCTCCTGCAACAGTCGCCATTGGCCCTTGCGAAAGCGCTAAAGAACTCTGTTGAGTTGGACGGACTAAAGAAGGCACACATTCGGGATGGTGCAGCTGTTGTACAATATCTTGTGTGGTTGGACAAGCAGCTGCAAGACATTTATGGTGCTGCTGGTTACTTTCGGGAAGGGGATGGAGTGAGGAAGCCCAAACCGTCGGACTCAAAGAAACTAACAGAAGTTAGTGTAAGCGATAAGCTTGAGGCTTTCCGAGCATCAAAGGAGCTAGTCCTCCCACATCCTGCGTATTCATATCTTTCAGAGGTTCTGATATCTGTTGGCCTTTTTGAGAATCTTCATCTGCAGCATTTTAGAGGCCTAAGTTTCCCTACTATTTCATCTGTTGGTTCAAATGCTGCAATTATTCATTATGGACCACAAGCAGAGACATGTGCTGAGTTGGATCCTGAAAGCATCTATCTTTTTGACTCGGGAGCTCAGTATTTGGACGGAACAACCGATATCACGCGGACAGTCCATTTTGGATTACCTTCAGCACATGAGAAAGCTTGTTATACTGCAGTTCTCAAAGGCCATATTGCTTTGGGAAATGCAAGATTTCCAAATGGCACGAATGGCCACTCATTGGACATTCTTGCTCGAGTTCCCTTGTGGAAGGATGGTCTGGATTATCGACATGGCACTGGCCATGGAATTGGTTCTTTCCTTAATGTTCATGAAGGACCCCATTTAATTAGTTTCAGACCACAGGCTCGAAATGTTCCTCTTCAAGCTTCAATGACTGTTACGGATGAGCCTGGCTATTACGAGGATGGTGCCTTCGGTATTAGGTTGGAGAATGTACTTGTAGTGAAGGATGCCGATACAAAATTTAATTTTGGCGATAAAGGCTACTTATCGTTCGAGCACATAACATGGGCACCATACCAAAGAAAGTTGATCAACACAAGTCTTCTCACATCTGAAGAATTGGATTGGGTGAACACTTACCATTCAGAATGCAGGGATATTCTTGCTCCATATTTGGACGAATCCGAGAAGTTAAACAGTGCTGAGACTCACAATGCTAAGGTGCTTTTTGGGGAAGAGCCACTAGTTATTGCAAGAGGAGGGTTATCTGGAGTGTTTCCAGAATCAAGCCCTTTTGCAAATCAAATGGCTTTGGTTTCAGGTTTACATAACACAGTTTTGTATTGTAATCTTCAACTCACCAAAGATGCGGTAGGCATTTGCTTAACTGATCTCAGGCTTCAAAATTCAACCAATATTGAAGATGTTTTCCCTGGGGAACATAAGTCTTATAATGTTAATGGAAAGATTATCAAAGGATGGTTTTCTGTTGATTACATGTCTAGGACTCTCTTTAACAAACTCTTCATGATTCAAAGTGTCCTCTCTCGTCCTAGTCTCTACGACGGTACTTTGCCAATCGCGGCTGTCGAAGATGTCATGGGGATTAAACCGACTCAGTTTTGGTTGAATGCCGAGCACGAAGCATTCTACGCTGAGCACAATTTGAGTGTATCATTATACCTTCAAAAGGCATTGAGAATGATGCGAATAAACTTTGTGTCATCTTCAGAGATTGGAATATTGAAAGGGATAAGTGGGAGTGTGAACAAAGCTAGAACAAAGCTGGTCTTCAGATTCTTAGAAGCCACTGAAATAGAACCAACAACAAAGAAATCATATGGTGTACTGGCTCAAGAACTTCCCATGATTAAGACATTTGCCTCAGGAATTCTCGTCAGAAAAGAATACATTTGGCCAATTGGTCAAGACAAGTATGTGCAGCCTGCAACAACTCTTGTCATGGATGCTCATAAGCTTGGCTTGGAAGTTTATGCTTCTGGCTTTGCAAATGATGCCATTGTTGGTTACAATTATAGCTATGATCCAATCCGTGAATACCTTCAGTATTTTGATAATGGCCATTTTGCTGTTGATGGGGTCCTTACTGATTTTTCTCCTGCTGCTTCTCAAGCCGTTGCCTGCTATTCGAGTTTTCGCAACAATGGCAAGCCTCAACCTGGATTAGAGCAAGCATTGGTGATAAGCAGCAATGGGGCAAGTGGGGATTTCCCAGGCTCAACTGACCTTGCTTACCAAAGAGCAATTGATGATGGGGCTGATGTTATTGATTGTTCAGTTCAATTATCAAAAGATGGAGTTCCTTTCTGTATGGATATGGCAGATCTTTTGACAGGTACAACTGTTGTCACTTCTTTCTCAGCTCGAACTACAACTATCCCTGAAGTTCAATCTGAAGCTGGAATCTTCTCTTTTGATCTTACTTGGGCGGAGATTTTGACTCTCAAACCTCAAATTACAAACCCTTTCATGGCTTCTTCTGGCCTTGCTCGTAATCCAGCCTTTAAAAACAAGGGCAAGTTCATGACTCTCCCTGAGTTTCTAGAGTTTGCTAAAGCCAAAGCTGTTTCTGGGATTATGATCAACATCCAAAATGCGGCGTATTTGGCTTCAAAGAAAGGTCTAGACATGGTGGGAACTGTCTCCACTGCCTTAATAAATTCCACTTTTGACAAACAATCAACACAACAAGTTTTCATTAGATCAGATGATACTTCTGTGTTGTCTTTTTTCAAGGCAAAGTTCCCAAGTTTCATTAGAGTTTTAACTGTTGACACAAAGATTGGTGATGCCCCAAAAGATGCTCTTGAAGAGATCAAACGTTATGCCGAAGTTGTAGCTATTCCTCGTGGCTCTATCATTGAAATAACAAACTATTTCACTACTGGCCTCACTAAAGTAGTTGCTGAAATTAAGGCTTCAAATCTCTCTGTCTTTGTTTATGTCATGAGAAATGAATATGTTTCCTTGGCCTTTGATTACTACTCTGAAGCCTCCATGGAAATCTCTACCTTTGTCGACTACTTCCACGTTGATGGCATCATTACCGAATTCCCCAATACCGCTAAACGATACATGACATGTCCGTGCCGACCGACTCAGCTGAACCCGAATGGAGCTCCATATATAATTGTACCGCCTGAAATTGGTTTACTCATGGAAATGGTGGCTCCAGAGGCTAAACCACCTACTGATCCTCCATTGCCGCCATTGGATGCTGATAATGTCATTGATCCACCGCTCCCGGCAGTGGTCAAAACGTCAGCCAGCAATCCTTCAGGTGTTGCCGACGGGCCTGCCGCAGCCACCCCATCAGCCGCTGTATCAAATGTTGCTAACTTGTTTCTTTCTTTACTATCAGTTGTGGTGCTTAACTTCTTCATTTTACACTTCTGCATTGTAATAATCAATACTCATTAA 4266 42.78 MADILSALRVLMASHTPPLDALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALVTQREALLWTDGRYFLQAIQQLSDQWKLMRMGEDPSVDLWMAENLPADAAVGVDPWCVSVDTAQKWIHAFSKKQQKLVQTTTNLVDEVWKNRPPPEINPVMIHPLEYTGRSVEDKLKTLRTRLSQEKAHGLIVTGLDEVAWLYNIRGSDVSYCQVVHAFAIVTLNSAFFYVDKRKVSDEVRLYMEQNGIEVRDYSAVITDVSLLASNQLNLSSFVKGPEVRANMEVELSSIDIAGSNGTKVESQSSGLIWLDPAQCCYVLYSKLNSDKVLLQQSPLALAKALKNSVELDGLKKAHIRDGAAVVQYLVWLDKQLQDIYGAAGYFREGDGVRKPKPSDSKKLTEVSVSDKLEAFRASKELVLPHPAYSYLSEVLISVGLFENLHLQHFRGLSFPTISSVGSNAAIIHYGPQAETCAELDPESIYLFDSGAQYLDGTTDITRTVHFGLPSAHEKACYTAVLKGHIALGNARFPNGTNGHSLDILARVPLWKDGLDYRHGTGHGIGSFLNVHEGPHLISFRPQARNVPLQASMTVTDEPGYYEDGAFGIRLENVLVVKDADTKFNFGDKGYLSFEHITWAPYQRKLINTSLLTSEELDWVNTYHSECRDILAPYLDESEKLNSAETHNAKVLFGEEPLVIARGGLSGVFPESSPFANQMALVSGLHNTVLYCNLQLTKDAVGICLTDLRLQNSTNIEDVFPGEHKSYNVNGKIIKGWFSVDYMSRTLFNKLFMIQSVLSRPSLYDGTLPIAAVEDVMGIKPTQFWLNAEHEAFYAEHNLSVSLYLQKALRMMRINFVSSSEIGILKGISGSVNKARTKLVFRFLEATEIEPTTKKSYGVLAQELPMIKTFASGILVRKEYIWPIGQDKYVQPATTLVMDAHKLGLEVYASGFANDAIVGYNYSYDPIREYLQYFDNGHFAVDGVLTDFSPAASQAVACYSSFRNNGKPQPGLEQALVISSNGASGDFPGSTDLAYQRAIDDGADVIDCSVQLSKDGVPFCMDMADLLTGTTVVTSFSARTTTIPEVQSEAGIFSFDLTWAEILTLKPQITNPFMASSGLARNPAFKNKGKFMTLPEFLEFAKAKAVSGIMINIQNAAYLASKKGLDMVGTVSTALINSTFDKQSTQQVFIRSDDTSVLSFFKAKFPSFIRVLTVDTKIGDAPKDALEEIKRYAEVVAIPRGSIIEITNYFTTGLTKVVAEIKASNLSVFVYVMRNEYVSLAFDYYSEASMEISTFVDYFHVDGIITEFPNTAKRYMTCPCRPTQLNPNGAPYIIVPPEIGLLMEMVAPEAKPPTDPPLPPLDADNVIDPPLPAVVKTSASNPSGVADGPAAATPSAAVSNVANLFLSLLSVVVLNFFILHFCIVIINTH 1421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 35580477 35594315 - CePI673135_04g016270.1 Cec04g1627 201109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1627 1421 ProSiteProfiles GP-PDE domain profile. 689 988 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cec04g1627 1421 Pfam Glycerophosphoryl diester phosphodiesterase family 1014 1303 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cec04g1627 1421 ProSiteProfiles GP-PDE domain profile. 1007 1308 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cec04g1627 1421 FunFam Xaa-Pro aminopeptidase P 337 683 - -
Cec04g1627 1421 CDD GDPD_SHV3_repeat_2 1007 1307 - -
Cec04g1627 1421 CDD GDPD_SHV3_repeat_1 689 987 - -
Cec04g1627 1421 Pfam Creatinase/Prolidase N-terminal domain 147 343 - -
Cec04g1627 1421 Pfam Creatinase/Prolidase N-terminal domain 6 138 IPR000587 -
Cec04g1627 1421 ProSitePatterns Aminopeptidase P and proline dipeptidase signature. 551 563 IPR001131 -
Cec04g1627 1421 Gene3D - 146 335 IPR029149 -
Cec04g1627 1421 FunFam Xaa-pro aminopeptidase P 1 145 - -
Cec04g1627 1421 Gene3D - 1 145 IPR029149 -
Cec04g1627 1421 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 1005 1308 - -
Cec04g1627 1421 Gene3D Creatinase/methionine aminopeptidase superfamily 337 684 IPR036005 -
Cec04g1627 1421 CDD APP 346 619 IPR033740 GO:0070006(InterPro)
Cec04g1627 1421 SUPERFAMILY PLC-like phosphodiesterases 688 986 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cec04g1627 1421 Pfam Metallopeptidase family M24 437 610 IPR000994 -
Cec04g1627 1421 Pfam C-terminal region of peptidase_M24 623 671 IPR032416 -
Cec04g1627 1421 SUPERFAMILY PLC-like phosphodiesterases 1008 1308 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cec04g1627 1421 Gene3D Phosphatidylinositol (PI) phosphodiesterase 687 988 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cec04g1627 1421 Gene3D Phosphatidylinositol (PI) phosphodiesterase 1006 1309 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cec04g1627 1421 PANTHER XAA-PRO AMINOPEPTIDASE 1 3 414 IPR050422 -
Cec04g1627 1421 FunFam Probable Xaa-Pro aminopeptidase P 146 335 - -
Cec04g1627 1421 SUPERFAMILY Creatinase/aminopeptidase 341 648 IPR036005 -
Cec04g1627 1421 SUPERFAMILY Creatinase/prolidase N-terminal domain 41 130 IPR029149 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1668 Cec-Chr2:34335230 Cec04g1627 Cec-Chr4:35580477 4.50E-144 dispersed
Cec04g1627 Cec-Chr4:35580477 Cec09g2195 Cec-Chr9:38884111 4.40E-159 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1627 K01262 - csv:101216172 1226.46