Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1759 ATGGCCTCCTTTGCTGTGGTGCTATTCTCACACTTTGCAATTCTTTTGCTGTCTGTGTTGTCTTTGGGAAGTTCACTGAGCTTAGACTACTACGAGAAGACTTGCCCCGTTGCTGACTTTATCGTGACCAAAGCTGTCAGGTATGCAGCTTACAAAGACAAGACTGTGCCTGCTGCGCTCCTCCGGATGCACTTTCATGACTGCTTTATTAGGGGTTGTGATGCATCTGTACTGCTGAATTCAGTAGGGAACAACAAAGCAGAGAAAGATGGTCCACCTAATTTGTCTTTGCACTCATTTTTTGTGATCGACAACGCGAAGAAAGAACTGGAATCCTATTGCCCTGGTGTTGTCTCTTGTGCTGATATCTTGGCTCTGGCTGCAAGGGATGCAGTTGTGCTTTCTGGAGGTCCAACATGGGATGTTCCTAAAGGGAGAAAGGATGGAAGGATATCTAAGGCTAGTGAAACAATACAATTGCCATCTCCAAGCTTCAACATTTCTCAGCTGCAACAGAGCTTCTCCCAAAGGGGATTATCCTTGGACGACCTAGTTGCTCTTTCAGGAGCACACACCTTAGGATTTGCTCATTGCTCATCCTTTCAAGGTAGAATCCGCAACTTCAGTCCAGCCAGCAACGTCGACCCAGAAATGAATCCATCCTTCGCAGCAAGTCTAAGAAACATGTGCCCAGTGAACAACAAGGCAAAAAATGCTGGCTCTAACATGGATACTTCTCCAACCACATTTGACAACAATTACTACAGACTGATACTCCAAAATAAGGGCCTGTTTTCTGCTGATCAAGCTCTGCTCAGCTTTCCCAAGACCAAGAATCTTGTTTATAAGTTTGCAAGCTCAAAGGAAGCTTTTAACCGTGCATTTGTTAATTCTATGATCAAGATGAGTAGCATTACTGGAGGTCAGGAGATCAGGAAGAATTGTAGGGCAGTGAACTAA 960 44.69 MASFAVVLFSHFAILLLSVLSLGSSLSLDYYEKTCPVADFIVTKAVRYAAYKDKTVPAALLRMHFHDCFIRGCDASVLLNSVGNNKAEKDGPPNLSLHSFFVIDNAKKELESYCPGVVSCADILALAARDAVVLSGGPTWDVPKGRKDGRISKASETIQLPSPSFNISQLQQSFSQRGLSLDDLVALSGAHTLGFAHCSSFQGRIRNFSPASNVDPEMNPSFAASLRNMCPVNNKAKNAGSNMDTSPTTFDNNYYRLILQNKGLFSADQALLSFPKTKNLVYKFASSKEAFNRAFVNSMIKMSSITGGQEIRKNCRAVN 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 36569490 36570832 - CePI673135_04g017590.1 Cec04g1759 201241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1759 319 SUPERFAMILY Heme-dependent peroxidases 26 319 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1759 319 Gene3D Peroxidase, domain 2 161 302 - -
Cec04g1759 319 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1759 319 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1759 319 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1759 319 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1759 319 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1759 319 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1759 319 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1759 319 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1759 319 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1759 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Cec04g1759 319 Pfam Peroxidase 43 286 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1759 319 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1759 319 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1759 319 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1759 319 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1759 319 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1759 319 PANTHER PEROXIDASE 25-RELATED 20 315 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cec04g1759 319 Gene3D - 29 319 - -
Cec04g1759 319 FunFam Peroxidase 29 172 - -
Cec04g1759 319 CDD secretory_peroxidase 29 318 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cec04g1759 319 ProSiteProfiles Plant heme peroxidase family profile. 25 319 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec04g1759 319 FunFam Peroxidase 161 302 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1759 Cec-Chr4:36569490 Cec05g0928 Cec-Chr5:8107096 1.00E-95 dispersed
Cec04g1759 Cec-Chr4:36569490 Cec08g1461 Cec-Chr8:26365917 2.50E-118 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1759 K00430 - csv:101217954 595.119