Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec04g1692 | ATGAGAAATCTGCGAATTCTTTCCCCTCATTTCTCCAGGATTCGCAGAACCTTCGCTCAAAACCCTTGCTCCGATTCTCCGTCCACTCTTAACTTAAATCTTCTTGGATTGGAGAGTTTTGCATCGTCGTCATCTCTGAACCATCGGAATTACACCACTGCTTCACCTGAATCAAGACCACCTCATTCTGAGAGAGTTTCGGCCATTGTGGATGAGATCTCCGGTCTCACGCTACTCGAGGTTGCGGACCTCACGGAGGTTCTACGAGAAAAATTGGATGTGAAGGAGATGCCGGTAATGGCAGTGATGATGCCTGGGATGGGGTTCGGCGGCTTGCAAGGTGCCGGTAAGGGTGGTCCTGGAGCGAAAGGCGGTGAAGAGAAAAAGGCGGAGAAGACGGCGTTCGATGTGAAGCTTGAAGCTTTTGATGCTGCGTCCAAAATAAAGATCATTAAGGAAGTGCGAACGTTTATGAATTTGGGGTTGAAGGAGGCTAAGGATTTGGTGGAGAAAGCGCCTACGCTTCTGAAGAAGGGGGTGACTAAAGAGGAAGCTGATACGATCATTGCCAAGATGAAGGAGACCTTGGTAGCCTATCTTAGTTCTTGCGCATTTATGAAGACGTTGTGTCTCCCTAAATTCCTGGAGTTTCGAGATAAGAAAGTGTGTGCAGTTCGGAAGGGAGAAGATTTATCCAGTTATTGGTCTATTCTATTTGTTATTCCTGCGCGCTCTGTTTCTTATGATTATATAGCATTGGCTACTTCTTCTGTGAGCTTTGTGAACTACATCTTAATTCCGTTTGTTTCTTCTACCAACAGGATGCTGCAGAAAATACCAAGCTTTTATGGCAATTTTCAAGTCAGAGCAGCAGTTGAAGATATATTTCATTTGGGATGGATGAGGACATGGGATTGTTTGGTTTCCTTCAAAACATATGGAGCATTCTTTATCAGAACTTTCCATATTTTTTGCCTCGACCTGGAACTGTATTGGTGGATGGATATTTCTTGGTACTTGCCTTTGCCGGATATGTGGCAGTGGGAGAATGCCACCGCCGGTGCCCTCGCCGGATTTGCCACCGTCGCCGCCATGCATCCTCTAGATGTCGTCCGCACCCGGTTTCAAGGTAGCTTACTTATGTGGGCGCTCAAAGTGTCAATGAACAATCTGGCGTTTCAAGTTTTATTTCCTTTAACGTTCATTTGTTCTCCAATTGTCTTCACAATGGCAGTTTATGATGGCAGAGGATCAAATCTCCCGACTTACAAGAATACGGCTAATGCAATCTTCACTATTACTCGGATGGAGGGCTTGAGAGGGCTATATGCAGGCTTCTATCCTGCAGTTCTCGGGTCATCTGTTTCTTGGGGTTTATATTTCTTTTTCTATGGTAGAGCCAAAGAAAGATATTCTGACAATGGAAAGAAGGACCTGAGTCCTAGTCTTCATCTTGCTTCTGCAGCGGAAGCAGGAGCTTTGGTTTGTTTTTGCACGAATCCAGTTTGGCTTGTGAAAACAAGAATGCAGCTTCAGAGTCCTCTTCATCAAGCTCAACCTTATTCTGGGCTAAATGATGCCTTCAGAACCATTTTGAGAGAGGAAGGTTTTGCTGCTCTTTATAAAGGGATTGTTCCTGGCCTTATGCTTCAGGTTTCTCATGGTGCCATTCAATTTACAGTTTATGAAGAACTCCGTAAAGTTATTGCCAACTCGAGGTCTAAAGGGACCAGAGTGGATGCTCAAAGTTCTGGGGAATTACTGAATTCGGGTGATTATGCTGTTCTTGGAGGATCTTCTAAAATTGCTGCCATGCTTCTGACATACCCATTTCAAGTTATTCGAGCTCGATTGCAGCAAAGACCAGGGAATGATGGGATCCCAAGATACATGGATAGCTTCCACGTTCTTAAGGAAACTGCACGGTTTGAGGGCATTCATGGGTTTTACAGGGGAATTACACCAAACCTTCTAAAGAATGTCCCCGCGGCTTCAATCACATTTATTGTTTGTCGGCGTTTACTTGGAGCTCGTCAGTTATCCATGGTATTGGTGGCAGAAGGAGCTGAGATGGATTCTTTGTGTTTACTAGCAGCCATTTGTTCAACACCATCACAAACAAGTCCAGAGGAGTTATTGTTTTGGGTTCTCTGGTGTTGGTTTTGGTTGAAGAAGAAGCATATTGGAAACAAAGATGGGATTCCTAAAGGGAATTTGGGTTGGCCTTTCTTTGGTGAAACTCTTCAATTCATTTCGTCTGGCTATTCTTCTCGTCCTGTCACCTTCATGGACAAACGCAAATCTCTGTATGGGAATGTGTTTAAAACCAACATTTTGGGCACACCCATTATAGTATCAACTGATTCAGAGGTGAATAAGGTTGTTTTACAAAACCATGGGAATATATTTATCCCAGCTTACCCAAAATCAATAACAGAATTACTTGGTACATTTTCAATTCTAAGAATGAATGGAAATGTTCAAAAAAGAGTTCATACAATAATTGGAGCCTTCCTAAGATCCCCTCAACTCAAAGCCCAAATCACACAAGATATTCAAAACACTGTTAAACTTCGACTTGCCAATTGGAATTCCTCTCAATTGGTTTATCTCCAAACTGAAACCAAACAGATCACATTTGAAGTATTGGTGAAGTTGTTGATGAGTGTGGGACCTGGCGAAGAATTGAAGATTTTGAAAAGGGAATTTGAAGAGTTTATCAAAGCTTTGATTTGTATACCCATTAAATTACCCGGAACTAGGCTATATAAATCTTTGAAGGCCAGAGAGAAGCTGTTGAAAATTGTGAGTAAGATTGTGGAAGATCGAAAGTCGAGGGTGGAGGAGAAGGTTGCACCGAGAGATGCGGTGGACGTGCTCTTACAGGATCACGATGAGATTCAAGGGCTACCGTTGGATTTCATCAGCAGTCACATCATAGAGTTGATGATTCCCGGCGAGGAGACGGTGCCGATGGCCATGACCCTCGCCGTCAAGTTTCTCAGTGATTGCCCCCGCGCTCTTGCCCAATTAATGGAAGAGAATATGAAACTGAAGAAGCAGAAGGATGGCTCTGGGGAGGAGTATACGTGGACAGATTACATGTCTCTACTATTTACTCAAAATGTGATCAGTGAAACATTAAGAATGGCCAATATCATCAATGGGGTTTGGAGAAAAGCTCAAAAAGATGTGCAAATCAAAGGCTATTTAATACCACAAGGATGGTGTGTCTTGGCGTCTTTTATTTCAGTTCATATGGACGAGAAGAACTACGCAAACCCACATCAGTTTGATCCATGGAGATGGGAGAAAAATTTGTCTGCAACAAACAACCATGACTTTACACCTTTTGGAGGGGGACAGAGGCTATGTCCTGGCATCGAACTCGCCAGGCTCGAAATCTCAATTTTCCTTCATCATCTCGTCACTACCTACAATGAGGATGAGAAGGAAGCTGCCTATCACGATCACAACCTTAAGCTCTTGATTGGATTCAATCGTCTCAACAACTTCAATACCGAGCTGTCGAGGAAATAA | 3540 | 43.42 | MRNLRILSPHFSRIRRTFAQNPCSDSPSTLNLNLLGLESFASSSSLNHRNYTTASPESRPPHSERVSAIVDEISGLTLLEVADLTEVLREKLDVKEMPVMAVMMPGMGFGGLQGAGKGGPGAKGGEEKKAEKTAFDVKLEAFDAASKIKIIKEVRTFMNLGLKEAKDLVEKAPTLLKKGVTKEEADTIIAKMKETLVAYLSSCAFMKTLCLPKFLEFRDKKVCAVRKGEDLSSYWSILFVIPARSVSYDYIALATSSVSFVNYILIPFVSSTNRMLQKIPSFYGNFQVRAAVEDIFHLGWMRTWDCLVSFKTYGAFFIRTFHIFCLDLELYWWMDISWYLPLPDMWQWENATAGALAGFATVAAMHPLDVVRTRFQGSLLMWALKVSMNNLAFQVLFPLTFICSPIVFTMAVYDGRGSNLPTYKNTANAIFTITRMEGLRGLYAGFYPAVLGSSVSWGLYFFFYGRAKERYSDNGKKDLSPSLHLASAAEAGALVCFCTNPVWLVKTRMQLQSPLHQAQPYSGLNDAFRTILREEGFAALYKGIVPGLMLQVSHGAIQFTVYEELRKVIANSRSKGTRVDAQSSGELLNSGDYAVLGGSSKIAAMLLTYPFQVIRARLQQRPGNDGIPRYMDSFHVLKETARFEGIHGFYRGITPNLLKNVPAASITFIVCRRLLGARQLSMVLVAEGAEMDSLCLLAAICSTPSQTSPEELLFWVLWCWFWLKKKHIGNKDGIPKGNLGWPFFGETLQFISSGYSSRPVTFMDKRKSLYGNVFKTNILGTPIIVSTDSEVNKVVLQNHGNIFIPAYPKSITELLGTFSILRMNGNVQKRVHTIIGAFLRSPQLKAQITQDIQNTVKLRLANWNSSQLVYLQTETKQITFEVLVKLLMSVGPGEELKILKREFEEFIKALICIPIKLPGTRLYKSLKAREKLLKIVSKIVEDRKSRVEEKVAPRDAVDVLLQDHDEIQGLPLDFISSHIIELMIPGEETVPMAMTLAVKFLSDCPRALAQLMEENMKLKKQKDGSGEEYTWTDYMSLLFTQNVISETLRMANIINGVWRKAQKDVQIKGYLIPQGWCVLASFISVHMDEKNYANPHQFDPWRWEKNLSATNNHDFTPFGGGQRLCPGIELARLEISIFLHHLVTTYNEDEKEAAYHDHNLKLLIGFNRLNNFNTELSRK | 1179 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 36045955 | 36063351 | + | CePI673135_04g016920.1 | Cec04g1692 | 201174 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec04g1692 | 1179 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 1118 | 1127 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cec04g1692 | 1179 | Pfam | Mitochondrial carrier protein | 479 | 571 | IPR018108 | - | |
| Cec04g1692 | 1179 | Pfam | Mitochondrial carrier protein | 422 | 473 | IPR018108 | - | |
| Cec04g1692 | 1179 | Pfam | Mitochondrial carrier protein | 348 | 376 | IPR018108 | - | |
| Cec04g1692 | 1179 | Pfam | Mitochondrial carrier protein | 591 | 670 | IPR018108 | - | |
| Cec04g1692 | 1179 | Pfam | Cytochrome P450 | 735 | 1147 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec04g1692 | 1179 | SUPERFAMILY | Cytochrome P450 | 730 | 1147 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec04g1692 | 1179 | SUPERFAMILY | Mitochondrial carrier | 347 | 670 | IPR023395 | - | |
| Cec04g1692 | 1179 | FunFam | 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 | 724 | 1160 | - | - | |
| Cec04g1692 | 1179 | SUPERFAMILY | ClpS-like | 131 | 194 | IPR014719 | - | |
| Cec04g1692 | 1179 | Gene3D | - | 132 | 195 | IPR014719 | - | |
| Cec04g1692 | 1179 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 591 | 677 | IPR018108 | - | |
| Cec04g1692 | 1179 | Coils | Coil | 1008 | 1028 | - | - | |
| Cec04g1692 | 1179 | FunFam | Folate transporter 1, chloroplastic | 476 | 679 | - | - | |
| Cec04g1692 | 1179 | Pfam | Ribosomal protein L7/L12 dimerisation domain | 67 | 106 | IPR008932 | GO:0003735(InterPro)|GO:0005840(InterPro)|GO:0006412(InterPro) | |
| Cec04g1692 | 1179 | Gene3D | Mitochondrial carrier domain | 348 | 675 | IPR023395 | - | |
| Cec04g1692 | 1179 | SUPERFAMILY | Ribosomal protein L7/12, oligomerisation (N-terminal) domain | 66 | 137 | IPR036235 | GO:0003735(InterPro)|GO:0005840(InterPro)|GO:0006412(InterPro) | |
| Cec04g1692 | 1179 | CDD | CYP90-like | 766 | 1151 | - | - | |
| Cec04g1692 | 1179 | FunFam | 50S ribosomal protein L7/L12 | 131 | 197 | - | - | |
| Cec04g1692 | 1179 | Gene3D | Single helix bin | 65 | 131 | IPR036235 | GO:0003735(InterPro)|GO:0005840(InterPro)|GO:0006412(InterPro) | |
| Cec04g1692 | 1179 | PRINTS | P450 superfamily signature | 1042 | 1053 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec04g1692 | 1179 | PRINTS | P450 superfamily signature | 1116 | 1125 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec04g1692 | 1179 | PRINTS | P450 superfamily signature | 1125 | 1136 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec04g1692 | 1179 | PRINTS | P450 superfamily signature | 840 | 853 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec04g1692 | 1179 | CDD | Ribosomal_L7_L12 | 64 | 194 | IPR000206 | GO:0003735(InterPro)|GO:0005840(InterPro)|GO:0006412(InterPro) | |
| Cec04g1692 | 1179 | PRINTS | E-class P450 group I signature | 1081 | 1105 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec04g1692 | 1179 | PRINTS | E-class P450 group I signature | 974 | 991 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec04g1692 | 1179 | PRINTS | E-class P450 group I signature | 1125 | 1148 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec04g1692 | 1179 | PRINTS | E-class P450 group I signature | 1115 | 1125 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec04g1692 | 1179 | PRINTS | E-class P450 group I signature | 767 | 786 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec04g1692 | 1179 | Pfam | Ribosomal protein L7/L12 C-terminal domain | 135 | 194 | IPR013823 | GO:0003735(InterPro)|GO:0006412(InterPro) | |
| Cec04g1692 | 1179 | PANTHER | MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED | 347 | 677 | IPR044712 | GO:0006862(InterPro)|GO:0008517(PANTHER)|GO:0009941(PANTHER)|GO:0015230(PANTHER)|GO:0022857(PANTHER)|GO:0055085(InterPro)|GO:0055085(PANTHER)|GO:1904947(PANTHER) | |
| Cec04g1692 | 1179 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 345 | 470 | IPR018108 | - | |
| Cec04g1692 | 1179 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 479 | 568 | IPR018108 | - | |
| Cec04g1692 | 1179 | Gene3D | Cytochrome P450 | 724 | 1162 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec03g0405 | Cec-Chr3:4457421 | Cec04g1692 | Cec-Chr4:36045955 | 2.00E-21 | dispersed | |
| Cec04g1455 | Cec-Chr4:34126529 | Cec04g1692 | Cec-Chr4:36045955 | 1.10E-24 | dispersed | |
| Cec04g1692 | Cec-Chr4:36045955 | Cec07g1484 | Cec-Chr7:30431501 | 2.30E-129 | dispersed | |
| Cec04g1692 | Cec-Chr4:36045955 | Cec09g0056 | Cec-Chr9:493392 | 1.40E-137 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec04g1692 | K12637 | - | csv:101203911 | 787.719 |