Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1767 ATGTTATCCAGCTTGATGAACTTTCTGAGGGCTTGCTGGGTGCCGTCCTCGGACAGTATCGTACACAGTGGTTCAGATTCAGCAGGCCGTCATGAAGGCTTGCTATGGTACAAGGATATTGGACAGCACATGAATGGGGAATTTTCAATGGCTGTAGTCCAGGCCAATAACTTGCTTGAGGATCAGAGCCAGATCGAATCGGGTGCATTGAGCTTGCTCGACTCCGGGCCATATGGTACCTTTATTGGTGTCTATGATGGCCATGGTGGGCCTGAAGCATCAAATTACGTATATGAGAATCTTTTCCAGCATCTAAAAAGGTTCGCCTCAGAACAACAATCAATGTCATCTGATGTGATAAAGAAAGCATTTCAAGCCACAGAAGAAGGATTCATTTCTTTAGTGACTAAACAGTGGCAAATGAATCCCCAAATTGCAGCTGTTGGTTCATGTTGCCTGGTTGGTGTGATCTGTGGTGGCACCCTTTACATAGCCAACCTTGGCGATTCCCGTGCTGTGCTCGGAAGGCTCGTGCGATCAACTGAGGAGGTTATTGCCATGCAGCTATCAGCAGAGCATAATGTCAGCATAGAATCTGTCAGAAGGGAGATGCATTCTCTGCATCCAGATGACTCACATATAGTAGTTTTGAAGCATAATGTGTGGCGAGTAAAGGGCTTAATACAGGTTTCCAGATCTATCGGTGATGCATATCTAAAGAGGGCGGAATTCAACACGGAACCCTTGTATGCTAAGTTTAGGCTTCGTGAACCATTCACTCGACCAATATTGAGCTGTGAACCATCAATTTCAGTGTATGAGCTTCAACCACATGATCAATTCATCATATTTGCCTCTGATGGCCTGTGGGAGCACATTAGCAATCAACAGGCTGTCGATATTATTCAAAATCACCCGCATAATGGAAGTGCTAAGAGGCTGGTAAAAGCTGCTATGCTAGAAGCAGCTAAGAAACGAGAAATGCGATATTCAGATTTGAAGGATATTGATCGTGGAGTACGCCGCCACTTTCATGATGACATCACTGTCATAGTTGTATTTCTTGACTCTAATCTTCTCGTTGTGCCACACCTACAGAACTTAACACAGGCTGATGAACCGGTTGACTCGTGTTCTAGTTGTCATCCGCGGACAGCTGCTGTTCGATACTGTGATCGACGTTGA 1185 45.15 MLSSLMNFLRACWVPSSDSIVHSGSDSAGRHEGLLWYKDIGQHMNGEFSMAVVQANNLLEDQSQIESGALSLLDSGPYGTFIGVYDGHGGPEASNYVYENLFQHLKRFASEQQSMSSDVIKKAFQATEEGFISLVTKQWQMNPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRLVRSTEEVIAMQLSAEHNVSIESVRREMHSLHPDDSHIVVLKHNVWRVKGLIQVSRSIGDAYLKRAEFNTEPLYAKFRLREPFTRPILSCEPSISVYELQPHDQFIIFASDGLWEHISNQQAVDIIQNHPHNGSAKRLVKAAMLEAAKKREMRYSDLKDIDRGVRRHFHDDITVIVVFLDSNLLVVPHLQNLTQADEPVDSCSSCHPRTAAVRYCDRR 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 36615021 36617638 + CePI673135_04g017670.1 Cec04g1767 201249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1767 394 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169(InterPro)
Cec04g1767 394 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Cec04g1767 394 Gene3D - 37 361 IPR036457 -
Cec04g1767 394 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Cec04g1767 394 CDD PP2Cc 48 355 IPR001932 -
Cec04g1767 394 FunFam Phosphatase 2C family protein 36 364 - -
Cec04g1767 394 Pfam Protein phosphatase 2C 80 322 IPR001932 -
Cec04g1767 394 PANTHER PROTEIN PHOSPHATASE 41 354 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cec04g1767 394 SMART PP2C_4 41 353 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1269 Cec-Chr2:29348677 Cec04g1767 Cec-Chr4:36615021 4.80E-160 dispersed
Cec04g1767 Cec-Chr4:36615021 Cec10g2077 Cec-Chr10:35483190 4.90E-140 dispersed
Cec10g0049 Cec-Chr10:548057 Cec04g1767 Cec-Chr4:36615021 6.10E-167 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1767 K01102 - csv:101219696 679.093