Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1814 ATGAAATGGCGAAATGTGAGTGATGGAGAAGAGATTGAGATCTGGGTAAATGACATGTTTCAACAACAGAGTGCTCATAATTCAAGCTTTCTTCAAAACAACTTAGTAGTTCGTGATAAGCATATACCTTCTGATGCCTGCTTGATGGATCCCTCGAAGGGAAATAATGGTACCAGCAACAACCCAAATTTGGCCTCAAAGCAGAGACTGCGATGGACACATGATCTTCACGAACGGTTTGTTAATGCAGTGGCACAACTTGGTGGTCCAGATCGTGCTACACCCAAAGGCGTCCTTAGAGTAATGGGTGTTCAAGGTTTAACAATATACCACGTCAAAAGCCACCTACAGAAATATCGACTTGCAAAATACCTTCCCGACTCCTCATCTGATGGGAAAAAGGCTGACAAGAAGGATTCTAATGATATTCTATCAAACATTGATGGCTCGTCAGGAATGCAAATTACTGAAGCACTTAAGCTGCAGATGGAGGTCCAGAAGCGACTGCATGAACAATTGGAGGTACAGAGACAGCTACAGTTACGGATTGAAGCCCAAGGCAAGTACCTAAAGAAGATAATTGAAGAGCAACAAAAACTTAGTGGAGTTCTTTCAGGAGCTCCGGTTGCATCTGCCTTTTCAGCTCCTGCTTCTGGTGATAACTGCCCAGAAACTGATAAAAATGACCCTCCAACACCTGCACCCACATCTGAGTTTCCTCGCCAAGAGAAACCATCAAAGGAACATGCCCAAGCCAAGAGTGTCTCTATTGATGATTCTTTCTCGTCTCATCACGAACCGTTGACGCCAGATTCTGGTTGCCATAGCTCCCGGAGTGAGAGTCCAAGGCCAGTGAAGAAGCAAAGACAGTACAGGGATGGTGGATTTGCCAAATCAGAGATGATACTTGCACATCAGATACTGGAGTCAAGTTTAAACTCCACTCGTTTTTCCAGCCAGGGAAAAGTTTGA 972 44.44 MKWRNVSDGEEIEIWVNDMFQQQSAHNSSFLQNNLVVRDKHIPSDACLMDPSKGNNGTSNNPNLASKQRLRWTHDLHERFVNAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKADKKDSNDILSNIDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQKLSGVLSGAPVASAFSAPASGDNCPETDKNDPPTPAPTSEFPRQEKPSKEHAQAKSVSIDDSFSSHHEPLTPDSGCHSSRSESPRPVKKQRQYRDGGFAKSEMILAHQILESSLNSTRFSSQGKV 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 36902374 36905842 - CePI673135_04g018140.1 Cec04g1814 201296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1814 323 SUPERFAMILY Homeodomain-like 66 121 IPR009057 -
Cec04g1814 323 MobiDBLite consensus disorder prediction 280 294 - -
Cec04g1814 323 Gene3D - 66 125 - -
Cec04g1814 323 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 44 281 IPR046955 GO:0003700(InterPro)
Cec04g1814 323 NCBIfam myb-like DNA-binding domain, SHAQKYF class 67 122 IPR006447 GO:0003677(InterPro)
Cec04g1814 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 124 IPR017930 -
Cec04g1814 323 Pfam MYB-CC type transfactor, LHEQLE motif 153 199 IPR025756 -
Cec04g1814 323 MobiDBLite consensus disorder prediction 127 149 - -
Cec04g1814 323 FunFam Myb family transcription factor 66 124 - -
Cec04g1814 323 MobiDBLite consensus disorder prediction 255 279 - -
Cec04g1814 323 MobiDBLite consensus disorder prediction 214 297 - -
Cec04g1814 323 Pfam Myb-like DNA-binding domain 69 120 IPR001005 -
Cec04g1814 323 MobiDBLite consensus disorder prediction 127 143 - -
Cec04g1814 323 Coils Coil 156 176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1814 Cec-Chr4:36902374 Cec10g1707 Cec-Chr10:31556897 5.40E-44 dispersed
Cec04g1814 Cec-Chr4:36902374 Cec04g1815 Cec-Chr4:36909216 4.90E-21 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29405 PF00249 Myb_DNA-binding 1.10E-07 CL0123 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1814 - - - 0.0