Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1708 ATGGATTCCCAATCTCTTCTTCAACCACTCAATATGGCATTCTTTTTCACACTCCCTCTTCTGTTTCTGCTGGGACGGCTGTTCCGACGTTTCCGGCGAAAGTTTCCGTTTCCACCCGGCCCAAAAGGCCTCCCCTTCATCGGCAATATGCTGATGATGGACCAGCTCACCCACCGTGGACTCGCCAATCTCGCCACCCGCTACGGCGGAATTTTCCATATGCGCATGGGCTTCCTTCATATGGTCACTGTCTCCAACCCCGACATCGCCCGCCAAGTTCTTCAGGTCCATGATGGTATTTGTTCTAATCGTCCGGCCACCATTGCCATAACATACTTAACGTACAACCGCGCCGACATGGCTTTCGCTCACTATGGCCCATTCTGGCGGCAGATGCGTAAGCTCTGCGTCATGAAATTATTCAGTCGGAAGCGAGCTGAGTCATGGCAGTCTGTTTGTGATGAGGTGGACACCACCATTAGAAAGGTCGCCGTTCAGACGGGAACCACCATGAACATCGGGGAGCTAGTGTTTGAATTAACGAGAGATATTATTTATAGAGCCGCGTTTGGGTCGAGTGCAATGCAAGGTCAGGACGAGTTTATAAGTATCTTACAAGAATTCTCTAAACTTTTTGGAGCTTTCAATATTGCCGATTTTATTCCGAGTCTGGGTTGGATTGACCCTCAAGGCTTGAACAACAGACTCGTTAAGGCTCGTCAATCACTCGATAAATTCATTGACTCTATAATCGACGATCACATAAGTAAAAAAAGGAAGGAAGCAAAGTTATCAAATTATGATCATGAAATTGACAGCGATATGGTGGATGAATTGCTAGCTTTTTACAATGAAGACTCAACCATAATAAATGCATCAGATGATCTACAAAACAACATCAAACTCAGTCGTGACAACATCAAAGGCATCATCATGGACGTTATGTTTGGTGGGACGGAGACGGTAGCGTCGGCGATAGAGTGGGCCATGTCGGAGCTAATGAGAAGCCCAGAAGATTTAAAGAAAGCCCAACAAGAACTCGACCAAGTCGTCGGTCTCGAACGACGTGTCGAAGAAACCGACTTCGAAAATTTGACCTTTTTGAGATGCTGCCTCAAGGAGACTCTTCGGCTGCACCCACCAATCCCGCTCCTCCTCCATGAGATGGCGGAGGACGCGGTGGTCGCCGGCTACTTCATTCCGGCGAAATCTCGAGTCATGGTGAACGCGTGGGCCATTGGTAGGGATCCGGCGTCGTGGGACGACCCCGAAACATTCCGGCCGGCGAGGTTTCTAGAACAGGGGGTCCCGGATTTTAAAGGGAACAACTTCGAGTTCATTCCGTTCGGGTCTGGTCGGCGGTCTTGCCCCGGAATGCAACTGGGTTTGTATGGGCTTGAAATGGCGGTGGCCCACTTGTTGCACTGTTTCAATTGGGAATTGCCCGACGGGATGAGGCCGAGCGAAATGGACATGAGCGATATTTTCGGACTGACCGCTCCGAGAGCGACCCGGCTTGTGGCTGTGCCCACGAAACGGGTTCTATGTCCACTCCTGTGA 1560 50.06 MDSQSLLQPLNMAFFFTLPLLFLLGRLFRRFRRKFPFPPGPKGLPFIGNMLMMDQLTHRGLANLATRYGGIFHMRMGFLHMVTVSNPDIARQVLQVHDGICSNRPATIAITYLTYNRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVCDEVDTTIRKVAVQTGTTMNIGELVFELTRDIIYRAAFGSSAMQGQDEFISILQEFSKLFGAFNIADFIPSLGWIDPQGLNNRLVKARQSLDKFIDSIIDDHISKKRKEAKLSNYDHEIDSDMVDELLAFYNEDSTIINASDDLQNNIKLSRDNIKGIIMDVMFGGTETVASAIEWAMSELMRSPEDLKKAQQELDQVVGLERRVEETDFENLTFLRCCLKETLRLHPPIPLLLHEMAEDAVVAGYFIPAKSRVMVNAWAIGRDPASWDDPETFRPARFLEQGVPDFKGNNFEFIPFGSGRRSCPGMQLGLYGLEMAVAHLLHCFNWELPDGMRPSEMDMSDIFGLTAPRATRLVAVPTKRVLCPLL 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 36168289 36171766 + CePI673135_04g017080.1 Cec04g1708 201190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1708 519 Pfam Cytochrome P450 38 501 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1708 519 Coils Coil 340 360 - -
Cec04g1708 519 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1708 519 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1708 519 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1708 519 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1708 519 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1708 519 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1708 519 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1708 519 Gene3D Cytochrome P450 28 513 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1708 519 FunFam Cytochrome P450 84A1 30 512 - -
Cec04g1708 519 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1708 519 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1708 519 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1708 519 SUPERFAMILY Cytochrome P450 28 513 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec04g1708 519 PANTHER CYTOCHROME P450 84A1-RELATED 11 518 IPR053062 GO:0004497(PANTHER)
Cec04g1708 519 CDD CYP71-like 67 506 - -
Cec04g1708 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1616 Cec-Chr4:35505521 Cec04g1708 Cec-Chr4:36168289 7.20E-59 dispersed
Cec04g1708 Cec-Chr4:36168289 Cec07g1574 Cec-Chr7:31253301 8.50E-100 dispersed
Cec02g0499 Cec-Chr2:4655426 Cec04g1708 Cec-Chr4:36168289 2.10E-177 transposed
Cec03g0008 Cec-Chr3:116409 Cec04g1708 Cec-Chr4:36168289 2.40E-59 transposed
Cec06g1767 Cec-Chr6:31199527 Cec04g1708 Cec-Chr4:36168289 3.20E-91 transposed
Cec10g1963 Cec-Chr10:34419839 Cec04g1708 Cec-Chr4:36168289 2.60E-80 transposed
Cec04g1708 Cec-Chr4:36168289 Cec07g0971 Cec-Chr7:23909406 5.20E-158 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1708 K09755 - csv:101205783 864.374