Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1630 ATGGCGGACCATTCCGATGAACAACACTCCTTCAGGACAATTGCCACTGCTTTCATTCCGTTCATTGGGGACGATGATTCTGATGATTTGGGTCCCGAGTTCGTCTTCAACATCGAACCCACTTTGCTTATTGACCCTCGTTGTTTGAAGATTGGTGAAGTTATTGGGGAAGGTTCATGTTCCATTGTTTATGAAGGACTGTACGATTGTCAGCCTGTTGCCGTGAAGATTATACAGCCAATTAGAACATCATCTATAAGTCCTGAAAAGAAGGAGAGATTTCAGAGGGAGGTTATGTTGCTATCAAGAGTGAATCATGAGAACGTTATTCAGGTCTCCTCAGTATCTTTCTTGGTTAATCTCAATCCTTCCATTGCTTTAAACAGTTTTAAAAGGCTCAGCATTCAAACCATAAATTTTCATCCATTGCCTGGAGTTGCTGATATCATATTCTACTTAAAACAGTTCATTGGTGCTTCCGTAGAGCCGACATTGATGATAATCACTGAGCTTATGAGAGGTGGAACACTCCAGAAGTACTTATGGAGCATCCGGCCAGAGACCCCAGATTTGAAGCTTTCCTTAAGTCTTGCTCTAGATCTATCACGAGTAATGGCATACTTGCATTTAAATGGCATCATTCATCGCGACTTAAAGCCAAGCAATCTGCTGCTAACAGAAGACAAGCAACGGGTTAAGCTGGCCGACTTTGGGTTGGCTAGAGAGGAAATATCTGGTGAAATGACTACTGAGGCTGGTACTTACCGTTGGATGGCCCCTGAGCTATTTAGCATTGAACCATTGCCTGTTGGAGGTAAGAAATGCTATGACCACAAGGCAGATGTCTACAGCTTCTCAATAATTCTTTGGGAATTACTGACAAACAAGACTCCATTCAAAGGCAGGAATAATGTAATGGTGGCATATGCCACAGCCAAGAACATAAGACCAAGTCTTGAGGAAATCCCAGAAGATATTGCCCCTCTCTTGCAGTCATGCTGGGCTGAGGATCCCAATGGCCGTCCAGAATTTACAGAAGTCACAGATTCTCTTTGTAATCTTCTTCAATCATTTGTGTTAAAAGAATCTTCACTTCCGAACATGGACGACAAAACAGAGGAGGAGGAGGTGGAGTGTGCATCAGAGACATCGTCTTCTCAAAGCAAGAGAGGGCCAAAGGCTGGAAGACATAGAAACTCTTCATTCTGCCTCAAATGTTGCCGCAACTTCTGCTTGTTCATAGGAGATGGGTTGTTATCCCCAGTTCCAGTTTTCCTTCTTAGTTGGCAGAGGCGGTTCCACTGGTGGCGCCACCCTCTTCTTCCGCCGTACTCTGCATCTCTACCCCCGCCCGGCGCCGCCGCCTCCCGACAACCGGCACACTCGCCTTTACACACGAAGTTACCAGGTTTTGTTCTGCGGGAAGTTTGTGGTTTATTTTCTGAGCCGCAGAGATTGGATTTGGATTTCGAGAGGTCCAGAATCCACAATTCTCAACCGTTGATCTTCCAGTCAACAACCTACATACAGACACGCCATCCACCTGGACTTCCACATCATTCCTCTCAAAGCTTCTTGCGCCATGAAAGCAGGTTGGTCGTAGAAATCATCAGGACACAGGACTGCAGCTCGAAAATCATTGAATTATAG 1650 45.21 MADHSDEQHSFRTIATAFIPFIGDDDSDDLGPEFVFNIEPTLLIDPRCLKIGEVIGEGSCSIVYEGLYDCQPVAVKIIQPIRTSSISPEKKERFQREVMLLSRVNHENVIQVSSVSFLVNLNPSIALNSFKRLSIQTINFHPLPGVADIIFYLKQFIGASVEPTLMIITELMRGGTLQKYLWSIRPETPDLKLSLSLALDLSRVMAYLHLNGIIHRDLKPSNLLLTEDKQRVKLADFGLAREEISGEMTTEAGTYRWMAPELFSIEPLPVGGKKCYDHKADVYSFSIILWELLTNKTPFKGRNNVMVAYATAKNIRPSLEEIPEDIAPLLQSCWAEDPNGRPEFTEVTDSLCNLLQSFVLKESSLPNMDDKTEEEEVECASETSSSQSKRGPKAGRHRNSSFCLKCCRNFCLFIGDGLLSPVPVFLLSWQRRFHWWRHPLLPPYSASLPPPGAAASRQPAHSPLHTKLPGFVLREVCGLFSEPQRLDLDFERSRIHNSQPLIFQSTTYIQTRHPPGLPHHSSQSFLRHESRLVVEIIRTQDCSSKIIEL 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 35622314 35631465 + CePI673135_04g016300.1 Cec04g1630 201112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1630 549 CDD STKc_MAP3K-like 55 351 - -
Cec04g1630 549 Gene3D Transferase(Phosphotransferase) domain 1 152 390 - -
Cec04g1630 549 SUPERFAMILY Protein kinase-like (PK-like) 42 363 IPR011009 -
Cec04g1630 549 PANTHER SERINE-THREONINE PROTEIN KINASE 43 354 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cec04g1630 549 Gene3D Phosphorylase Kinase; domain 1 40 127 - -
Cec04g1630 549 Pfam Protein tyrosine and serine/threonine kinase 49 116 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1630 549 Pfam Protein tyrosine and serine/threonine kinase 155 351 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1630 549 ProSiteProfiles Protein kinase domain profile. 49 359 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1630 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1630 549 SMART serkin_6 49 358 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1630 549 MobiDBLite consensus disorder prediction 366 399 - -
Cec04g1630 549 PRINTS Tyrosine kinase catalytic domain signature 169 182 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1630 549 PRINTS Tyrosine kinase catalytic domain signature 322 344 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1630 549 PRINTS Tyrosine kinase catalytic domain signature 207 225 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1630 549 PRINTS Tyrosine kinase catalytic domain signature 280 302 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1630 Cec-Chr4:35622314 Cec10g1393 Cec-Chr10:28233276 2.20E-74 dispersed
Cec04g1630 Cec-Chr4:35622314 Cec06g1938 Cec-Chr6:32730833 9.60E-78 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71934 PF00069 Pkinase 6.70E-46 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1630 - - - 0.0