Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec04g1655 | ATGGAGACGAGAGGTGAAGATGAGGAAATAGGAACTCCTAATTCCCCTTTGTGCTATAATAATCCATCATCAAATAGGGAATCTTCAACCAAACTGCCTAATTCTGATAATCCATTTCTAACAACAGCTGCTGATAGAAGAAGAGATCACACAGTACCCCAACTCCATTTCTCTCATCACCACAAACTGAATCTCCATCATATACACAAACAACACACAAGAGACCATCCTGAAGCAACCCCCGATCCTCCAATCCAGCCCTCCATTTCTGCCTCACCACCATCTGCTATCACTCCGCCGCTGCCAATTGCCAGCAGTAGACTGATCTCAAGAACACCACCATTTCCAGGTGCAACGGGCAACAGTATTCCTTCATCGGTAATTCGATACCGAGAATGTCTGAAGAACCACGCAGCAAGTACCGGAGGCCATGTTCTCGATGGCTGCGGCGAGTTCATGCCTAATGGAGAAGATGGAACGCCTGAGGCCTTGAAGTGTGCCGCCTGTGAATGCCATCGAAACTTTCACCGGAAAGAGATGAAAGATGATCCACCCTCGCAGCAAGCTTTACCCAGTGGTTTCTTCATCTCCAACTCCATCAGAAACAATGGCCACCGCACTGATAGGACACCAGTTGTTCCAGTGTCCCGTCACCATCAATTGCCGGCGGTTCCAATTTCTTCAATGATGATGGCATTTGGTGGAGGAAGCAATGGAGCTCCGGATGAGTCTTCGAGTGAGGACCTGAACATGTATCACCCGTCAAATAATGGAGCCCGGGACCTGTTCGGTCAGCAGACACAACTAACAAAGAAACGATTTAGGACAAAGTTCACTCAGGGACAGAAGGACAAGATGGTAGAATTTGCTGAAAAGTTGGGGTGGAAGATTCAGAAACATGATGAACTGGAAGTGCAGCAGTTCTGCGCTGAGGTGGGAGTACGGAGGCAGGTTTTCAAGGTTTGGATGCACAACAACAAACAAGCCATGAAGAAGAAACAGATGTAA | 1008 | 47.62 | METRGEDEEIGTPNSPLCYNNPSSNRESSTKLPNSDNPFLTTAADRRRDHTVPQLHFSHHHKLNLHHIHKQHTRDHPEATPDPPIQPSISASPPSAITPPLPIASSRLISRTPPFPGATGNSIPSSVIRYRECLKNHAASTGGHVLDGCGEFMPNGEDGTPEALKCAACECHRNFHRKEMKDDPPSQQALPSGFFISNSIRNNGHRTDRTPVVPVSRHHQLPAVPISSMMMAFGGGSNGAPDESSSEDLNMYHPSNNGARDLFGQQTQLTKKRFRTKFTQGQKDKMVEFAEKLGWKIQKHDELEVQQFCAEVGVRRQVFKVWMHNNKQAMKKKQM | 335 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 35792764 | 35793771 | + | CePI673135_04g016550.1 | Cec04g1655 | 201137 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec04g1655 | 335 | FunFam | Zinc-finger homeodomain protein 2 | 261 | 332 | - | - | |
Cec04g1655 | 335 | Pfam | ZF-HD protein dimerisation region | 128 | 180 | IPR006456 | - | |
Cec04g1655 | 335 | NCBIfam | ZF-HD homeobox protein Cys/His-rich dimerization domain | 129 | 180 | IPR006456 | - | |
Cec04g1655 | 335 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 91 | 329 | - | GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0050793(PANTHER) | |
Cec04g1655 | 335 | MobiDBLite | consensus disorder prediction | 14 | 41 | - | - | |
Cec04g1655 | 335 | SUPERFAMILY | Homeodomain-like | 267 | 332 | IPR009057 | - | |
Cec04g1655 | 335 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 130 | 179 | IPR006456 | - | |
Cec04g1655 | 335 | Gene3D | - | 260 | 332 | - | - | |
Cec04g1655 | 335 | MobiDBLite | consensus disorder prediction | 65 | 95 | - | - | |
Cec04g1655 | 335 | MobiDBLite | consensus disorder prediction | 80 | 95 | - | - | |
Cec04g1655 | 335 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Cec04g1655 | 335 | NCBIfam | homeobox domain, ZF-HD class | 271 | 328 | IPR006455 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g1655 | Cec-Chr4:35792764 | Cec08g1176 | Cec-Chr8:23624466 | 1.20E-41 | dispersed | |
Cec04g1655 | Cec-Chr4:35792764 | Cec07g0928 | Cec-Chr7:23006035 | 2.00E-46 | wgd | |
Cec04g1655 | Cec-Chr4:35792764 | Cec08g1547 | Cec-Chr8:27126900 | 1.30E-53 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29392 | PF04770 | ZF-HD_dimer | 9.90E-31 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec04g1655 | - | - | - | 0.0 |